RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 M0R233 179 aa17.57■□□□□ 0.4
SS18-224ENST00000584083 LCKP06239 509 aa17.57■□□□□ 0.4
SS18-224ENST00000584083 CCNOP22674 350 aa17.57■□□□□ 0.4
SS18-224ENST00000584083 LOXL1Q08397 574 aaPredicted RBP17.57■□□□□ 0.4
SS18-224ENST00000584083 KRR1Q13601 381 aaKnown RBP17.57■□□□□ 0.4
SS18-224ENST00000584083 MESTQ5EB52 335 aa17.57■□□□□ 0.4
SS18-224ENST00000584083 GPR139Q6DWJ6 353 aa17.57■□□□□ 0.4
SS18-224ENST00000584083 RGS7BPQ6MZT1 257 aaPredicted RBP17.57■□□□□ 0.4
SS18-224ENST00000584083 FAM122BQ7Z309 247 aa17.57■□□□□ 0.4
SS18-224ENST00000584083 LRP11Q86VZ4 500 aa17.57■□□□□ 0.4
SS18-224ENST00000584083 ZDHHC21Q8IVQ6 265 aa17.57■□□□□ 0.4
SS18-224ENST00000584083 CPEB3Q8NE35 698 aaKnown RBP17.57■□□□□ 0.4
SS18-224ENST00000584083 AKR7LQ8NHP1 331 aa17.57■□□□□ 0.4
SS18-224ENST00000584083 RASD2Q96D21 266 aa17.57■□□□□ 0.4
SS18-224ENST00000584083 FOXN4Q96NZ1 517 aa17.57■□□□□ 0.4
SS18-224ENST00000584083 TPK1Q9H3S4 243 aa17.57■□□□□ 0.4
SS18-224ENST00000584083 REV1Q9UBZ9 1251 aa17.57■□□□□ 0.4
SS18-224ENST00000584083 TMCC3Q9ULS5 477 aa17.57■□□□□ 0.4
SS18-224ENST00000584083 A0A096LNT2 108 aa17.56■□□□□ 0.4
SS18-224ENST00000584083 A0A1W2PPW3 197 aa17.56■□□□□ 0.4
SS18-224ENST00000584083 PRSS37A4D1T9 235 aa17.56■□□□□ 0.4
SS18-224ENST00000584083 NDUFS8O00217 210 aa17.56■□□□□ 0.4
SS18-224ENST00000584083 SOCS2O14508 198 aa17.56■□□□□ 0.4
SS18-224ENST00000584083 AHCYL1O43865 530 aa17.56■□□□□ 0.4
SS18-224ENST00000584083 SNAP29O95721 258 aa17.56■□□□□ 0.4
SS18-224ENST00000584083 CST2P09228 141 aa17.56■□□□□ 0.4
SS18-224ENST00000584083 DAOP14920 347 aa17.56■□□□□ 0.4
SS18-224ENST00000584083 MSR1P21757 451 aa17.56■□□□□ 0.4
SS18-224ENST00000584083 USF1P22415 310 aaPredicted RBP17.56■□□□□ 0.4
SS18-224ENST00000584083 CALB2P22676 271 aa17.56■□□□□ 0.4
SS18-224ENST00000584083 STOMP27105 288 aa17.56■□□□□ 0.4
SS18-224ENST00000584083 SDHAP31040 664 aa17.56■□□□□ 0.4
SS18-224ENST00000584083 RRM2P31350 389 aa17.56■□□□□ 0.4
SS18-224ENST00000584083 RAD52P43351 418 aa17.56■□□□□ 0.4
SS18-224ENST00000584083 SELENOVP59797 346 aa17.56■□□□□ 0.4
SS18-224ENST00000584083 PCBD1P61457 104 aa17.56■□□□□ 0.4
SS18-224ENST00000584083 PSG4Q00888 419 aa17.56■□□□□ 0.4
SS18-224ENST00000584083 THSD4Q6ZMP0 1018 aa17.56■□□□□ 0.4
SS18-224ENST00000584083 RINLQ6ZS11 566 aa17.56■□□□□ 0.4
SS18-224ENST00000584083 FOXL2NBQ6ZUU3 175 aa17.56■□□□□ 0.4
SS18-224ENST00000584083 ARHGAP24Q8N264 748 aa17.56■□□□□ 0.4
SS18-224ENST00000584083 ICA1LQ8NDH6 482 aa17.56■□□□□ 0.4
SS18-224ENST00000584083 GPA33Q99795 319 aa17.56■□□□□ 0.4
SS18-224ENST00000584083 MS4A5Q9H3V2 200 aa17.56■□□□□ 0.4
SS18-224ENST00000584083 RERGLQ9H628 205 aa17.56■□□□□ 0.4
SS18-224ENST00000584083 NRIP3Q9NQ35 241 aa17.56■□□□□ 0.4
SS18-224ENST00000584083 YAE1D1Q9NRH1 226 aa17.56■□□□□ 0.4
SS18-224ENST00000584083 ACTR3BQ9P1U1 418 aa17.56■□□□□ 0.4
SS18-224ENST00000584083 IER3IP1Q9Y5U9 82 aa17.56■□□□□ 0.4
SS18-224ENST00000584083 C12orf71A8MTZ7 269 aa17.55■□□□□ 0.4
SS18-224ENST00000584083 CD5LO43866 347 aa17.55■□□□□ 0.4
SS18-224ENST00000584083 OR10H3O60404 316 aa17.55■□□□□ 0.4
SS18-224ENST00000584083 IGFBP1P08833 259 aaPredicted RBP17.55■□□□□ 0.4
SS18-224ENST00000584083 ATP6V1B2P21281 511 aa17.55■□□□□ 0.4
SS18-224ENST00000584083 IFNGR2P38484 337 aa17.55■□□□□ 0.4
SS18-224ENST00000584083 ALDH3B1P43353 468 aa17.55■□□□□ 0.4
SS18-224ENST00000584083 NR4A2P43354 598 aa17.55■□□□□ 0.4
SS18-224ENST00000584083 GDI2P50395 445 aaKnown RBP17.55■□□□□ 0.4
SS18-224ENST00000584083 UCP2P55851 309 aa17.55■□□□□ 0.4
SS18-224ENST00000584083 GGTLC2Q14390 218 aa17.55■□□□□ 0.4
SS18-224ENST00000584083 MAD2L1BPQ15013 274 aaPredicted RBP17.55■□□□□ 0.4
SS18-224ENST00000584083 TMEM249Q2WGJ8 235 aa17.55■□□□□ 0.4
SS18-224ENST00000584083 SMARCD3Q6STE5 483 aa17.55■□□□□ 0.4
SS18-224ENST00000584083 DPY19L2P2Q6ZN68 376 aa17.55■□□□□ 0.4
SS18-224ENST00000584083 ZER1Q7Z7L7 766 aa17.55■□□□□ 0.4
SS18-224ENST00000584083 ALDH16A1Q8IZ83 802 aa17.55■□□□□ 0.4
SS18-224ENST00000584083 C11orf40Q8WZ69 217 aa17.55■□□□□ 0.4
SS18-224ENST00000584083 GPX7Q96SL4 187 aaPredicted RBP17.55■□□□□ 0.4
SS18-224ENST00000584083 BCL2L14Q9BZR8 327 aa17.55■□□□□ 0.4
SS18-224ENST00000584083 OR2H1Q9GZK4 316 aa17.55■□□□□ 0.4
SS18-224ENST00000584083 POLE4Q9NR33 117 aa17.55■□□□□ 0.4
SS18-224ENST00000584083 MYEF2Q9P2K5 600 aaKnown RBP17.55■□□□□ 0.4
SS18-224ENST00000584083 EIF3KQ9UBQ5 218 aaKnown RBP17.55■□□□□ 0.4
SS18-224ENST00000584083 TIMM10BQ9Y5J6 103 aa17.55■□□□□ 0.4
SS18-224ENST00000584083 C5orf49A4QMS7 147 aa17.54■□□□□ 0.4
SS18-224ENST00000584083 TLX2O43763 284 aaPredicted RBP17.54■□□□□ 0.4
SS18-224ENST00000584083 RPS6KA3P51812 740 aa17.54■□□□□ 0.4
SS18-224ENST00000584083 FXYD6P3P58550 94 aa17.54■□□□□ 0.4
SS18-224ENST00000584083 KRTAP21-3Q3LHN1 58 aa17.54■□□□□ 0.4
SS18-224ENST00000584083 MTX3Q5HYI7 312 aa17.54■□□□□ 0.4
SS18-224ENST00000584083 SYNPRQ8TBG9 265 aa17.54■□□□□ 0.4
SS18-224ENST00000584083 FANK1Q8TC84 345 aa17.54■□□□□ 0.4
SS18-224ENST00000584083 UBASH3BQ8TF42 649 aa17.54■□□□□ 0.4
SS18-224ENST00000584083 ZNF416Q9BWM5 594 aa17.54■□□□□ 0.4
SS18-224ENST00000584083 EMC7Q9NPA0 242 aa17.54■□□□□ 0.4
SS18-224ENST00000584083 GPR160Q9UJ42 338 aa17.54■□□□□ 0.4
SS18-224ENST00000584083 VWC2LB2RUY7 222 aa17.53■□□□□ 0.4
SS18-224ENST00000584083 SLC16A7O60669 478 aa17.53■□□□□ 0.4
SS18-224ENST00000584083 PPP1R3DO95685 299 aa17.53■□□□□ 0.4
SS18-224ENST00000584083 T-ENOLP0DO92 83 aa17.53■□□□□ 0.4
SS18-224ENST00000584083 CTLA4P16410 223 aa17.53■□□□□ 0.4
SS18-224ENST00000584083 KLF3P57682 345 aaPredicted RBP17.53■□□□□ 0.4
SS18-224ENST00000584083 ERVS71-1P61550 626 aa17.53■□□□□ 0.4
SS18-224ENST00000584083 ENDOGQ14249 297 aaKnown RBP17.53■□□□□ 0.4
SS18-224ENST00000584083 NKPD1Q17RQ9 610 aa17.53■□□□□ 0.4
SS18-224ENST00000584083 ALKBH6Q3KRA9 238 aa17.53■□□□□ 0.4
SS18-224ENST00000584083 UGT2A3Q6UWM9 527 aa17.53■□□□□ 0.4
SS18-224ENST00000584083 ADCK1Q86TW2 530 aa17.53■□□□□ 0.4
SS18-224ENST00000584083 DHFR2Q86XF0 187 aa17.53■□□□□ 0.4
SS18-224ENST00000584083 ZNF540Q8NDQ6 660 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms