RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 KLHL14Q9P2G3 628 aa4.93□□□□□ -1.62
SMG6-219ENST00000575663 MIOXQ9UGB7 285 aa4.93□□□□□ -1.62
SMG6-219ENST00000575663 LOC102725191A0A1B0GVB3 256 aa4.92□□□□□ -1.62
SMG6-219ENST00000575663 CDHR4A6H8M9 788 aa4.92□□□□□ -1.62
SMG6-219ENST00000575663 ZSCAN5BA6NJL1 495 aa4.92□□□□□ -1.62
SMG6-219ENST00000575663 G3V2L1 256 aa4.92□□□□□ -1.62
SMG6-219ENST00000575663 H3BSA7 217 aa4.92□□□□□ -1.62
SMG6-219ENST00000575663 M0QX08 132 aa4.92□□□□□ -1.62
SMG6-219ENST00000575663 P2RY10O00398 339 aa4.92□□□□□ -1.62
SMG6-219ENST00000575663 TNFRSF13BO14836 293 aaPredicted RBP4.92□□□□□ -1.62
SMG6-219ENST00000575663 CASQ2O14958 399 aaPredicted RBP4.92□□□□□ -1.62
SMG6-219ENST00000575663 SURF4O15260 269 aa4.92□□□□□ -1.62
SMG6-219ENST00000575663 ENSAO43768 121 aaKnown RBP4.92□□□□□ -1.62
SMG6-219ENST00000575663 HNRNPCL1O60812 293 aaKnown RBP4.92□□□□□ -1.62
SMG6-219ENST00000575663 DCTN3O75935 186 aa4.92□□□□□ -1.62
SMG6-219ENST00000575663 TSPAN9O75954 239 aa4.92□□□□□ -1.62
SMG6-219ENST00000575663 FGF4P08620 206 aa4.92□□□□□ -1.62
SMG6-219ENST00000575663 PATE4P0C8F1 98 aa4.92□□□□□ -1.62
SMG6-219ENST00000575663 GKN3PP0CG01 181 aa4.92□□□□□ -1.62
SMG6-219ENST00000575663 RPS4Y1P22090 263 aaKnown RBP4.92□□□□□ -1.62
SMG6-219ENST00000575663 CCNOP22674 350 aa4.92□□□□□ -1.62
SMG6-219ENST00000575663 ARRB2P32121 409 aa4.92□□□□□ -1.62
SMG6-219ENST00000575663 BLVRAP53004 296 aa4.92□□□□□ -1.62
SMG6-219ENST00000575663 AQP5P55064 265 aa4.92□□□□□ -1.62
SMG6-219ENST00000575663 PCBP3P57721 371 aaKnown RBP4.92□□□□□ -1.62
SMG6-219ENST00000575663 FGF12P61328 243 aa4.92□□□□□ -1.62
SMG6-219ENST00000575663 TXNL4AP83876 142 aaKnown RBP4.92□□□□□ -1.62
SMG6-219ENST00000575663 PAX2Q02962 417 aa4.92□□□□□ -1.62
SMG6-219ENST00000575663 HSF2Q03933 536 aa4.92□□□□□ -1.62
SMG6-219ENST00000575663 ZMYND11Q15326 602 aa4.92□□□□□ -1.62
SMG6-219ENST00000575663 PGS1Q32NB8 556 aa4.92□□□□□ -1.62
SMG6-219ENST00000575663 LRRC23Q53EV4 343 aaPredicted RBP4.92□□□□□ -1.62
SMG6-219ENST00000575663 XKR7Q5GH72 579 aa4.92□□□□□ -1.62
SMG6-219ENST00000575663 COX20Q5RI15 118 aa4.92□□□□□ -1.62
SMG6-219ENST00000575663 SPATA46Q5T0L3 261 aa4.92□□□□□ -1.62
SMG6-219ENST00000575663 ARMC4Q5T2S8 1044 aa4.92□□□□□ -1.62
SMG6-219ENST00000575663 MBNL2Q5VZF2 373 aaKnown RBP4.92□□□□□ -1.62
SMG6-219ENST00000575663 KANK2Q63ZY3 851 aa4.92□□□□□ -1.62
SMG6-219ENST00000575663 C11orf88Q6PI97 169 aa4.92□□□□□ -1.62
SMG6-219ENST00000575663 LRRC74BQ6ZQY2 392 aa4.92□□□□□ -1.62
SMG6-219ENST00000575663 H1FNTQ75WM6 255 aaPredicted RBP4.92□□□□□ -1.62
SMG6-219ENST00000575663 SLC16A14Q7RTX9 510 aa4.92□□□□□ -1.62
SMG6-219ENST00000575663 NET1Q7Z628 596 aaPredicted RBP4.92□□□□□ -1.62
SMG6-219ENST00000575663 LDLRAD3Q86YD5 345 aa4.92□□□□□ -1.62
SMG6-219ENST00000575663 KLBQ86Z14 1044 aa4.92□□□□□ -1.62
SMG6-219ENST00000575663 CLECL1Q8IZS7 167 aa4.92□□□□□ -1.62
SMG6-219ENST00000575663 SLC7A5P1Q8MH63 180 aa4.92□□□□□ -1.62
SMG6-219ENST00000575663 CLEC4FQ8N1N0 589 aa4.92□□□□□ -1.62
SMG6-219ENST00000575663 LILRB2Q8N423 598 aa4.92□□□□□ -1.62
SMG6-219ENST00000575663 SLC22A24Q8N4F4 322 aa4.92□□□□□ -1.62
SMG6-219ENST00000575663 PAQR4Q8N4S7 273 aaPredicted RBP4.92□□□□□ -1.62
SMG6-219ENST00000575663 CCDC63Q8NA47 563 aa4.92□□□□□ -1.62
SMG6-219ENST00000575663 SPERTQ8NA61 448 aa4.92□□□□□ -1.62
SMG6-219ENST00000575663 SCCPDHQ8NBX0 429 aa4.92□□□□□ -1.62
SMG6-219ENST00000575663 HIPK4Q8NE63 616 aa4.92□□□□□ -1.62
SMG6-219ENST00000575663 OR8B3Q8NGG8 313 aa4.92□□□□□ -1.62
SMG6-219ENST00000575663 TWIST2Q8WVJ9 160 aa4.92□□□□□ -1.62
SMG6-219ENST00000575663 ZG16BQ96DA0 208 aa4.92□□□□□ -1.62
SMG6-219ENST00000575663 NEIL1Q96FI4 390 aaPredicted RBP4.92□□□□□ -1.62
SMG6-219ENST00000575663 SAMD8Q96LT4 415 aa4.92□□□□□ -1.62
SMG6-219ENST00000575663 OR8B2Q96RD0 313 aa4.92□□□□□ -1.62
SMG6-219ENST00000575663 ARHGDIGQ99819 225 aa4.92□□□□□ -1.62
SMG6-219ENST00000575663 PCGF1Q9BSM1 259 aa4.92□□□□□ -1.62
SMG6-219ENST00000575663 C1orf50Q9BV19 199 aa4.92□□□□□ -1.62
SMG6-219ENST00000575663 EMC6Q9BV81 110 aa4.92□□□□□ -1.62
SMG6-219ENST00000575663 PTDSS2Q9BVG9 487 aa4.92□□□□□ -1.62
SMG6-219ENST00000575663 ASPNQ9BXN1 380 aa4.92□□□□□ -1.62
SMG6-219ENST00000575663 SLC38A1Q9H2H9 487 aa4.92□□□□□ -1.62
SMG6-219ENST00000575663 TUBB1Q9H4B7 451 aa4.92□□□□□ -1.62
SMG6-219ENST00000575663 ARMC7Q9H6L4 198 aa4.92□□□□□ -1.62
SMG6-219ENST00000575663 TNFRSF12AQ9NP84 129 aa4.92□□□□□ -1.62
SMG6-219ENST00000575663 SLC17A7Q9P2U7 560 aa4.92□□□□□ -1.62
SMG6-219ENST00000575663 EIF3KQ9UBQ5 218 aaKnown RBP4.92□□□□□ -1.62
SMG6-219ENST00000575663 RPS6KB2Q9UBS0 482 aa4.92□□□□□ -1.62
SMG6-219ENST00000575663 MARCOQ9UEW3 520 aaPredicted RBP4.92□□□□□ -1.62
SMG6-219ENST00000575663 EMCNQ9ULC0 261 aa4.92□□□□□ -1.62
SMG6-219ENST00000575663 GTF2A1LQ9UNN4 478 aa4.92□□□□□ -1.62
SMG6-219ENST00000575663 PPP1R3CQ9UQK1 317 aa4.92□□□□□ -1.62
SMG6-219ENST00000575663 ARL2BPQ9Y2Y0 163 aa4.92□□□□□ -1.62
SMG6-219ENST00000575663 RAP2CQ9Y3L5 183 aa4.92□□□□□ -1.62
SMG6-219ENST00000575663 USH1CQ9Y6N9 552 aa4.92□□□□□ -1.62
SMG6-219ENST00000575663 TRAV36DV7A0A075B6V5 113 aa4.91□□□□□ -1.62
SMG6-219ENST00000575663 ZNF816-ZNF321PA0A0X1KG74 233 aa4.91□□□□□ -1.62
SMG6-219ENST00000575663 KIR2DS1A0A191URI9 304 aa4.91□□□□□ -1.62
SMG6-219ENST00000575663 ANKRD61A6NGH8 418 aa4.91□□□□□ -1.62
SMG6-219ENST00000575663 E9PQ18 207 aa4.91□□□□□ -1.62
SMG6-219ENST00000575663 C3orf84H3BNL1 204 aa4.91□□□□□ -1.62
SMG6-219ENST00000575663 IFNL4K9M1U5 179 aa4.91□□□□□ -1.62
SMG6-219ENST00000575663 SLC22A2O15244 555 aa4.91□□□□□ -1.62
SMG6-219ENST00000575663 TIMM8AO60220 97 aaPredicted RBP4.91□□□□□ -1.62
SMG6-219ENST00000575663 CCDC22O60826 627 aa4.91□□□□□ -1.62
SMG6-219ENST00000575663 FZD7O75084 574 aa4.91□□□□□ -1.62
SMG6-219ENST00000575663 PEX11AO75192 247 aa4.91□□□□□ -1.62
SMG6-219ENST00000575663 ATP5HO75947 161 aa4.91□□□□□ -1.62
SMG6-219ENST00000575663 IGHV4-59P01825 116 aa4.91□□□□□ -1.62
SMG6-219ENST00000575663 WNT2P09544 360 aa4.91□□□□□ -1.62
SMG6-219ENST00000575663 NR2F1P10589 423 aa4.91□□□□□ -1.62
SMG6-219ENST00000575663 EPHA3P29320 983 aa4.91□□□□□ -1.62
SMG6-219ENST00000575663 GRPRP30550 384 aa4.91□□□□□ -1.62
SMG6-219ENST00000575663 GABRA5P31644 462 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms