RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 RUNDC3AQ59EK9 446 aa10.01□□□□□ -0.81
BRCA1-225ENST00000586385 TTC33Q6PID6 262 aaPredicted RBP10.01□□□□□ -0.81
BRCA1-225ENST00000586385 Q6ZR03 302 aa10.01□□□□□ -0.81
BRCA1-225ENST00000586385 MOSPD2Q8NHP6 518 aa10.01□□□□□ -0.81
BRCA1-225ENST00000586385 PFN4Q8NHR9 129 aa10.01□□□□□ -0.81
BRCA1-225ENST00000586385 HDAC2Q92769 488 aaKnown RBP10.01□□□□□ -0.81
BRCA1-225ENST00000586385 TAMM41Q96BW9 452 aa10.01□□□□□ -0.81
BRCA1-225ENST00000586385 TRIM44Q96DX7 344 aaPredicted RBP10.01□□□□□ -0.81
BRCA1-225ENST00000586385 SIGLEC11Q96RL6 698 aa10.01□□□□□ -0.81
BRCA1-225ENST00000586385 PCDHAC1Q9H158 963 aa10.01□□□□□ -0.81
BRCA1-225ENST00000586385 WNT5BQ9H1J7 359 aa10.01□□□□□ -0.81
BRCA1-225ENST00000586385 LRMDAQ9H2I8 198 aa10.01□□□□□ -0.81
BRCA1-225ENST00000586385 POFUT1Q9H488 388 aa10.01□□□□□ -0.81
BRCA1-225ENST00000586385 EVA1AQ9H8M9 152 aa10.01□□□□□ -0.81
BRCA1-225ENST00000586385 SIAEQ9HAT2 523 aa10.01□□□□□ -0.81
BRCA1-225ENST00000586385 C20orf141Q9NUB4 165 aa10.01□□□□□ -0.81
BRCA1-225ENST00000586385 CCDC167Q9P0B6 97 aa10.01□□□□□ -0.81
BRCA1-225ENST00000586385 EGFL7Q9UHF1 273 aa10.01□□□□□ -0.81
BRCA1-225ENST00000586385 SLC13A4Q9UKG4 626 aa10.01□□□□□ -0.81
BRCA1-225ENST00000586385 ANGPT4Q9Y264 503 aa10.01□□□□□ -0.81
BRCA1-225ENST00000586385 INSIG2Q9Y5U4 225 aa10.01□□□□□ -0.81
BRCA1-225ENST00000586385 NPTNQ9Y639 398 aa10.01□□□□□ -0.81
BRCA1-225ENST00000586385 AUP1Q9Y679 476 aa10.01□□□□□ -0.81
BRCA1-225ENST00000586385 VWFP04275 2813 aa10.01□□□□□ -0.81
BRCA1-225ENST00000586385 PRKDCP78527 4128 aaKnown RBP10.01□□□□□ -0.81
BRCA1-225ENST00000586385 TRAPPC13A5PLN9 417 aa10□□□□□ -0.81
BRCA1-225ENST00000586385 A8MXK9 166 aa10□□□□□ -0.81
BRCA1-225ENST00000586385 BLOC1S5-TXNDC5H3BN57 136 aa10□□□□□ -0.81
BRCA1-225ENST00000586385 CLDN34H7C241 214 aa10□□□□□ -0.81
BRCA1-225ENST00000586385 MT-ND5P03915 603 aa10□□□□□ -0.81
BRCA1-225ENST00000586385 SBK2P0C263 348 aa10□□□□□ -0.81
BRCA1-225ENST00000586385 IGHV4-38-2P0DP08 117 aa10□□□□□ -0.81
BRCA1-225ENST00000586385 ACADSP16219 412 aa10□□□□□ -0.81
BRCA1-225ENST00000586385 MDKP21741 143 aaPredicted RBP10□□□□□ -0.81
BRCA1-225ENST00000586385 AQP2P41181 271 aa10□□□□□ -0.81
BRCA1-225ENST00000586385 IDH3AP50213 366 aa10□□□□□ -0.81
BRCA1-225ENST00000586385 ATP4BP51164 291 aa10□□□□□ -0.81
BRCA1-225ENST00000586385 ZNF84P51523 738 aa10□□□□□ -0.81
BRCA1-225ENST00000586385 SLC18A1P54219 525 aa10□□□□□ -0.81
BRCA1-225ENST00000586385 PPP1CBP62140 327 aa10□□□□□ -0.81
BRCA1-225ENST00000586385 SRSF4Q08170 494 aaKnown RBP10□□□□□ -0.81
BRCA1-225ENST00000586385 BAMBIQ13145 260 aa10□□□□□ -0.81
BRCA1-225ENST00000586385 CDK5R2Q13319 367 aa10□□□□□ -0.81
BRCA1-225ENST00000586385 ZMYND11Q15326 602 aa10□□□□□ -0.81
BRCA1-225ENST00000586385 MIDNQ504T8 468 aa10□□□□□ -0.81
BRCA1-225ENST00000586385 ARMCX4Q5H9R4 360 aa10□□□□□ -0.81
BRCA1-225ENST00000586385 LEG1Q6P5S2 330 aa10□□□□□ -0.81
BRCA1-225ENST00000586385 SLC25A47Q6Q0C1 308 aa10□□□□□ -0.81
BRCA1-225ENST00000586385 NANOGNBQ7Z5D8 188 aa10□□□□□ -0.81
BRCA1-225ENST00000586385 JAZF1Q86VZ6 243 aa10□□□□□ -0.81
BRCA1-225ENST00000586385 ZNF283Q8N7M2 679 aa10□□□□□ -0.81
BRCA1-225ENST00000586385 CLDN22Q8N7P3 220 aa10□□□□□ -0.81
BRCA1-225ENST00000586385 VANGL1Q8TAA9 524 aaPredicted RBP10□□□□□ -0.81
BRCA1-225ENST00000586385 DCLRE1CQ96SD1 692 aaKnown RBP10□□□□□ -0.81
BRCA1-225ENST00000586385 SLC19A3Q9BZV2 496 aa10□□□□□ -0.81
BRCA1-225ENST00000586385 PATZ1Q9HBE1 687 aaKnown RBP10□□□□□ -0.81
BRCA1-225ENST00000586385 TMEM106BQ9NUM4 274 aa10□□□□□ -0.81
BRCA1-225ENST00000586385 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10□□□□□ -0.81
BRCA1-225ENST00000586385 CMYA5Q8N3K9 4069 aa9.99□□□□□ -0.81
BRCA1-225ENST00000586385 CENPBD1B2RD01 187 aa9.99□□□□□ -0.81
BRCA1-225ENST00000586385 OR7A10O76100 309 aa9.99□□□□□ -0.81
BRCA1-225ENST00000586385 SCG5P05408 212 aa9.99□□□□□ -0.81
BRCA1-225ENST00000586385 UMPSP11172 480 aa9.99□□□□□ -0.81
BRCA1-225ENST00000586385 GCH1P30793 250 aa9.99□□□□□ -0.81
BRCA1-225ENST00000586385 CD80P33681 288 aa9.99□□□□□ -0.81
BRCA1-225ENST00000586385 STX1BP61266 288 aa9.99□□□□□ -0.81
BRCA1-225ENST00000586385 ERVK-25P63136 954 aa9.99□□□□□ -0.81
BRCA1-225ENST00000586385 IL13RA1P78552 427 aa9.99□□□□□ -0.81
BRCA1-225ENST00000586385 PAX8Q06710 450 aa9.99□□□□□ -0.81
BRCA1-225ENST00000586385 SLC3A1Q07837 685 aa9.99□□□□□ -0.81
BRCA1-225ENST00000586385 PSG7Q13046 419 aa9.99□□□□□ -0.81
BRCA1-225ENST00000586385 TMEM155Q4W5P6 130 aa9.99□□□□□ -0.81
BRCA1-225ENST00000586385 FAM27BQ5VT28 67 aa9.99□□□□□ -0.81
BRCA1-225ENST00000586385 RBMS3Q6XE24 437 aaKnown RBP9.99□□□□□ -0.81
BRCA1-225ENST00000586385 LRRC28Q86X40 367 aaPredicted RBP9.99□□□□□ -0.81
BRCA1-225ENST00000586385 NKAIN4Q8IVV8 208 aa9.99□□□□□ -0.81
BRCA1-225ENST00000586385 C11orf65Q8NCR3 313 aa9.99□□□□□ -0.81
BRCA1-225ENST00000586385 ABHD4Q8TB40 342 aa9.99□□□□□ -0.81
BRCA1-225ENST00000586385 ST7LQ8TDW4 575 aa9.99□□□□□ -0.81
BRCA1-225ENST00000586385 NSMAFQ92636 917 aa9.99□□□□□ -0.81
BRCA1-225ENST00000586385 DACT3Q96B18 629 aaPredicted RBP9.99□□□□□ -0.81
BRCA1-225ENST00000586385 TLCD1Q96CP7 247 aa9.99□□□□□ -0.81
BRCA1-225ENST00000586385 MPP4Q96JB8 637 aa9.99□□□□□ -0.81
BRCA1-225ENST00000586385 OR2H1Q9GZK4 316 aa9.99□□□□□ -0.81
BRCA1-225ENST00000586385 EGLN1Q9GZT9 426 aa9.99□□□□□ -0.81
BRCA1-225ENST00000586385 SLITRK2Q9H156 845 aa9.99□□□□□ -0.81
BRCA1-225ENST00000586385 ZMAT3Q9HA38 289 aaKnown RBP9.99□□□□□ -0.81
BRCA1-225ENST00000586385 CCNB1IP1Q9NPC3 277 aa9.99□□□□□ -0.81
BRCA1-225ENST00000586385 RAB21Q9UL25 225 aa9.99□□□□□ -0.81
BRCA1-225ENST00000586385 TANC2Q9HCD6 1990 aa9.99□□□□□ -0.81
BRCA1-225ENST00000586385 NOTCH1P46531 2555 aa9.98□□□□□ -0.81
BRCA1-225ENST00000586385 IGHV3OR16-10A0A075B7F0 116 aa9.98□□□□□ -0.81
BRCA1-225ENST00000586385 MDFIC2A0A1B0GVS7 189 aa9.98□□□□□ -0.81
BRCA1-225ENST00000586385 A0A1W2PRG6 482 aa9.98□□□□□ -0.81
BRCA1-225ENST00000586385 PLSCR5A0PG75 271 aa9.98□□□□□ -0.81
BRCA1-225ENST00000586385 POM121CA8CG34 1229 aa9.98□□□□□ -0.81
BRCA1-225ENST00000586385 MT-ND1P03886 318 aa9.98□□□□□ -0.81
BRCA1-225ENST00000586385 HIST1H2ABP04908 130 aa9.98□□□□□ -0.81
BRCA1-225ENST00000586385 FUT1P19526 365 aa9.98□□□□□ -0.81
BRCA1-225ENST00000586385 FUT4P22083 530 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms