RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 NANOGNBQ7Z5D8 188 aa8.41□□□□□ -1.06
LIG1-209ENST00000596104 MPP4Q96JB8 637 aa8.41□□□□□ -1.06
LIG1-209ENST00000596104 GPA33Q99795 319 aa8.41□□□□□ -1.06
LIG1-209ENST00000596104 PRSS27Q9BQR3 290 aa8.41□□□□□ -1.06
LIG1-209ENST00000596104 EGLN1Q9GZT9 426 aa8.41□□□□□ -1.06
LIG1-209ENST00000596104 PCDHAC1Q9H158 963 aa8.41□□□□□ -1.06
LIG1-209ENST00000596104 PATZ1Q9HBE1 687 aaKnown RBP8.41□□□□□ -1.06
LIG1-209ENST00000596104 CYSLTR2Q9NS75 346 aa8.41□□□□□ -1.06
LIG1-209ENST00000596104 CCDC167Q9P0B6 97 aa8.41□□□□□ -1.06
LIG1-209ENST00000596104 CGGBP1Q9UFW8 167 aaPredicted RBP8.41□□□□□ -1.06
LIG1-209ENST00000596104 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.41□□□□□ -1.06
LIG1-209ENST00000596104 SLC7A7Q9UM01 511 aa8.41□□□□□ -1.06
LIG1-209ENST00000596104 CORO2BQ9UQ03 480 aa8.41□□□□□ -1.06
LIG1-209ENST00000596104 ANGPT4Q9Y264 503 aa8.41□□□□□ -1.06
LIG1-209ENST00000596104 INSIG2Q9Y5U4 225 aa8.41□□□□□ -1.06
LIG1-209ENST00000596104 NPTNQ9Y639 398 aa8.41□□□□□ -1.06
LIG1-209ENST00000596104 AUP1Q9Y679 476 aa8.41□□□□□ -1.06
LIG1-209ENST00000596104 USH1CQ9Y6N9 552 aa8.41□□□□□ -1.06
LIG1-209ENST00000596104 V9GYY5 206 aaPredicted RBP8.41□□□□□ -1.06
LIG1-209ENST00000596104 C5orf49A4QMS7 147 aa8.4□□□□□ -1.06
LIG1-209ENST00000596104 A8MXK9 166 aa8.4□□□□□ -1.06
LIG1-209ENST00000596104 EVPLLA8MZ36 301 aa8.4□□□□□ -1.06
LIG1-209ENST00000596104 F5H0A9 414 aaPredicted RBP8.4□□□□□ -1.06
LIG1-209ENST00000596104 BLOC1S5-TXNDC5H3BN57 136 aa8.4□□□□□ -1.06
LIG1-209ENST00000596104 H3BSA7 217 aa8.4□□□□□ -1.06
LIG1-209ENST00000596104 SLC2A10O95528 541 aa8.4□□□□□ -1.06
LIG1-209ENST00000596104 NGFP01138 241 aa8.4□□□□□ -1.06
LIG1-209ENST00000596104 HIST1H2ABP04908 130 aa8.4□□□□□ -1.06
LIG1-209ENST00000596104 SBK2P0C263 348 aa8.4□□□□□ -1.06
LIG1-209ENST00000596104 TSPAN19P0C672 248 aa8.4□□□□□ -1.06
LIG1-209ENST00000596104 UMPSP11172 480 aa8.4□□□□□ -1.06
LIG1-209ENST00000596104 CD247P20963 164 aa8.4□□□□□ -1.06
LIG1-209ENST00000596104 LIPAP38571 399 aa8.4□□□□□ -1.06
LIG1-209ENST00000596104 SLC6A9P48067 706 aa8.4□□□□□ -1.06
LIG1-209ENST00000596104 GDI2P50395 445 aaKnown RBP8.4□□□□□ -1.06
LIG1-209ENST00000596104 SEC61A1P61619 476 aaKnown RBP8.4□□□□□ -1.06
LIG1-209ENST00000596104 PPP1CBP62140 327 aa8.4□□□□□ -1.06
LIG1-209ENST00000596104 PSG4Q00888 419 aa8.4□□□□□ -1.06
LIG1-209ENST00000596104 RPL18Q07020 188 aaKnown RBP8.4□□□□□ -1.06
LIG1-209ENST00000596104 BAMBIQ13145 260 aa8.4□□□□□ -1.06
LIG1-209ENST00000596104 TMEM155Q4W5P6 130 aa8.4□□□□□ -1.06
LIG1-209ENST00000596104 HIST3H2AQ7L7L0 130 aa8.4□□□□□ -1.06
LIG1-209ENST00000596104 ZNF283Q8N7M2 679 aa8.4□□□□□ -1.06
LIG1-209ENST00000596104 C11orf65Q8NCR3 313 aa8.4□□□□□ -1.06
LIG1-209ENST00000596104 AKR7LQ8NHP1 331 aa8.4□□□□□ -1.06
LIG1-209ENST00000596104 VANGL1Q8TAA9 524 aaPredicted RBP8.4□□□□□ -1.06
LIG1-209ENST00000596104 HDAC2Q92769 488 aaKnown RBP8.4□□□□□ -1.06
LIG1-209ENST00000596104 TAF15Q92804 592 aaKnown RBP eCLIP8.4□□□□□ -1.06
LIG1-209ENST00000596104 HIST1H2ACQ93077 130 aa8.4□□□□□ -1.06
LIG1-209ENST00000596104 DIRC2Q96SL1 478 aa8.4□□□□□ -1.06
LIG1-209ENST00000596104 PARD6BQ9BYG5 372 aa8.4□□□□□ -1.06
LIG1-209ENST00000596104 SLITRK2Q9H156 845 aa8.4□□□□□ -1.06
LIG1-209ENST00000596104 WNT5BQ9H1J7 359 aa8.4□□□□□ -1.06
LIG1-209ENST00000596104 SMURF2Q9HAU4 748 aa8.4□□□□□ -1.06
LIG1-209ENST00000596104 MSL2Q9HCI7 577 aa8.4□□□□□ -1.06
LIG1-209ENST00000596104 CCNB1IP1Q9NPC3 277 aa8.4□□□□□ -1.06
LIG1-209ENST00000596104 TMEM106BQ9NUM4 274 aa8.4□□□□□ -1.06
LIG1-209ENST00000596104 EIF3KQ9UBQ5 218 aaKnown RBP8.4□□□□□ -1.06
LIG1-209ENST00000596104 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.4□□□□□ -1.06
LIG1-209ENST00000596104 EGFL7Q9UHF1 273 aa8.4□□□□□ -1.06
LIG1-209ENST00000596104 ZDHHC8Q9ULC8 765 aa8.4□□□□□ -1.06
LIG1-209ENST00000596104 A0A1W2PRG6 482 aa8.39□□□□□ -1.07
LIG1-209ENST00000596104 NPIPB13A6NJU9 1138 aa8.39□□□□□ -1.07
LIG1-209ENST00000596104 NPIPB4C9JG80 1138 aa8.39□□□□□ -1.07
LIG1-209ENST00000596104 MCIDASD6RGH6 385 aa8.39□□□□□ -1.07
LIG1-209ENST00000596104 POLR3GO15318 223 aaPredicted RBP8.39□□□□□ -1.07
LIG1-209ENST00000596104 OR7A10O76100 309 aa8.39□□□□□ -1.07
LIG1-209ENST00000596104 AQP2P41181 271 aa8.39□□□□□ -1.07
LIG1-209ENST00000596104 IDH3AP50213 366 aa8.39□□□□□ -1.07
LIG1-209ENST00000596104 DAP3P51398 398 aaKnown RBP8.39□□□□□ -1.07
LIG1-209ENST00000596104 CRYBA2P53672 197 aa8.39□□□□□ -1.07
LIG1-209ENST00000596104 TNFAIP6P98066 277 aaPredicted RBP8.39□□□□□ -1.07
LIG1-209ENST00000596104 PAX8Q06710 450 aa8.39□□□□□ -1.07
LIG1-209ENST00000596104 FMODQ06828 376 aa8.39□□□□□ -1.07
LIG1-209ENST00000596104 CDK5R2Q13319 367 aa8.39□□□□□ -1.07
LIG1-209ENST00000596104 SELPLGQ14242 412 aa8.39□□□□□ -1.07
LIG1-209ENST00000596104 SLC9A3R2Q15599 337 aa8.39□□□□□ -1.07
LIG1-209ENST00000596104 OCLNQ16625 522 aa8.39□□□□□ -1.07
LIG1-209ENST00000596104 MIDNQ504T8 468 aa8.39□□□□□ -1.07
LIG1-209ENST00000596104 RUNDC3AQ59EK9 446 aa8.39□□□□□ -1.07
LIG1-209ENST00000596104 MTX3Q5HYI7 312 aa8.39□□□□□ -1.07
LIG1-209ENST00000596104 FAM27BQ5VT28 67 aa8.39□□□□□ -1.07
LIG1-209ENST00000596104 LEG1Q6P5S2 330 aa8.39□□□□□ -1.07
LIG1-209ENST00000596104 SLC25A47Q6Q0C1 308 aa8.39□□□□□ -1.07
LIG1-209ENST00000596104 UNQ6126/PRO20091Q6UXV3 157 aa8.39□□□□□ -1.07
LIG1-209ENST00000596104 HDDC2Q7Z4H3 204 aa8.39□□□□□ -1.07
LIG1-209ENST00000596104 CROCCP2Q86T23 111 aa8.39□□□□□ -1.07
LIG1-209ENST00000596104 LRRC28Q86X40 367 aaPredicted RBP8.39□□□□□ -1.07
LIG1-209ENST00000596104 C1orf174Q8IYL3 243 aa8.39□□□□□ -1.07
LIG1-209ENST00000596104 SPICQ8N5J4 248 aa8.39□□□□□ -1.07
LIG1-209ENST00000596104 MOSPD2Q8NHP6 518 aa8.39□□□□□ -1.07
LIG1-209ENST00000596104 ABHD4Q8TB40 342 aa8.39□□□□□ -1.07
LIG1-209ENST00000596104 SLC25A28Q96A46 364 aa8.39□□□□□ -1.07
LIG1-209ENST00000596104 TAMM41Q96BW9 452 aa8.39□□□□□ -1.07
LIG1-209ENST00000596104 SIGLEC11Q96RL6 698 aa8.39□□□□□ -1.07
LIG1-209ENST00000596104 DCLRE1CQ96SD1 692 aaKnown RBP8.39□□□□□ -1.07
LIG1-209ENST00000596104 EBF4Q9BQW3 602 aa8.39□□□□□ -1.07
LIG1-209ENST00000596104 MRI1Q9BV20 369 aa8.39□□□□□ -1.07
LIG1-209ENST00000596104 OR2H1Q9GZK4 316 aa8.39□□□□□ -1.07
LIG1-209ENST00000596104 KCNN2Q9H2S1 579 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms