RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 ZNF83P51522 516 aa13.6□□□□□ -0.23
NCLN-203ENST00000587740 EFNA4P52798 201 aa13.6□□□□□ -0.23
NCLN-203ENST00000587740 UBE2NP61088 152 aaKnown RBP13.6□□□□□ -0.23
NCLN-203ENST00000587740 MYBPC1Q00872 1141 aa13.6□□□□□ -0.23
NCLN-203ENST00000587740 COX10Q12887 443 aa13.6□□□□□ -0.23
NCLN-203ENST00000587740 HIST3H3Q16695 136 aa13.6□□□□□ -0.23
NCLN-203ENST00000587740 GPR139Q6DWJ6 353 aa13.6□□□□□ -0.23
NCLN-203ENST00000587740 FAM166AQ6J272 317 aa13.6□□□□□ -0.23
NCLN-203ENST00000587740 ZFP1Q6P2D0 407 aa13.6□□□□□ -0.23
NCLN-203ENST00000587740 ANKRD16Q6P6B7 361 aa13.6□□□□□ -0.23
NCLN-203ENST00000587740 SHQ1Q6PI26 577 aaKnown RBP13.6□□□□□ -0.23
NCLN-203ENST00000587740 LRFN4Q6PJG9 635 aa13.6□□□□□ -0.23
NCLN-203ENST00000587740 TMEM108Q6UXF1 575 aa13.6□□□□□ -0.23
NCLN-203ENST00000587740 RASSF6Q6ZTQ3 369 aa13.6□□□□□ -0.23
NCLN-203ENST00000587740 OR52L1Q8NGH7 329 aa13.6□□□□□ -0.23
NCLN-203ENST00000587740 OR5K1Q8NHB7 308 aa13.6□□□□□ -0.23
NCLN-203ENST00000587740 ZNF519Q8TB69 540 aa13.6□□□□□ -0.23
NCLN-203ENST00000587740 FNDC8Q8TC99 324 aa13.6□□□□□ -0.23
NCLN-203ENST00000587740 LRTOMTQ8WZ04 291 aa13.6□□□□□ -0.23
NCLN-203ENST00000587740 ZNF837Q96EG3 531 aaPredicted RBP13.6□□□□□ -0.23
NCLN-203ENST00000587740 C1orf159Q96HA4 380 aa13.6□□□□□ -0.23
NCLN-203ENST00000587740 BOD1Q96IK1 185 aa13.6□□□□□ -0.23
NCLN-203ENST00000587740 Q96M85 177 aa13.6□□□□□ -0.23
NCLN-203ENST00000587740 RBP7Q96R05 134 aa13.6□□□□□ -0.23
NCLN-203ENST00000587740 ALG12Q9BV10 488 aa13.6□□□□□ -0.23
NCLN-203ENST00000587740 IFT27Q9BW83 186 aa13.6□□□□□ -0.23
NCLN-203ENST00000587740 ZNF556Q9HAH1 456 aa13.6□□□□□ -0.23
NCLN-203ENST00000587740 NTN4Q9HB63 628 aa13.6□□□□□ -0.23
NCLN-203ENST00000587740 POU2F3Q9UKI9 436 aa13.6□□□□□ -0.23
NCLN-203ENST00000587740 AMDHD2Q9Y303 409 aa13.6□□□□□ -0.23
NCLN-203ENST00000587740 CDH10Q9Y6N8 788 aa13.6□□□□□ -0.23
NCLN-203ENST00000587740 A0A096LPE4 126 aa13.59□□□□□ -0.23
NCLN-203ENST00000587740 A0A1W2PPZ6 126 aa13.59□□□□□ -0.23
NCLN-203ENST00000587740 DHHO43323 396 aa13.59□□□□□ -0.23
NCLN-203ENST00000587740 PPP1R3DO95685 299 aa13.59□□□□□ -0.23
NCLN-203ENST00000587740 WNT11O96014 354 aa13.59□□□□□ -0.23
NCLN-203ENST00000587740 APEHP13798 732 aaKnown RBP13.59□□□□□ -0.23
NCLN-203ENST00000587740 ANXA8P13928 327 aa13.59□□□□□ -0.23
NCLN-203ENST00000587740 HOXB1P14653 301 aaPredicted RBP13.59□□□□□ -0.23
NCLN-203ENST00000587740 PTAFRP25105 342 aa13.59□□□□□ -0.23
NCLN-203ENST00000587740 ZNF84P51523 738 aa13.59□□□□□ -0.23
NCLN-203ENST00000587740 KRR1Q13601 381 aaKnown RBP13.59□□□□□ -0.23
NCLN-203ENST00000587740 TBRG1Q3YBR2 411 aa13.59□□□□□ -0.23
NCLN-203ENST00000587740 HIKESHIQ53FT3 197 aa13.59□□□□□ -0.23
NCLN-203ENST00000587740 THEM4Q5T1C6 240 aa13.59□□□□□ -0.23
NCLN-203ENST00000587740 C1QTNF12Q5T7M4 302 aa13.59□□□□□ -0.23
NCLN-203ENST00000587740 ZNF813Q6ZN06 617 aa13.59□□□□□ -0.23
NCLN-203ENST00000587740 FAM122BQ7Z309 247 aa13.59□□□□□ -0.23
NCLN-203ENST00000587740 AMIGO2Q86SJ2 522 aa13.59□□□□□ -0.23
NCLN-203ENST00000587740 HS3ST5Q8IZT8 346 aa13.59□□□□□ -0.23
NCLN-203ENST00000587740 WDR31Q8NA23 367 aa13.59□□□□□ -0.23
NCLN-203ENST00000587740 MAGEE2Q8TD90 523 aaPredicted RBP13.59□□□□□ -0.23
NCLN-203ENST00000587740 BCL2L2Q92843 193 aaPredicted RBP13.59□□□□□ -0.23
NCLN-203ENST00000587740 MCHR2Q969V1 340 aa13.59□□□□□ -0.23
NCLN-203ENST00000587740 RASD2Q96D21 266 aa13.59□□□□□ -0.23
NCLN-203ENST00000587740 ERMAPQ96PL5 475 aaPredicted RBP13.59□□□□□ -0.23
NCLN-203ENST00000587740 FOXB1Q99853 325 aa13.59□□□□□ -0.23
NCLN-203ENST00000587740 NIPSNAP1Q9BPW8 284 aa13.59□□□□□ -0.23
NCLN-203ENST00000587740 EGLN3Q9H6Z9 239 aa13.59□□□□□ -0.23
NCLN-203ENST00000587740 IL20Q9NYY1 176 aa13.59□□□□□ -0.23
NCLN-203ENST00000587740 IGHV4-61A0A0C4DH41 118 aa13.58□□□□□ -0.24
NCLN-203ENST00000587740 TEX13CA0A0J9YWL9 993 aa13.58□□□□□ -0.24
NCLN-203ENST00000587740 G3V2T6 193 aa13.58□□□□□ -0.24
NCLN-203ENST00000587740 SOCS2O14508 198 aa13.58□□□□□ -0.24
NCLN-203ENST00000587740 IMPA2O14732 288 aa13.58□□□□□ -0.24
NCLN-203ENST00000587740 AHCYL1O43865 530 aa13.58□□□□□ -0.24
NCLN-203ENST00000587740 TXNDC12O95881 172 aa13.58□□□□□ -0.24
NCLN-203ENST00000587740 CSF3P09919 207 aa13.58□□□□□ -0.24
NCLN-203ENST00000587740 PRKACGP22612 351 aa13.58□□□□□ -0.24
NCLN-203ENST00000587740 NOS3P29474 1203 aa13.58□□□□□ -0.24
NCLN-203ENST00000587740 GGTLC2Q14390 218 aa13.58□□□□□ -0.24
NCLN-203ENST00000587740 MESTQ5EB52 335 aa13.58□□□□□ -0.24
NCLN-203ENST00000587740 ZNF544Q6NX49 715 aa13.58□□□□□ -0.24
NCLN-203ENST00000587740 CD300LDQ6UXZ3 194 aa13.58□□□□□ -0.24
NCLN-203ENST00000587740 CLDN22Q8N7P3 220 aa13.58□□□□□ -0.24
NCLN-203ENST00000587740 ATG16L2Q8NAA4 619 aa13.58□□□□□ -0.24
NCLN-203ENST00000587740 CENPNQ96H22 339 aaPredicted RBP13.58□□□□□ -0.24
NCLN-203ENST00000587740 C1QTNF6Q9BXI9 259 aa13.58□□□□□ -0.24
NCLN-203ENST00000587740 PLA2G12AQ9BZM1 189 aa13.58□□□□□ -0.24
NCLN-203ENST00000587740 SMURF2Q9HAU4 748 aa13.58□□□□□ -0.24
NCLN-203ENST00000587740 OBP2BQ9NPH6 170 aa13.58□□□□□ -0.24
NCLN-203ENST00000587740 TBC1D23Q9NUY8 699 aa13.58□□□□□ -0.24
NCLN-203ENST00000587740 KIF17Q9P2E2 1029 aa13.58□□□□□ -0.24
NCLN-203ENST00000587740 MEGF8Q7Z7M0 2845 aa13.58□□□□□ -0.24
NCLN-203ENST00000587740 MGAM2Q2M2H8 2515 aa13.57□□□□□ -0.24
NCLN-203ENST00000587740 PRSS37A4D1T9 235 aa13.57□□□□□ -0.24
NCLN-203ENST00000587740 ARPC3O15145 178 aa13.57□□□□□ -0.24
NCLN-203ENST00000587740 IDH3BO43837 385 aa13.57□□□□□ -0.24
NCLN-203ENST00000587740 ENTPD5O75356 428 aa13.57□□□□□ -0.24
NCLN-203ENST00000587740 SEC14L2O76054 403 aa13.57□□□□□ -0.24
NCLN-203ENST00000587740 SOX14O95416 240 aa13.57□□□□□ -0.24
NCLN-203ENST00000587740 SLC2A10O95528 541 aa13.57□□□□□ -0.24
NCLN-203ENST00000587740 ZNF23P17027 643 aa13.57□□□□□ -0.24
NCLN-203ENST00000587740 PAX7P23759 505 aa13.57□□□□□ -0.24
NCLN-203ENST00000587740 NR4A2P43354 598 aa13.57□□□□□ -0.24
NCLN-203ENST00000587740 ZNF133P52736 654 aaPredicted RBP13.57□□□□□ -0.24
NCLN-203ENST00000587740 MST1LQ2TV78 715 aa13.57□□□□□ -0.24
NCLN-203ENST00000587740 CLEC12AQ5QGZ9 265 aa13.57□□□□□ -0.24
NCLN-203ENST00000587740 C10orf128Q5T292 105 aa13.57□□□□□ -0.24
NCLN-203ENST00000587740 LIPNQ5VXI9 398 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms