RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 DVL3Q92997 716 aaPredicted RBP12.79□□□□□ -0.36
CDK5RAP3-237ENST00000585163 SLC25A28Q96A46 364 aa12.79□□□□□ -0.36
CDK5RAP3-237ENST00000585163 LINC00052Q96N35 136 aa12.79□□□□□ -0.36
CDK5RAP3-237ENST00000585163 FOXN4Q96NZ1 517 aa12.79□□□□□ -0.36
CDK5RAP3-237ENST00000585163 PTDSS2Q9BVG9 487 aa12.79□□□□□ -0.36
CDK5RAP3-237ENST00000585163 CHST6Q9GZX3 395 aa12.79□□□□□ -0.36
CDK5RAP3-237ENST00000585163 FXYD6Q9H0Q3 95 aa12.79□□□□□ -0.36
CDK5RAP3-237ENST00000585163 ATG5Q9H1Y0 275 aa12.79□□□□□ -0.36
CDK5RAP3-237ENST00000585163 PPA2Q9H2U2 334 aa12.79□□□□□ -0.36
CDK5RAP3-237ENST00000585163 C1orf198Q9H425 327 aa12.79□□□□□ -0.36
CDK5RAP3-237ENST00000585163 EXO5Q9H790 373 aa12.79□□□□□ -0.36
CDK5RAP3-237ENST00000585163 TMEM138Q9NPI0 162 aa12.79□□□□□ -0.36
CDK5RAP3-237ENST00000585163 SOHLH2Q9NX45 425 aa12.79□□□□□ -0.36
CDK5RAP3-237ENST00000585163 CYP8B1Q9UNU6 501 aa12.79□□□□□ -0.36
CDK5RAP3-237ENST00000585163 IGHV5-51A0A0C4DH38 117 aa12.79□□□□□ -0.36
CDK5RAP3-237ENST00000585163 C17orf51A8MQB3 221 aa12.79□□□□□ -0.36
CDK5RAP3-237ENST00000585163 RAD1O60671 282 aa12.79□□□□□ -0.36
CDK5RAP3-237ENST00000585163 DDAH2O95865 285 aa12.79□□□□□ -0.36
CDK5RAP3-237ENST00000585163 PLGP00747 810 aaPredicted RBP12.79□□□□□ -0.36
CDK5RAP3-237ENST00000585163 IGLV3-19P01714 112 aa12.79□□□□□ -0.36
CDK5RAP3-237ENST00000585163 ITGB2P05107 769 aa12.79□□□□□ -0.36
CDK5RAP3-237ENST00000585163 HOXD4P09016 255 aaPredicted RBP12.79□□□□□ -0.36
CDK5RAP3-237ENST00000585163 MAOBP27338 520 aa12.79□□□□□ -0.36
CDK5RAP3-237ENST00000585163 GMFBP60983 142 aa12.79□□□□□ -0.36
CDK5RAP3-237ENST00000585163 INSM1Q01101 510 aaPredicted RBP12.79□□□□□ -0.36
CDK5RAP3-237ENST00000585163 GSG1LQ6UXU4 331 aa12.79□□□□□ -0.36
CDK5RAP3-237ENST00000585163 OR8S1Q8NH09 359 aa12.79□□□□□ -0.36
CDK5RAP3-237ENST00000585163 COQ8AQ8NI60 647 aa12.79□□□□□ -0.36
CDK5RAP3-237ENST00000585163 ZNF721Q8TF20 911 aa12.79□□□□□ -0.36
CDK5RAP3-237ENST00000585163 ASB5Q8WWX0 329 aa12.79□□□□□ -0.36
CDK5RAP3-237ENST00000585163 PPP1R14AQ96A00 147 aa12.79□□□□□ -0.36
CDK5RAP3-237ENST00000585163 C8orf44Q96CB5 159 aa12.79□□□□□ -0.36
CDK5RAP3-237ENST00000585163 KLHDC7BQ96G42 594 aa12.79□□□□□ -0.36
CDK5RAP3-237ENST00000585163 GAL3ST4Q96RP7 486 aa12.79□□□□□ -0.36
CDK5RAP3-237ENST00000585163 C8orf33Q9H7E9 229 aaPredicted RBP12.79□□□□□ -0.36
CDK5RAP3-237ENST00000585163 VSX1Q9NZR4 365 aaPredicted RBP12.79□□□□□ -0.36
CDK5RAP3-237ENST00000585163 CD207Q9UJ71 328 aa12.79□□□□□ -0.36
CDK5RAP3-237ENST00000585163 DHDHQ9UQ10 334 aa12.79□□□□□ -0.36
CDK5RAP3-237ENST00000585163 MMACHCQ9Y4U1 282 aa12.79□□□□□ -0.36
CDK5RAP3-237ENST00000585163 THADAQ6YHU6 1953 aa12.79□□□□□ -0.36
CDK5RAP3-237ENST00000585163 IGLV1-36A0A0B4J1U3 117 aa12.78□□□□□ -0.36
CDK5RAP3-237ENST00000585163 TMEM150CB9EJG8 249 aa12.78□□□□□ -0.36
CDK5RAP3-237ENST00000585163 SULT1C2O00338 296 aa12.78□□□□□ -0.36
CDK5RAP3-237ENST00000585163 SLC16A7O60669 478 aa12.78□□□□□ -0.36
CDK5RAP3-237ENST00000585163 WISP1O95388 367 aa12.78□□□□□ -0.36
CDK5RAP3-237ENST00000585163 SPARCP09486 303 aa12.78□□□□□ -0.36
CDK5RAP3-237ENST00000585163 CTRB1P17538 263 aa12.78□□□□□ -0.36
CDK5RAP3-237ENST00000585163 CENPAP49450 140 aa12.78□□□□□ -0.36
CDK5RAP3-237ENST00000585163 GFERP55789 205 aa12.78□□□□□ -0.36
CDK5RAP3-237ENST00000585163 PXDC1Q5TGL8 231 aa12.78□□□□□ -0.36
CDK5RAP3-237ENST00000585163 CTRB2Q6GPI1 263 aa12.78□□□□□ -0.36
CDK5RAP3-237ENST00000585163 MARCH3Q86UD3 253 aa12.78□□□□□ -0.36
CDK5RAP3-237ENST00000585163 SLC51BQ86UW2 128 aa12.78□□□□□ -0.36
CDK5RAP3-237ENST00000585163 GABRG1Q8N1C3 465 aa12.78□□□□□ -0.36
CDK5RAP3-237ENST00000585163 TSLPQ969D9 159 aa12.78□□□□□ -0.36
CDK5RAP3-237ENST00000585163 SLC25A36Q96CQ1 311 aa12.78□□□□□ -0.36
CDK5RAP3-237ENST00000585163 PDE7BQ9NP56 450 aa12.78□□□□□ -0.36
CDK5RAP3-237ENST00000585163 GTF2A1LQ9UNN4 478 aa12.78□□□□□ -0.36
CDK5RAP3-237ENST00000585163 IGKV3D-11A0A0A0MRZ8 115 aa12.78□□□□□ -0.36
CDK5RAP3-237ENST00000585163 BET1O15155 118 aa12.78□□□□□ -0.36
CDK5RAP3-237ENST00000585163 SLC25A12O75746 678 aa12.78□□□□□ -0.36
CDK5RAP3-237ENST00000585163 FCER2P06734 321 aa12.78□□□□□ -0.36
CDK5RAP3-237ENST00000585163 CD37P11049 281 aa12.78□□□□□ -0.36
CDK5RAP3-237ENST00000585163 IL12BP29460 328 aa12.78□□□□□ -0.36
CDK5RAP3-237ENST00000585163 TAS2R19P59542 299 aa12.78□□□□□ -0.36
CDK5RAP3-237ENST00000585163 MFGE8Q08431 387 aaPredicted RBP12.78□□□□□ -0.36
CDK5RAP3-237ENST00000585163 GK2Q14410 553 aaPredicted RBP12.78□□□□□ -0.36
CDK5RAP3-237ENST00000585163 GLT8D1Q68CQ7 371 aa12.78□□□□□ -0.36
CDK5RAP3-237ENST00000585163 KCTD18Q6PI47 426 aaPredicted RBP12.78□□□□□ -0.36
CDK5RAP3-237ENST00000585163 NDUFAF7Q7L592 441 aa12.78□□□□□ -0.36
CDK5RAP3-237ENST00000585163 SEH1LQ96EE3 360 aa12.78□□□□□ -0.36
CDK5RAP3-237ENST00000585163 TGM7Q96PF1 710 aa12.78□□□□□ -0.36
CDK5RAP3-237ENST00000585163 SLC38A3Q99624 504 aa12.78□□□□□ -0.36
CDK5RAP3-237ENST00000585163 AIFM2Q9BRQ8 373 aa12.78□□□□□ -0.36
CDK5RAP3-237ENST00000585163 NRSN2Q9GZP1 204 aa12.78□□□□□ -0.36
CDK5RAP3-237ENST00000585163 TXNIPQ9H3M7 391 aa12.78□□□□□ -0.36
CDK5RAP3-237ENST00000585163 UCK1Q9HA47 277 aa12.78□□□□□ -0.36
CDK5RAP3-237ENST00000585163 CKLFQ9UBR5 152 aa12.78□□□□□ -0.36
CDK5RAP3-237ENST00000585163 SESN1Q9Y6P5 492 aa12.78□□□□□ -0.36
CDK5RAP3-237ENST00000585163 A0A1W2PPC1 479 aa12.77□□□□□ -0.37
CDK5RAP3-237ENST00000585163 A0A1W2PPC4 97 aa12.77□□□□□ -0.37
CDK5RAP3-237ENST00000585163 A0A1W2PQD3 144 aa12.77□□□□□ -0.37
CDK5RAP3-237ENST00000585163 CDC14CA4D256 554 aa12.77□□□□□ -0.37
CDK5RAP3-237ENST00000585163 LILRA5A6NI73 299 aa12.77□□□□□ -0.37
CDK5RAP3-237ENST00000585163 POM121CA8CG34 1229 aa12.77□□□□□ -0.37
CDK5RAP3-237ENST00000585163 A8MXK9 166 aa12.77□□□□□ -0.37
CDK5RAP3-237ENST00000585163 ALG1L2C9J202 215 aa12.77□□□□□ -0.37
CDK5RAP3-237ENST00000585163 H3BUI4 141 aa12.77□□□□□ -0.37
CDK5RAP3-237ENST00000585163 EIF4E2O60573 245 aaKnown RBP12.77□□□□□ -0.37
CDK5RAP3-237ENST00000585163 NPIPB7O75200 414 aa12.77□□□□□ -0.37
CDK5RAP3-237ENST00000585163 OR6A2O95222 327 aa12.77□□□□□ -0.37
CDK5RAP3-237ENST00000585163 NUDT14O95848 222 aa12.77□□□□□ -0.37
CDK5RAP3-237ENST00000585163 LPLP06858 475 aa12.77□□□□□ -0.37
CDK5RAP3-237ENST00000585163 RPA2P15927 270 aa12.77□□□□□ -0.37
CDK5RAP3-237ENST00000585163 CTLA4P16410 223 aa12.77□□□□□ -0.37
CDK5RAP3-237ENST00000585163 IGFBP3P17936 291 aaPredicted RBP12.77□□□□□ -0.37
CDK5RAP3-237ENST00000585163 PGCP20142 388 aa12.77□□□□□ -0.37
CDK5RAP3-237ENST00000585163 HTR2CP28335 458 aa12.77□□□□□ -0.37
CDK5RAP3-237ENST00000585163 NUP62P37198 522 aaPredicted RBP12.77□□□□□ -0.37
CDK5RAP3-237ENST00000585163 STK11Q15831 433 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms