RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 IMPAD1Q9NX62 359 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 P4HTMQ9NXG6 502 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 B3GNT2Q9NY97 397 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 EPHA6Q9UF33 1036 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 SSR3Q9UNL2 185 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 DIMT1Q9UNQ2 313 aaKnown RBP3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 SLC22A14Q9Y267 594 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 CAB39Q9Y376 341 aaPredicted RBP3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 ASB4Q9Y574 426 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 TRPM7Q96QT4 1865 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 TDRD15B5MCY1 1934 aaKnown RBP3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 ZNF106Q9H2Y7 1883 aaKnown RBP3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 LOC100506127A0A0U1RQW1 187 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 LOC101059948A0A1B0GTJ6 334 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 LOC105371267A0A1B0GV96 52 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 TRDV1A0A1B0GX56 115 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 TMEM129A0AVI4 362 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 LINC00862A6NCI5 91 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 MGAT4DA6NG13 374 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 GPR89AB7ZAQ6 455 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 SGK494L7N484 410 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 TLR4O00206 839 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 FAAHO00519 579 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 COCHO43405 550 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 XRCC3O43542 346 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 SSX5O60225 188 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 TPST2O60704 377 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 ZNF780AO75290 641 aaPredicted RBP3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 ENTPD6O75354 484 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 CSO75390 466 aaKnown RBP3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 NME6O75414 186 aaPredicted RBP3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 PSIP1O75475 530 aaKnown RBP3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 RAD51DO75771 328 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 SNAPC5O75971 98 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 GLCEO94923 617 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 LRATO95237 230 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 GJB5O95377 273 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 DIRAS3O95661 229 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 CRYZL1O95825 349 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 HBQ1P09105 142 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 ANXA4P09525 319 aaPredicted RBP3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 ALPIP09923 528 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 DANCRP0C864 163 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 GPR89BP0CG08 455 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 PRG2P13727 222 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 ATP1B2P14415 290 aaPredicted RBP3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 ZNF30P17039 623 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 HMGA1P17096 107 aaKnown RBP3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 CD22P20273 847 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 CFL1P23528 166 aaKnown RBP3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 MYL9P24844 172 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 SLC6A6P31641 620 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 OR1G1P47890 313 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 NPBWR1P48145 328 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 IDH2P48735 452 aaKnown RBP3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 EVX1P49640 407 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 STK19P49842 368 aaPredicted RBP3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 SGSHP51688 502 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 ARFIP1P53367 373 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 AP2S1P53680 142 aaPredicted RBP3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 RHOAP61586 193 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 PPP3R1P63098 170 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 MRPS15P82914 257 aaKnown RBP3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 CDK6Q00534 326 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 CDK5Q00535 292 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 IRF8Q02556 426 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 DMPKQ09013 629 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 HSPA14Q0VDF9 509 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 PLA2G7Q13093 441 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 DOC2AQ14183 400 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 SF3A2Q15428 464 aaKnown RBP3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 MAJINQ3KP22 176 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 SMUG1Q53HV7 270 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 CLLU1OSQ5K130 101 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 PDZK1Q5T2W1 519 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 HACD4Q5VWC8 232 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 CST9Q5W186 159 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 SAXO2Q658L1 398 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 FAM71E1Q6IPT2 247 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 SLC8B1Q6J4K2 584 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 TRIM40Q6P9F5 258 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 PODNL1Q6PEZ8 512 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 FAM151BQ6UXP7 276 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 ZNF730Q6ZMV8 503 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 IDO2Q6ZQW0 420 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 TPGS1Q6ZTW0 290 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 RFPL4BQ6ZWI9 263 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 THOC6Q86W42 341 aaKnown RBP3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 ELMOD2Q8IZ81 293 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 SPERTQ8NA61 448 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 DCAF4L2Q8NA75 395 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 GPR26Q8NDV2 337 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 OR52E1Q8NGJ3 308 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 OR4A15Q8NGL6 344 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 OR9Q1Q8NGQ5 310 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 OR2AJ1Q8NGZ0 328 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 WDR36Q8NI36 951 aaKnown RBP3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 SPPL2AQ8TCT8 520 aa3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 RNASE8Q8TDE3 154 aaKnown RBP3.35□□□□□ -1.87
SMCHD1-208ENST00000583344 SETD7Q8WTS6 366 aaKnown RBP3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms