RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 MDP1Q86V88 176 aa6.09□□□□□ -1.43
CDK5RAP3-209ENST00000578663 DHFR2Q86XF0 187 aa6.09□□□□□ -1.43
CDK5RAP3-209ENST00000578663 WDFY1Q8IWB7 410 aa6.09□□□□□ -1.43
CDK5RAP3-209ENST00000578663 CADM2Q8N3J6 435 aa6.09□□□□□ -1.43
CDK5RAP3-209ENST00000578663 BHLHE22Q8NFJ8 381 aaPredicted RBP6.09□□□□□ -1.43
CDK5RAP3-209ENST00000578663 RASSF5Q8WWW0 418 aa6.09□□□□□ -1.43
CDK5RAP3-209ENST00000578663 GEMIN6Q8WXD5 167 aaKnown RBP6.09□□□□□ -1.43
CDK5RAP3-209ENST00000578663 LZICQ8WZA0 190 aa6.09□□□□□ -1.43
CDK5RAP3-209ENST00000578663 RAB1CQ92928 201 aa6.09□□□□□ -1.43
CDK5RAP3-209ENST00000578663 SLC35B4Q969S0 331 aa6.09□□□□□ -1.43
CDK5RAP3-209ENST00000578663 PYURFQ96I23 114 aa6.09□□□□□ -1.43
CDK5RAP3-209ENST00000578663 MCHR1Q99705 422 aa6.09□□□□□ -1.43
CDK5RAP3-209ENST00000578663 SYT3Q9BQG1 590 aa6.09□□□□□ -1.43
CDK5RAP3-209ENST00000578663 TRIM15Q9C019 465 aa6.09□□□□□ -1.43
CDK5RAP3-209ENST00000578663 MMADHCQ9H3L0 296 aaPredicted RBP6.09□□□□□ -1.43
CDK5RAP3-209ENST00000578663 DENND2DQ9H6A0 471 aaPredicted RBP6.09□□□□□ -1.43
CDK5RAP3-209ENST00000578663 ARMC7Q9H6L4 198 aa6.09□□□□□ -1.43
CDK5RAP3-209ENST00000578663 KLHL21Q9UJP4 597 aa6.09□□□□□ -1.43
CDK5RAP3-209ENST00000578663 PURGQ9UJV8 347 aaKnown RBP6.09□□□□□ -1.43
CDK5RAP3-209ENST00000578663 RPS6KA6Q9UK32 745 aa6.09□□□□□ -1.43
CDK5RAP3-209ENST00000578663 SAMD4AQ9UPU9 718 aaKnown RBP6.09□□□□□ -1.43
CDK5RAP3-209ENST00000578663 NOX1Q9Y5S8 564 aa6.09□□□□□ -1.43
CDK5RAP3-209ENST00000578663 HERC1Q15751 4861 aa6.08□□□□□ -1.44
CDK5RAP3-209ENST00000578663 TMED7-TICAM2A0A0A6YYA0 188 aa6.08□□□□□ -1.44
CDK5RAP3-209ENST00000578663 IGHV1-69-2A0A0G2JMI3 117 aa6.08□□□□□ -1.44
CDK5RAP3-209ENST00000578663 A0A1W2PPW3 197 aa6.08□□□□□ -1.44
CDK5RAP3-209ENST00000578663 TCRBV3S1A0A5B6 114 aa6.08□□□□□ -1.44
CDK5RAP3-209ENST00000578663 SLC22A23A1A5C7 686 aa6.08□□□□□ -1.44
CDK5RAP3-209ENST00000578663 CLPSL1A2RUU4 121 aa6.08□□□□□ -1.44
CDK5RAP3-209ENST00000578663 C5orf63A6NC05 138 aa6.08□□□□□ -1.44
CDK5RAP3-209ENST00000578663 ZNF503-AS2A6NEH8 195 aa6.08□□□□□ -1.44
CDK5RAP3-209ENST00000578663 AQP12BA6NM10 295 aa6.08□□□□□ -1.44
CDK5RAP3-209ENST00000578663 CPSF4LA6NMK7 179 aaKnown RBP6.08□□□□□ -1.44
CDK5RAP3-209ENST00000578663 J3KTA2 159 aa6.08□□□□□ -1.44
CDK5RAP3-209ENST00000578663 UPK3AO75631 287 aa6.08□□□□□ -1.44
CDK5RAP3-209ENST00000578663 CIB2O75838 187 aa6.08□□□□□ -1.44
CDK5RAP3-209ENST00000578663 ZNF432O94892 652 aa6.08□□□□□ -1.44
CDK5RAP3-209ENST00000578663 DIRAS1O95057 198 aa6.08□□□□□ -1.44
CDK5RAP3-209ENST00000578663 LYPD3O95274 346 aa6.08□□□□□ -1.44
CDK5RAP3-209ENST00000578663 MT-ND1P03886 318 aa6.08□□□□□ -1.44
CDK5RAP3-209ENST00000578663 THY1P04216 161 aa6.08□□□□□ -1.44
CDK5RAP3-209ENST00000578663 PPIAL4GP0DN37 164 aa6.08□□□□□ -1.44
CDK5RAP3-209ENST00000578663 ZNF35P13682 527 aa6.08□□□□□ -1.44
CDK5RAP3-209ENST00000578663 ZNF12P17014 697 aa6.08□□□□□ -1.44
CDK5RAP3-209ENST00000578663 ZNF14P17017 642 aaPredicted RBP6.08□□□□□ -1.44
CDK5RAP3-209ENST00000578663 CCNA2P20248 432 aa6.08□□□□□ -1.44
CDK5RAP3-209ENST00000578663 FUT4P22083 530 aa6.08□□□□□ -1.44
CDK5RAP3-209ENST00000578663 TACR3P29371 465 aa6.08□□□□□ -1.44
CDK5RAP3-209ENST00000578663 RAD52P43351 418 aa6.08□□□□□ -1.44
CDK5RAP3-209ENST00000578663 YAP1P46937 504 aaKnown RBP6.08□□□□□ -1.44
CDK5RAP3-209ENST00000578663 P2RY4P51582 365 aa6.08□□□□□ -1.44
CDK5RAP3-209ENST00000578663 ARF1P84077 181 aaKnown RBP6.08□□□□□ -1.44
CDK5RAP3-209ENST00000578663 MVKQ03426 396 aa6.08□□□□□ -1.44
CDK5RAP3-209ENST00000578663 HLXQ14774 488 aaPredicted RBP6.08□□□□□ -1.44
CDK5RAP3-209ENST00000578663 MAD2L1BPQ15013 274 aaPredicted RBP6.08□□□□□ -1.44
CDK5RAP3-209ENST00000578663 OR1Q1Q15612 314 aa6.08□□□□□ -1.44
CDK5RAP3-209ENST00000578663 TAF9Q16594 264 aa6.08□□□□□ -1.44
CDK5RAP3-209ENST00000578663 MTX3Q5HYI7 312 aa6.08□□□□□ -1.44
CDK5RAP3-209ENST00000578663 ENTPD8Q5MY95 495 aa6.08□□□□□ -1.44
CDK5RAP3-209ENST00000578663 AVPI1Q5T686 147 aa6.08□□□□□ -1.44
CDK5RAP3-209ENST00000578663 C1orf146Q5VVC0 180 aa6.08□□□□□ -1.44
CDK5RAP3-209ENST00000578663 WBP2NLQ6ICG8 309 aa6.08□□□□□ -1.44
CDK5RAP3-209ENST00000578663 CREB3L2Q70SY1 520 aa6.08□□□□□ -1.44
CDK5RAP3-209ENST00000578663 FKBP9P1Q75LS8 142 aa6.08□□□□□ -1.44
CDK5RAP3-209ENST00000578663 RANBP3LQ86VV4 465 aaPredicted RBP6.08□□□□□ -1.44
CDK5RAP3-209ENST00000578663 SPATA24Q86W54 205 aa6.08□□□□□ -1.44
CDK5RAP3-209ENST00000578663 AQP12AQ8IXF9 295 aa6.08□□□□□ -1.44
CDK5RAP3-209ENST00000578663 ADGRG5Q8IZF4 528 aa6.08□□□□□ -1.44
CDK5RAP3-209ENST00000578663 BCL6BQ8N143 479 aaPredicted RBP6.08□□□□□ -1.44
CDK5RAP3-209ENST00000578663 KIR3DL3Q8N743 410 aa6.08□□□□□ -1.44
CDK5RAP3-209ENST00000578663 TMEM99Q8N816 258 aa6.08□□□□□ -1.44
CDK5RAP3-209ENST00000578663 SNX33Q8WV41 574 aa6.08□□□□□ -1.44
CDK5RAP3-209ENST00000578663 DNAJA3Q96EY1 480 aa6.08□□□□□ -1.44
CDK5RAP3-209ENST00000578663 SLC47A1Q96FL8 570 aa6.08□□□□□ -1.44
CDK5RAP3-209ENST00000578663 C7orf34Q96L11 122 aa6.08□□□□□ -1.44
CDK5RAP3-209ENST00000578663 LRGUKQ96M69 825 aa6.08□□□□□ -1.44
CDK5RAP3-209ENST00000578663 SEPHS2Q99611 448 aa6.08□□□□□ -1.44
CDK5RAP3-209ENST00000578663 GAL3ST1Q99999 423 aa6.08□□□□□ -1.44
CDK5RAP3-209ENST00000578663 PRDM13Q9H4Q3 707 aa6.08□□□□□ -1.44
CDK5RAP3-209ENST00000578663 HINT3Q9NQE9 182 aaKnown RBP6.08□□□□□ -1.44
CDK5RAP3-209ENST00000578663 B3GNT2Q9NY97 397 aa6.08□□□□□ -1.44
CDK5RAP3-209ENST00000578663 MYEF2Q9P2K5 600 aaKnown RBP6.08□□□□□ -1.44
CDK5RAP3-209ENST00000578663 OSGIN1Q9UJX0 560 aa6.08□□□□□ -1.44
CDK5RAP3-209ENST00000578663 FBXL3Q9UKT7 428 aa6.08□□□□□ -1.44
CDK5RAP3-209ENST00000578663 A4GNTQ9UNA3 340 aa6.08□□□□□ -1.44
CDK5RAP3-209ENST00000578663 RASD1Q9Y272 281 aa6.08□□□□□ -1.44
CDK5RAP3-209ENST00000578663 TMED7Q9Y3B3 224 aa6.08□□□□□ -1.44
CDK5RAP3-209ENST00000578663 AUP1Q9Y679 476 aa6.08□□□□□ -1.44
CDK5RAP3-209ENST00000578663 ENPP4Q9Y6X5 453 aa6.08□□□□□ -1.44
CDK5RAP3-209ENST00000578663 IGKV1D-42A0A075B6H8 117 aa6.07□□□□□ -1.44
CDK5RAP3-209ENST00000578663 IGLV3-9A0A075B6K5 115 aa6.07□□□□□ -1.44
CDK5RAP3-209ENST00000578663 A0A0B4J2E0 115 aa6.07□□□□□ -1.44
CDK5RAP3-209ENST00000578663 LCE6AA0A183 80 aa6.07□□□□□ -1.44
CDK5RAP3-209ENST00000578663 A0A1B0GX12 115 aa6.07□□□□□ -1.44
CDK5RAP3-209ENST00000578663 DHRS12A0PJE2 317 aa6.07□□□□□ -1.44
CDK5RAP3-209ENST00000578663 TMEM72A0PK05 275 aa6.07□□□□□ -1.44
CDK5RAP3-209ENST00000578663 ZC3H12DA2A288 527 aaKnown RBP6.07□□□□□ -1.44
CDK5RAP3-209ENST00000578663 FAM181BA6NEQ2 426 aa6.07□□□□□ -1.44
CDK5RAP3-209ENST00000578663 A8MXK9 166 aa6.07□□□□□ -1.44
CDK5RAP3-209ENST00000578663 ZNF99A8MXY4 864 aaPredicted RBP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms