RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 ABHD4Q8TB40 342 aa12.67□□□□□ -0.38
SF3A2-204ENST00000589118 GTF2H4Q92759 462 aa12.67□□□□□ -0.38
SF3A2-204ENST00000589118 POM121L2Q96KW2 1035 aa12.67□□□□□ -0.38
SF3A2-204ENST00000589118 ARHGDIGQ99819 225 aa12.67□□□□□ -0.38
SF3A2-204ENST00000589118 EGLN1Q9GZT9 426 aa12.67□□□□□ -0.38
SF3A2-204ENST00000589118 LRMDAQ9H2I8 198 aa12.67□□□□□ -0.38
SF3A2-204ENST00000589118 TMEM106BQ9NUM4 274 aa12.67□□□□□ -0.38
SF3A2-204ENST00000589118 SLC25A37Q9NYZ2 338 aa12.67□□□□□ -0.38
SF3A2-204ENST00000589118 TRAV40A0A0B4J280 105 aa12.66□□□□□ -0.38
SF3A2-204ENST00000589118 LYPD3O95274 346 aa12.66□□□□□ -0.38
SF3A2-204ENST00000589118 F13BP05160 661 aa12.66□□□□□ -0.38
SF3A2-204ENST00000589118 BMP2P12643 396 aa12.66□□□□□ -0.38
SF3A2-204ENST00000589118 ETS2P15036 469 aa12.66□□□□□ -0.38
SF3A2-204ENST00000589118 HOXB9P17482 250 aaPredicted RBP12.66□□□□□ -0.38
SF3A2-204ENST00000589118 POLR2JP52435 117 aaKnown RBP12.66□□□□□ -0.38
SF3A2-204ENST00000589118 CLRN1P58418 232 aa12.66□□□□□ -0.38
SF3A2-204ENST00000589118 NCALDP61601 193 aa12.66□□□□□ -0.38
SF3A2-204ENST00000589118 ERVK-25P63136 954 aa12.66□□□□□ -0.38
SF3A2-204ENST00000589118 SLC3A1Q07837 685 aa12.66□□□□□ -0.38
SF3A2-204ENST00000589118 NPTX1Q15818 432 aa12.66□□□□□ -0.38
SF3A2-204ENST00000589118 ZNF74Q16587 644 aa12.66□□□□□ -0.38
SF3A2-204ENST00000589118 RUNDC3AQ59EK9 446 aa12.66□□□□□ -0.38
SF3A2-204ENST00000589118 ASPHD2Q6ICH7 369 aa12.66□□□□□ -0.38
SF3A2-204ENST00000589118 LINC00114Q6XXX2 140 aa12.66□□□□□ -0.38
SF3A2-204ENST00000589118 LRRC28Q86X40 367 aaPredicted RBP12.66□□□□□ -0.38
SF3A2-204ENST00000589118 RBM45Q8IUH3 476 aaKnown RBP12.66□□□□□ -0.38
SF3A2-204ENST00000589118 KLHL36Q8N4N3 616 aa12.66□□□□□ -0.38
SF3A2-204ENST00000589118 SMYD1Q8NB12 490 aa12.66□□□□□ -0.38
SF3A2-204ENST00000589118 DIRC2Q96SL1 478 aa12.66□□□□□ -0.38
SF3A2-204ENST00000589118 MCHR1Q99705 422 aa12.66□□□□□ -0.38
SF3A2-204ENST00000589118 CITED1Q99966 193 aa12.66□□□□□ -0.38
SF3A2-204ENST00000589118 RBM4BQ9BQ04 359 aaKnown RBP12.66□□□□□ -0.38
SF3A2-204ENST00000589118 EBF4Q9BQW3 602 aa12.66□□□□□ -0.38
SF3A2-204ENST00000589118 SIKE1Q9BRV8 207 aa12.66□□□□□ -0.38
SF3A2-204ENST00000589118 TMEM43Q9BTV4 400 aa12.66□□□□□ -0.38
SF3A2-204ENST00000589118 C1orf198Q9H425 327 aa12.66□□□□□ -0.38
SF3A2-204ENST00000589118 C1RLQ9NZP8 487 aa12.66□□□□□ -0.38
SF3A2-204ENST00000589118 TESQ9UGI8 421 aaKnown RBP12.66□□□□□ -0.38
SF3A2-204ENST00000589118 POLR3KQ9Y2Y1 108 aaPredicted RBP12.66□□□□□ -0.38
SF3A2-204ENST00000589118 MMP24Q9Y5R2 645 aa12.66□□□□□ -0.38
SF3A2-204ENST00000589118 DOCK11Q5JSL3 2073 aa12.65□□□□□ -0.38
SF3A2-204ENST00000589118 CPSF4LA6NMK7 179 aaKnown RBP12.65□□□□□ -0.38
SF3A2-204ENST00000589118 EDF1O60869 148 aaKnown RBP12.65□□□□□ -0.38
SF3A2-204ENST00000589118 TSPAN15O95858 294 aa12.65□□□□□ -0.38
SF3A2-204ENST00000589118 PLATP00750 562 aa12.65□□□□□ -0.38
SF3A2-204ENST00000589118 PTHP01270 115 aa12.65□□□□□ -0.38
SF3A2-204ENST00000589118 PRB2P02812 416 aaPredicted RBP12.65□□□□□ -0.38
SF3A2-204ENST00000589118 MTNR1AP48039 350 aa12.65□□□□□ -0.38
SF3A2-204ENST00000589118 RAG2P55895 527 aa12.65□□□□□ -0.38
SF3A2-204ENST00000589118 PPP1CBP62140 327 aa12.65□□□□□ -0.38
SF3A2-204ENST00000589118 CDK6Q00534 326 aa12.65□□□□□ -0.38
SF3A2-204ENST00000589118 PSG4Q00888 419 aa12.65□□□□□ -0.38
SF3A2-204ENST00000589118 PAX2Q02962 417 aa12.65□□□□□ -0.38
SF3A2-204ENST00000589118 FMODQ06828 376 aa12.65□□□□□ -0.38
SF3A2-204ENST00000589118 SGCAQ16586 387 aa12.65□□□□□ -0.38
SF3A2-204ENST00000589118 OCLNQ16625 522 aa12.65□□□□□ -0.38
SF3A2-204ENST00000589118 HIST3H3Q16695 136 aa12.65□□□□□ -0.38
SF3A2-204ENST00000589118 RUSC1-AS1Q66K80 236 aa12.65□□□□□ -0.38
SF3A2-204ENST00000589118 Q6ZR03 302 aa12.65□□□□□ -0.38
SF3A2-204ENST00000589118 POU5F2Q8N7G0 328 aa12.65□□□□□ -0.38
SF3A2-204ENST00000589118 HIPK4Q8NE63 616 aa12.65□□□□□ -0.38
SF3A2-204ENST00000589118 OR4D11Q8NGI4 311 aa12.65□□□□□ -0.38
SF3A2-204ENST00000589118 OR10S1Q8NGN2 331 aa12.65□□□□□ -0.38
SF3A2-204ENST00000589118 SIGLEC11Q96RL6 698 aa12.65□□□□□ -0.38
SF3A2-204ENST00000589118 CHIAQ9BZP6 476 aa12.65□□□□□ -0.38
SF3A2-204ENST00000589118 IKZF5Q9H5V7 419 aa12.65□□□□□ -0.38
SF3A2-204ENST00000589118 RMND5AQ9H871 391 aa12.65□□□□□ -0.38
SF3A2-204ENST00000589118 MED4Q9NPJ6 270 aa12.65□□□□□ -0.38
SF3A2-204ENST00000589118 THUMPD1Q9NXG2 353 aaKnown RBP12.65□□□□□ -0.38
SF3A2-204ENST00000589118 UGT2A1Q9Y4X1 527 aa12.65□□□□□ -0.38
SF3A2-204ENST00000589118 NBEAL2Q6ZNJ1 2754 aa12.65□□□□□ -0.38
SF3A2-204ENST00000589118 IGHV3-64DA0A0J9YX35 117 aa12.64□□□□□ -0.39
SF3A2-204ENST00000589118 F5H0A9 414 aaPredicted RBP12.64□□□□□ -0.39
SF3A2-204ENST00000589118 BLOC1S5-TXNDC5H3BN57 136 aa12.64□□□□□ -0.39
SF3A2-204ENST00000589118 TRMUO75648 421 aaKnown RBP12.64□□□□□ -0.39
SF3A2-204ENST00000589118 MT-ATP6P00846 226 aa12.64□□□□□ -0.39
SF3A2-204ENST00000589118 OPN1SWP03999 348 aa12.64□□□□□ -0.39
SF3A2-204ENST00000589118 ERFP50548 548 aa12.64□□□□□ -0.39
SF3A2-204ENST00000589118 ZNF84P51523 738 aa12.64□□□□□ -0.39
SF3A2-204ENST00000589118 STX1BP61266 288 aa12.64□□□□□ -0.39
SF3A2-204ENST00000589118 PSG7Q13046 419 aa12.64□□□□□ -0.39
SF3A2-204ENST00000589118 GCNT6Q5T4J0 391 aa12.64□□□□□ -0.39
SF3A2-204ENST00000589118 MBNL2Q5VZF2 373 aaKnown RBP12.64□□□□□ -0.39
SF3A2-204ENST00000589118 OLFML2AQ68BL7 652 aa12.64□□□□□ -0.39
SF3A2-204ENST00000589118 REEP3Q6NUK4 255 aa12.64□□□□□ -0.39
SF3A2-204ENST00000589118 RANBP3LQ86VV4 465 aaPredicted RBP12.64□□□□□ -0.39
SF3A2-204ENST00000589118 OR2Z1Q8NG97 314 aa12.64□□□□□ -0.39
SF3A2-204ENST00000589118 ITLN1Q8WWA0 313 aa12.64□□□□□ -0.39
SF3A2-204ENST00000589118 NSMAFQ92636 917 aa12.64□□□□□ -0.39
SF3A2-204ENST00000589118 ZDHHC16Q969W1 377 aa12.64□□□□□ -0.39
SF3A2-204ENST00000589118 NABP1Q96AH0 204 aa12.64□□□□□ -0.39
SF3A2-204ENST00000589118 MRPL13Q9BYD1 178 aaKnown RBP12.64□□□□□ -0.39
SF3A2-204ENST00000589118 MMP27Q9H306 513 aa12.64□□□□□ -0.39
SF3A2-204ENST00000589118 BEX1Q9HBH7 125 aa12.64□□□□□ -0.39
SF3A2-204ENST00000589118 CCNB1IP1Q9NPC3 277 aa12.64□□□□□ -0.39
SF3A2-204ENST00000589118 EIF3KQ9UBQ5 218 aaKnown RBP12.64□□□□□ -0.39
SF3A2-204ENST00000589118 GMEB1Q9Y692 573 aa12.64□□□□□ -0.39
SF3A2-204ENST00000589118 CEACAM18A8MTB9 384 aa12.63□□□□□ -0.39
SF3A2-204ENST00000589118 A8MXK9 166 aa12.63□□□□□ -0.39
SF3A2-204ENST00000589118 TIMM8AO60220 97 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms