RNA–Protein interactions for RNA: ENST00000600948.5

PLD3-223, Transcript of phospholipase D family member 3, human

TSL 2

Gene PLD3, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLD3-223	ENST00000600948	SYNGR3	O43761	229 aa		13.31	□□□□□ -0.28
PLD3-223	ENST00000600948	AHCYL1	O43865	530 aa		13.31	□□□□□ -0.28
PLD3-223	ENST00000600948	CST2	P09228	141 aa		13.31	□□□□□ -0.28
PLD3-223	ENST00000600948	FAM157B	P0CG42	384 aa		13.31	□□□□□ -0.28
PLD3-223	ENST00000600948	APEX1	P27695	318 aa	Known RBP	13.31	□□□□□ -0.28
PLD3-223	ENST00000600948	LAP3	P28838	519 aa		13.31	□□□□□ -0.28
PLD3-223	ENST00000600948	SDHA	P31040	664 aa		13.31	□□□□□ -0.28
PLD3-223	ENST00000600948	RRM2	P31350	389 aa		13.31	□□□□□ -0.28
PLD3-223	ENST00000600948	HSF2	Q03933	536 aa		13.31	□□□□□ -0.28
PLD3-223	ENST00000600948	LOXL1	Q08397	574 aa	Predicted RBP	13.31	□□□□□ -0.28
PLD3-223	ENST00000600948	KRR1	Q13601	381 aa	Known RBP	13.31	□□□□□ -0.28
PLD3-223	ENST00000600948	ENDOG	Q14249	297 aa	Known RBP	13.31	□□□□□ -0.28
PLD3-223	ENST00000600948	KRTAP21-3	Q3LHN1	58 aa		13.31	□□□□□ -0.28
PLD3-223	ENST00000600948	GPR139	Q6DWJ6	353 aa		13.31	□□□□□ -0.28
PLD3-223	ENST00000600948	SYT3	Q9BQG1	590 aa		13.31	□□□□□ -0.28
PLD3-223	ENST00000600948	WNT5B	Q9H1J7	359 aa		13.31	□□□□□ -0.28
PLD3-223	ENST00000600948	DYNLRB1	Q9NP97	96 aa		13.31	□□□□□ -0.28
PLD3-223	ENST00000600948	MYOZ1	Q9NP98	299 aa	Predicted RBP	13.31	□□□□□ -0.28
PLD3-223	ENST00000600948	MYEF2	Q9P2K5	600 aa	Known RBP	13.31	□□□□□ -0.28
PLD3-223	ENST00000600948	IL20RA	Q9UHF4	553 aa		13.31	□□□□□ -0.28
PLD3-223	ENST00000600948	ADAM21	Q9UKJ8	722 aa		13.31	□□□□□ -0.28
PLD3-223	ENST00000600948	FZR1	Q9UM11	496 aa		13.31	□□□□□ -0.28
PLD3-223	ENST00000600948	ABCA2	Q9BZC7	2435 aa		13.31	□□□□□ -0.28
PLD3-223	ENST00000600948	TCRBV5S2	A0A599	114 aa		13.3	□□□□□ -0.28
PLD3-223	ENST00000600948	INAFM1	C9JVW0	142 aa		13.3	□□□□□ -0.28
PLD3-223	ENST00000600948	TXNDC12	O95881	172 aa		13.3	□□□□□ -0.28
PLD3-223	ENST00000600948	SCG5	P05408	212 aa		13.3	□□□□□ -0.28
PLD3-223	ENST00000600948	ADRA2A	P08913	450 aa		13.3	□□□□□ -0.28
PLD3-223	ENST00000600948	CTLA4	P16410	223 aa		13.3	□□□□□ -0.28
PLD3-223	ENST00000600948	MSR1	P21757	451 aa		13.3	□□□□□ -0.28
PLD3-223	ENST00000600948	PCSK6	P29122	969 aa		13.3	□□□□□ -0.28
PLD3-223	ENST00000600948	APLNR	P35414	380 aa		13.3	□□□□□ -0.28
PLD3-223	ENST00000600948	PSG4	Q00888	419 aa		13.3	□□□□□ -0.28
PLD3-223	ENST00000600948	MTX3	Q5HYI7	312 aa		13.3	□□□□□ -0.28
PLD3-223	ENST00000600948	LCN8	Q6JVE9	175 aa		13.3	□□□□□ -0.28
PLD3-223	ENST00000600948	RGS7BP	Q6MZT1	257 aa	Predicted RBP	13.3	□□□□□ -0.28
PLD3-223	ENST00000600948	DPY19L2P2	Q6ZN68	376 aa		13.3	□□□□□ -0.28
PLD3-223	ENST00000600948	AKR7L	Q8NHP1	331 aa		13.3	□□□□□ -0.28
PLD3-223	ENST00000600948	NEU4	Q8WWR8	484 aa	Predicted RBP	13.3	□□□□□ -0.28
PLD3-223	ENST00000600948	POM121L2	Q96KW2	1035 aa		13.3	□□□□□ -0.28
PLD3-223	ENST00000600948	OR2H1	Q9GZK4	316 aa		13.3	□□□□□ -0.28
PLD3-223	ENST00000600948	LRMDA	Q9H2I8	198 aa		13.3	□□□□□ -0.28
PLD3-223	ENST00000600948	MUC13	Q9H3R2	512 aa		13.3	□□□□□ -0.28
PLD3-223	ENST00000600948	POLE4	Q9NR33	117 aa		13.3	□□□□□ -0.28
PLD3-223	ENST00000600948	IER3IP1	Q9Y5U9	82 aa		13.3	□□□□□ -0.28
PLD3-223	ENST00000600948	MALRD1	Q5VYJ5	2156 aa		13.3	□□□□□ -0.28
PLD3-223	ENST00000600948	JMJD1C	Q15652	2540 aa		13.29	□□□□□ -0.28
PLD3-223	ENST00000600948	LOC100509620	A0A075B734	347 aa		13.29	□□□□□ -0.28
PLD3-223	ENST00000600948		M0R233	179 aa		13.29	□□□□□ -0.28
PLD3-223	ENST00000600948	NDUFS8	O00217	210 aa		13.29	□□□□□ -0.28
PLD3-223	ENST00000600948	IMPA2	O14732	288 aa		13.29	□□□□□ -0.28
PLD3-223	ENST00000600948	CD5L	O43866	347 aa		13.29	□□□□□ -0.28
PLD3-223	ENST00000600948	OR10H3	O60404	316 aa		13.29	□□□□□ -0.28
PLD3-223	ENST00000600948	TP53	P04637	393 aa	Predicted RBP	13.29	□□□□□ -0.28
PLD3-223	ENST00000600948	ERCC1	P07992	297 aa	Predicted RBP	13.29	□□□□□ -0.28
PLD3-223	ENST00000600948	FPR3	P25089	353 aa		13.29	□□□□□ -0.28
PLD3-223	ENST00000600948	STOM	P27105	288 aa		13.29	□□□□□ -0.28
PLD3-223	ENST00000600948	GUCA1A	P43080	201 aa	Predicted RBP	13.29	□□□□□ -0.28
PLD3-223	ENST00000600948	MAGEA2	P43356	314 aa		13.29	□□□□□ -0.28
PLD3-223	ENST00000600948	GSS	P48637	474 aa		13.29	□□□□□ -0.28
PLD3-223	ENST00000600948	ERVS71-1	P61550	626 aa		13.29	□□□□□ -0.28
PLD3-223	ENST00000600948	MS4A2	Q01362	244 aa		13.29	□□□□□ -0.28
PLD3-223	ENST00000600948	TRIM25	Q14258	630 aa	Known RBP	13.29	□□□□□ -0.28
PLD3-223	ENST00000600948	MAD2L1BP	Q15013	274 aa	Predicted RBP	13.29	□□□□□ -0.28
PLD3-223	ENST00000600948	TMEM249	Q2WGJ8	235 aa		13.29	□□□□□ -0.28
PLD3-223	ENST00000600948	SMARCD3	Q6STE5	483 aa		13.29	□□□□□ -0.28
PLD3-223	ENST00000600948	UGT2A3	Q6UWM9	527 aa		13.29	□□□□□ -0.28
PLD3-223	ENST00000600948	PTCHD4	Q6ZW05	846 aa		13.29	□□□□□ -0.28
PLD3-223	ENST00000600948	ADCK1	Q86TW2	530 aa		13.29	□□□□□ -0.28
PLD3-223	ENST00000600948	FANK1	Q8TC84	345 aa		13.29	□□□□□ -0.28
PLD3-223	ENST00000600948	FOXN4	Q96NZ1	517 aa		13.29	□□□□□ -0.28
PLD3-223	ENST00000600948	PIMREG	Q9BSJ6	248 aa		13.29	□□□□□ -0.28
PLD3-223	ENST00000600948	ZNF416	Q9BWM5	594 aa		13.29	□□□□□ -0.28
PLD3-223	ENST00000600948	SYT4	Q9H2B2	425 aa		13.29	□□□□□ -0.28
PLD3-223	ENST00000600948	OR51B6	Q9H340	312 aa		13.29	□□□□□ -0.28
PLD3-223	ENST00000600948	TPK1	Q9H3S4	243 aa		13.29	□□□□□ -0.28
PLD3-223	ENST00000600948	TAS2R1	Q9NYW7	299 aa		13.29	□□□□□ -0.28
PLD3-223	ENST00000600948	VSX1	Q9NZR4	365 aa	Predicted RBP	13.29	□□□□□ -0.28
PLD3-223	ENST00000600948	PRPF19	Q9UMS4	504 aa	Known RBP	13.29	□□□□□ -0.28
PLD3-223	ENST00000600948	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	13.28	□□□□□ -0.28	5e-14	■□□□□ 9.3
PLD3-223	ENST00000600948	IGLV3-9	A0A075B6K5	115 aa		13.28	□□□□□ -0.28
PLD3-223	ENST00000600948	LOC390937	A0A1W2PQ73	354 aa		13.28	□□□□□ -0.28
PLD3-223	ENST00000600948	SOCS2	O14508	198 aa		13.28	□□□□□ -0.28
PLD3-223	ENST00000600948	PPP1R3D	O95685	299 aa		13.28	□□□□□ -0.28
PLD3-223	ENST00000600948	CLPTM1	O96005	669 aa		13.28	□□□□□ -0.28
PLD3-223	ENST00000600948	APEH	P13798	732 aa	Known RBP	13.28	□□□□□ -0.28
PLD3-223	ENST00000600948	DAO	P14920	347 aa		13.28	□□□□□ -0.28
PLD3-223	ENST00000600948	ZNF250	P15622	560 aa		13.28	□□□□□ -0.28
PLD3-223	ENST00000600948	USF1	P22415	310 aa	Predicted RBP	13.28	□□□□□ -0.28
PLD3-223	ENST00000600948	WNT5A	P41221	380 aa		13.28	□□□□□ -0.28
PLD3-223	ENST00000600948	CDKN2A	P42771	156 aa	Known RBP	13.28	□□□□□ -0.28
PLD3-223	ENST00000600948	RAD52	P43351	418 aa		13.28	□□□□□ -0.28
PLD3-223	ENST00000600948	ALDH3B1	P43353	468 aa		13.28	□□□□□ -0.28
PLD3-223	ENST00000600948	NR4A2	P43354	598 aa		13.28	□□□□□ -0.28
PLD3-223	ENST00000600948	RPS6KA3	P51812	740 aa		13.28	□□□□□ -0.28
PLD3-223	ENST00000600948	HMGA2	P52926	109 aa		13.28	□□□□□ -0.28
PLD3-223	ENST00000600948	UCP2	P55851	309 aa		13.28	□□□□□ -0.28
PLD3-223	ENST00000600948	PCBD1	P61457	104 aa		13.28	□□□□□ -0.28
PLD3-223	ENST00000600948	PPP2R2B	Q00005	443 aa		13.28	□□□□□ -0.28
PLD3-223	ENST00000600948	CARTPT	Q16568	116 aa		13.28	□□□□□ -0.28

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