RNA–Protein interactions for RNA: ENST00000615393.5

VEGFA-227, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 984 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-227ENST00000615393 BEX2Q9BXY8 128 aa21.62■■□□□ 1.05
VEGFA-227ENST00000615393 SHARPINQ9H0F6 387 aa21.62■■□□□ 1.05
VEGFA-227ENST00000615393 SLCO1C1Q9NYB5 712 aa21.62■■□□□ 1.05
VEGFA-227ENST00000615393 TAAR3PQ9P1P4 343 aa21.62■■□□□ 1.05
VEGFA-227ENST00000615393 YLPM1P49750 1951 aaKnown RBP21.61■■□□□ 1.05
VEGFA-227ENST00000615393 A0A1W2PPL8 197 aa21.61■■□□□ 1.05
VEGFA-227ENST00000615393 XKRYO14609 159 aa21.61■■□□□ 1.05
VEGFA-227ENST00000615393 CST2P09228 141 aa21.61■■□□□ 1.05
VEGFA-227ENST00000615393 NAT2P11245 290 aa21.61■■□□□ 1.05
VEGFA-227ENST00000615393 LAP3P28838 519 aa21.61■■□□□ 1.05
VEGFA-227ENST00000615393 KRT72Q14CN4 511 aa21.61■■□□□ 1.05
VEGFA-227ENST00000615393 UNQ6126/PRO20091Q6UXV3 157 aa21.61■■□□□ 1.05
VEGFA-227ENST00000615393 FOXL2NBQ6ZUU3 175 aa21.61■■□□□ 1.05
VEGFA-227ENST00000615393 ICA1LQ8NDH6 482 aa21.61■■□□□ 1.05
VEGFA-227ENST00000615393 SNX33Q8WV41 574 aa21.61■■□□□ 1.05
VEGFA-227ENST00000615393 HPS1Q92902 700 aa21.61■■□□□ 1.05
VEGFA-227ENST00000615393 FAM46AQ96IP4 442 aaKnown RBP21.61■■□□□ 1.05
VEGFA-227ENST00000615393 GORASP2Q9H8Y8 452 aa21.61■■□□□ 1.05
VEGFA-227ENST00000615393 KRCC1Q9NPI7 259 aaPredicted RBP21.61■■□□□ 1.05
VEGFA-227ENST00000615393 EIF3KQ9UBQ5 218 aaKnown RBP21.61■■□□□ 1.05
VEGFA-227ENST00000615393 JMJD1CQ15652 2540 aa21.61■■□□□ 1.05
VEGFA-227ENST00000615393 IGLV3-9A0A075B6K5 115 aa21.6■■□□□ 1.05
VEGFA-227ENST00000615393 LRP5LA4QPB2 252 aa21.6■■□□□ 1.05
VEGFA-227ENST00000615393 LYNX1G3V0Z9 82 aa21.6■■□□□ 1.05
VEGFA-227ENST00000615393 AHCYL1O43865 530 aa21.6■■□□□ 1.05
VEGFA-227ENST00000615393 CLPTM1O96005 669 aa21.6■■□□□ 1.05
VEGFA-227ENST00000615393 FAM157CP0CG43 387 aa21.6■■□□□ 1.05
VEGFA-227ENST00000615393 LYNX1P0DP58 116 aa21.6■■□□□ 1.05
VEGFA-227ENST00000615393 GDI2P50395 445 aaKnown RBP21.6■■□□□ 1.05
VEGFA-227ENST00000615393 ERVS71-1P61550 626 aa21.6■■□□□ 1.05
VEGFA-227ENST00000615393 GNGT1P63211 74 aa21.6■■□□□ 1.05
VEGFA-227ENST00000615393 MOGQ16653 247 aa21.6■■□□□ 1.05
VEGFA-227ENST00000615393 ELFN2Q5R3F8 820 aa21.6■■□□□ 1.05
VEGFA-227ENST00000615393 ALDH16A1Q8IZ83 802 aa21.6■■□□□ 1.05
VEGFA-227ENST00000615393 OR1J1Q8NGS3 322 aa21.6■■□□□ 1.05
VEGFA-227ENST00000615393 AKR7LQ8NHP1 331 aa21.6■■□□□ 1.05
VEGFA-227ENST00000615393 RDH5Q92781 318 aa21.6■■□□□ 1.05
VEGFA-227ENST00000615393 POM121L2Q96KW2 1035 aa21.6■■□□□ 1.05
VEGFA-227ENST00000615393 C7orf34Q96L11 122 aa21.6■■□□□ 1.05
VEGFA-227ENST00000615393 ZNF570Q96NI8 536 aa21.6■■□□□ 1.05
VEGFA-227ENST00000615393 MDFIQ99750 246 aa21.6■■□□□ 1.05
VEGFA-227ENST00000615393 CHODLQ9H9P2 273 aa21.6■■□□□ 1.05
VEGFA-227ENST00000615393 MAGEL2Q9UJ55 1249 aa21.6■■□□□ 1.05
VEGFA-227ENST00000615393 ADAM18Q9Y3Q7 739 aa21.6■■□□□ 1.05
VEGFA-227ENST00000615393 TIMM10BQ9Y5J6 103 aa21.6■■□□□ 1.05
VEGFA-227ENST00000615393 SONP18583 2426 aaKnown RBP21.59■■□□□ 1.05
VEGFA-227ENST00000615393 C5orf49A4QMS7 147 aa21.59■■□□□ 1.05
VEGFA-227ENST00000615393 H7C1C5 153 aa21.59■■□□□ 1.05
VEGFA-227ENST00000615393 LILRA1O75019 489 aa21.59■■□□□ 1.05
VEGFA-227ENST00000615393 HPXP02790 462 aa21.59■■□□□ 1.05
VEGFA-227ENST00000615393 ITGA2P17301 1181 aa21.59■■□□□ 1.05
VEGFA-227ENST00000615393 MSR1P21757 451 aa21.59■■□□□ 1.05
VEGFA-227ENST00000615393 ACHEP22303 614 aa21.59■■□□□ 1.05
VEGFA-227ENST00000615393 LCN6P62502 163 aa21.59■■□□□ 1.05
VEGFA-227ENST00000615393 PSG4Q00888 419 aa21.59■■□□□ 1.05
VEGFA-227ENST00000615393 ALKBH6Q3KRA9 238 aa21.59■■□□□ 1.05
VEGFA-227ENST00000615393 TMEM154Q6P9G4 183 aa21.59■■□□□ 1.05
VEGFA-227ENST00000615393 PGAM4Q8N0Y7 254 aa21.59■■□□□ 1.05
VEGFA-227ENST00000615393 SNX18Q96RF0 628 aa21.59■■□□□ 1.05
VEGFA-227ENST00000615393 OR2H1Q9GZK4 316 aa21.59■■□□□ 1.05
VEGFA-227ENST00000615393 HINT3Q9NQE9 182 aaKnown RBP21.59■■□□□ 1.05
VEGFA-227ENST00000615393 ARL2BPQ9Y2Y0 163 aa21.59■■□□□ 1.05
VEGFA-227ENST00000615393 C17orf100A8MU93 164 aa21.58■■□□□ 1.05
VEGFA-227ENST00000615393 NDUFB2O95178 105 aa21.58■■□□□ 1.05
VEGFA-227ENST00000615393 TGFAP01135 160 aa21.58■■□□□ 1.05
VEGFA-227ENST00000615393 HSD17B1P14061 328 aa21.58■■□□□ 1.05
VEGFA-227ENST00000615393 MRPS11P82912 194 aaKnown RBP21.58■■□□□ 1.05
VEGFA-227ENST00000615393 SAMD4BQ5PRF9 694 aaKnown RBP21.58■■□□□ 1.05
VEGFA-227ENST00000615393 SYT9Q86SS6 491 aa21.58■■□□□ 1.05
VEGFA-227ENST00000615393 FAM86B1Q8N7N1 296 aa21.58■■□□□ 1.05
VEGFA-227ENST00000615393 Q96M85 177 aa21.58■■□□□ 1.05
VEGFA-227ENST00000615393 LRRC37BQ96QE4 947 aa21.58■■□□□ 1.05
VEGFA-227ENST00000615393 WACQ9BTA9 647 aa21.58■■□□□ 1.05
VEGFA-227ENST00000615393 WNT5BQ9H1J7 359 aa21.58■■□□□ 1.05
VEGFA-227ENST00000615393 TAGLN3Q9UI15 199 aa21.58■■□□□ 1.05
VEGFA-227ENST00000615393 AURKCQ9UQB9 309 aa21.58■■□□□ 1.05
VEGFA-227ENST00000615393 LOC100509620A0A075B734 347 aa21.57■■□□□ 1.04
VEGFA-227ENST00000615393 C12orf71A8MTZ7 269 aa21.57■■□□□ 1.04
VEGFA-227ENST00000615393 DCTN3O75935 186 aa21.57■■□□□ 1.04
VEGFA-227ENST00000615393 MT-ND5P03915 603 aa21.57■■□□□ 1.04
VEGFA-227ENST00000615393 ZNF26P17031 533 aaPredicted RBP21.57■■□□□ 1.04
VEGFA-227ENST00000615393 IGFBP5P24593 272 aa21.57■■□□□ 1.04
VEGFA-227ENST00000615393 GPR6P46095 362 aaPredicted RBP21.57■■□□□ 1.04
VEGFA-227ENST00000615393 OMPP47874 163 aa21.57■■□□□ 1.04
VEGFA-227ENST00000615393 LIMS1P48059 325 aa21.57■■□□□ 1.04
VEGFA-227ENST00000615393 SMIM11AP58511 58 aa21.57■■□□□ 1.04
VEGFA-227ENST00000615393 PCGF3Q3KNV8 242 aa21.57■■□□□ 1.04
VEGFA-227ENST00000615393 MESTQ5EB52 335 aa21.57■■□□□ 1.04
VEGFA-227ENST00000615393 GPR139Q6DWJ6 353 aa21.57■■□□□ 1.04
VEGFA-227ENST00000615393 UGT2A3Q6UWM9 527 aa21.57■■□□□ 1.04
VEGFA-227ENST00000615393 FAM122BQ7Z309 247 aa21.57■■□□□ 1.04
VEGFA-227ENST00000615393 C1orf174Q8IYL3 243 aa21.57■■□□□ 1.04
VEGFA-227ENST00000615393 PYURFQ96I23 114 aa21.57■■□□□ 1.04
VEGFA-227ENST00000615393 RSRC1Q96IZ7 334 aaKnown RBP21.57■■□□□ 1.04
VEGFA-227ENST00000615393 DHRS1Q96LJ7 313 aa21.57■■□□□ 1.04
VEGFA-227ENST00000615393 POLE4Q9NR33 117 aa21.57■■□□□ 1.04
VEGFA-227ENST00000615393 SIGLEC7Q9Y286 467 aa21.57■■□□□ 1.04
VEGFA-227ENST00000615393 TRBV4-1A0A0J9YWV2 114 aa21.56■■□□□ 1.04
VEGFA-227ENST00000615393 PRSS37A4D1T9 235 aa21.56■■□□□ 1.04
VEGFA-227ENST00000615393 PTP4A3O75365 173 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms