RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 MUC20Q8N307 709 aaPredicted RBP14.62□□□□□ -0.07
CHMP4A-211ENST00000609024 NOXO1Q8NFA2 376 aa14.62□□□□□ -0.07
CHMP4A-211ENST00000609024 OR9I1Q8NGQ6 314 aa14.62□□□□□ -0.07
CHMP4A-211ENST00000609024 GTF2H4Q92759 462 aa14.62□□□□□ -0.07
CHMP4A-211ENST00000609024 THOC1Q96FV9 657 aaKnown RBP14.62□□□□□ -0.07
CHMP4A-211ENST00000609024 SLC30A2Q9BRI3 323 aa14.62□□□□□ -0.07
CHMP4A-211ENST00000609024 ELOVL3Q9HB03 270 aa14.62□□□□□ -0.07
CHMP4A-211ENST00000609024 SLCO1B3Q9NPD5 702 aa14.62□□□□□ -0.07
CHMP4A-211ENST00000609024 TNFRSF19Q9NS68 423 aa14.62□□□□□ -0.07
CHMP4A-211ENST00000609024 THAP1Q9NVV9 213 aa14.62□□□□□ -0.07
CHMP4A-211ENST00000609024 ARMCX1Q9P291 453 aa14.62□□□□□ -0.07
CHMP4A-211ENST00000609024 STX18Q9P2W9 335 aaKnown RBP14.62□□□□□ -0.07
CHMP4A-211ENST00000609024 CORO2BQ9UQ03 480 aa14.62□□□□□ -0.07
CHMP4A-211ENST00000609024 CPSF4LA6NMK7 179 aaKnown RBP14.61□□□□□ -0.07
CHMP4A-211ENST00000609024 EVPLLA8MZ36 301 aa14.61□□□□□ -0.07
CHMP4A-211ENST00000609024 H3BSA7 217 aa14.61□□□□□ -0.07
CHMP4A-211ENST00000609024 SURF4O15260 269 aa14.61□□□□□ -0.07
CHMP4A-211ENST00000609024 HOXA3O43365 443 aaPredicted RBP14.61□□□□□ -0.07
CHMP4A-211ENST00000609024 FMO6PO60774 539 aa14.61□□□□□ -0.07
CHMP4A-211ENST00000609024 CD55P08174 381 aa14.61□□□□□ -0.07
CHMP4A-211ENST00000609024 IGHV4-38-2P0DP08 117 aa14.61□□□□□ -0.07
CHMP4A-211ENST00000609024 NR2C1P13056 603 aa14.61□□□□□ -0.07
CHMP4A-211ENST00000609024 ZNF32P17041 273 aa14.61□□□□□ -0.07
CHMP4A-211ENST00000609024 STX1BP61266 288 aa14.61□□□□□ -0.07
CHMP4A-211ENST00000609024 SEC61A1P61619 476 aaKnown RBP14.61□□□□□ -0.07
CHMP4A-211ENST00000609024 LRRC28Q86X40 367 aaPredicted RBP14.61□□□□□ -0.07
CHMP4A-211ENST00000609024 OR2Z1Q8NG97 314 aa14.61□□□□□ -0.07
CHMP4A-211ENST00000609024 WFDC12Q8WWY7 111 aa14.61□□□□□ -0.07
CHMP4A-211ENST00000609024 POM121L2Q96KW2 1035 aa14.61□□□□□ -0.07
CHMP4A-211ENST00000609024 SAMD8Q96LT4 415 aa14.61□□□□□ -0.07
CHMP4A-211ENST00000609024 ARHGDIGQ99819 225 aa14.61□□□□□ -0.07
CHMP4A-211ENST00000609024 PDP1Q9P0J1 537 aaPredicted RBP14.61□□□□□ -0.07
CHMP4A-211ENST00000609024 ANGPT4Q9Y264 503 aa14.61□□□□□ -0.07
CHMP4A-211ENST00000609024 LRCH1Q9Y2L9 728 aa14.61□□□□□ -0.07
CHMP4A-211ENST00000609024 TANC2Q9HCD6 1990 aa14.6□□□□□ -0.07
CHMP4A-211ENST00000609024 TRAV40A0A0B4J280 105 aa14.6□□□□□ -0.07
CHMP4A-211ENST00000609024 GMNCA6NCL1 334 aa14.6□□□□□ -0.07
CHMP4A-211ENST00000609024 FAM181BA6NEQ2 426 aa14.6□□□□□ -0.07
CHMP4A-211ENST00000609024 A8MXK9 166 aa14.6□□□□□ -0.07
CHMP4A-211ENST00000609024 CENPBD1B2RD01 187 aa14.6□□□□□ -0.07
CHMP4A-211ENST00000609024 PPIAL4GP0DN37 164 aa14.6□□□□□ -0.07
CHMP4A-211ENST00000609024 ACADSP16219 412 aa14.6□□□□□ -0.07
CHMP4A-211ENST00000609024 GSTM3P21266 225 aa14.6□□□□□ -0.07
CHMP4A-211ENST00000609024 MDH2P40926 338 aaKnown RBP14.6□□□□□ -0.07
CHMP4A-211ENST00000609024 WNT5AP41221 380 aa14.6□□□□□ -0.07
CHMP4A-211ENST00000609024 DAP3P51398 398 aaKnown RBP14.6□□□□□ -0.07
CHMP4A-211ENST00000609024 MRPS34P82930 218 aaKnown RBP14.6□□□□□ -0.07
CHMP4A-211ENST00000609024 PAX8Q06710 450 aa14.6□□□□□ -0.07
CHMP4A-211ENST00000609024 SRSF4Q08170 494 aaKnown RBP14.6□□□□□ -0.07
CHMP4A-211ENST00000609024 TTMPQ5BVD1 217 aa14.6□□□□□ -0.07
CHMP4A-211ENST00000609024 OLFML2AQ68BL7 652 aa14.6□□□□□ -0.07
CHMP4A-211ENST00000609024 C9orf139Q6ZV77 190 aa14.6□□□□□ -0.07
CHMP4A-211ENST00000609024 AKR7LQ8NHP1 331 aa14.6□□□□□ -0.07
CHMP4A-211ENST00000609024 PLEKHA8Q96JA3 519 aa14.6□□□□□ -0.07
CHMP4A-211ENST00000609024 SSBP3Q9BWW4 388 aaPredicted RBP14.6□□□□□ -0.07
CHMP4A-211ENST00000609024 DCAF16Q9NXF7 216 aa14.6□□□□□ -0.07
CHMP4A-211ENST00000609024 PPP1R3CQ9UQK1 317 aa14.6□□□□□ -0.07
CHMP4A-211ENST00000609024 NOTCH1P46531 2555 aa14.59□□□□□ -0.07
CHMP4A-211ENST00000609024 M0R3H8 397 aa14.59□□□□□ -0.07
CHMP4A-211ENST00000609024 TPST2O60704 377 aa14.59□□□□□ -0.07
CHMP4A-211ENST00000609024 F13BP05160 661 aa14.59□□□□□ -0.07
CHMP4A-211ENST00000609024 RPS2P15880 293 aaKnown RBP14.59□□□□□ -0.07
CHMP4A-211ENST00000609024 CDAP32320 146 aa14.59□□□□□ -0.07
CHMP4A-211ENST00000609024 CD80P33681 288 aa14.59□□□□□ -0.07
CHMP4A-211ENST00000609024 GNB2P62879 340 aa14.59□□□□□ -0.07
CHMP4A-211ENST00000609024 ERVK-25P63136 954 aa14.59□□□□□ -0.07
CHMP4A-211ENST00000609024 CD47Q08722 323 aa14.59□□□□□ -0.07
CHMP4A-211ENST00000609024 ZMYND11Q15326 602 aa14.59□□□□□ -0.07
CHMP4A-211ENST00000609024 HIST3H3Q16695 136 aa14.59□□□□□ -0.07
CHMP4A-211ENST00000609024 ENTPD8Q5MY95 495 aa14.59□□□□□ -0.07
CHMP4A-211ENST00000609024 FAM205BPQ63HN1 556 aa14.59□□□□□ -0.07
CHMP4A-211ENST00000609024 FIP1L1Q6UN15 594 aaKnown RBP14.59□□□□□ -0.07
CHMP4A-211ENST00000609024 LINC00114Q6XXX2 140 aa14.59□□□□□ -0.07
CHMP4A-211ENST00000609024 RFPL4BQ6ZWI9 263 aa14.59□□□□□ -0.07
CHMP4A-211ENST00000609024 ZNF283Q8N7M2 679 aa14.59□□□□□ -0.07
CHMP4A-211ENST00000609024 ANKRD42Q8N9B4 389 aa14.59□□□□□ -0.07
CHMP4A-211ENST00000609024 SMYD1Q8NB12 490 aa14.59□□□□□ -0.07
CHMP4A-211ENST00000609024 NSMAFQ92636 917 aa14.59□□□□□ -0.07
CHMP4A-211ENST00000609024 C4orf45Q96LM5 186 aa14.59□□□□□ -0.07
CHMP4A-211ENST00000609024 MAGEB18Q96M61 343 aa14.59□□□□□ -0.07
CHMP4A-211ENST00000609024 TMEM109Q9BVC6 243 aa14.59□□□□□ -0.07
CHMP4A-211ENST00000609024 MAN2C1Q9NTJ4 1040 aa14.59□□□□□ -0.07
CHMP4A-211ENST00000609024 KIF17Q9P2E2 1029 aa14.59□□□□□ -0.07
CHMP4A-211ENST00000609024 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.59□□□□□ -0.07
CHMP4A-211ENST00000609024 SLC7A7Q9UM01 511 aa14.59□□□□□ -0.07
CHMP4A-211ENST00000609024 ZNF281Q9Y2X9 895 aa14.59□□□□□ -0.07
CHMP4A-211ENST00000609024 LOC100509620A0A075B734 347 aa14.58□□□□□ -0.08
CHMP4A-211ENST00000609024 CLPSL1A2RUU4 121 aa14.58□□□□□ -0.08
CHMP4A-211ENST00000609024 SRRM5B3KS81 715 aa14.58□□□□□ -0.08
CHMP4A-211ENST00000609024 TRMUO75648 421 aaKnown RBP14.58□□□□□ -0.08
CHMP4A-211ENST00000609024 CPT2P23786 658 aa14.58□□□□□ -0.08
CHMP4A-211ENST00000609024 PCBD1P61457 104 aa14.58□□□□□ -0.08
CHMP4A-211ENST00000609024 PSG4Q00888 419 aa14.58□□□□□ -0.08
CHMP4A-211ENST00000609024 CDK5R2Q13319 367 aa14.58□□□□□ -0.08
CHMP4A-211ENST00000609024 PDCD1Q15116 288 aa14.58□□□□□ -0.08
CHMP4A-211ENST00000609024 SPRNQ5BIV9 151 aa14.58□□□□□ -0.08
CHMP4A-211ENST00000609024 C10orf128Q5T292 105 aa14.58□□□□□ -0.08
CHMP4A-211ENST00000609024 ADAMTS16Q8TE57 1224 aa14.58□□□□□ -0.08
CHMP4A-211ENST00000609024 UPRTQ96BW1 309 aa14.58□□□□□ -0.08
CHMP4A-211ENST00000609024 MPP4Q96JB8 637 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms