RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 HIST3H3Q16695 136 aa7.57□□□□□ -1.2
SMG6-218ENST00000575454 SPATA46Q5T0L3 261 aa7.57□□□□□ -1.2
SMG6-218ENST00000575454 ZNF613Q6PF04 617 aa7.57□□□□□ -1.2
SMG6-218ENST00000575454 ZNF101Q8IZC7 436 aa7.57□□□□□ -1.2
SMG6-218ENST00000575454 LRRC18Q8N456 261 aa7.57□□□□□ -1.2
SMG6-218ENST00000575454 VANGL1Q8TAA9 524 aaPredicted RBP7.57□□□□□ -1.2
SMG6-218ENST00000575454 ABHD4Q8TB40 342 aa7.57□□□□□ -1.2
SMG6-218ENST00000575454 SLC25A40Q8TBP6 338 aa7.57□□□□□ -1.2
SMG6-218ENST00000575454 GEMIN6Q8WXD5 167 aaKnown RBP7.57□□□□□ -1.2
SMG6-218ENST00000575454 MCHR2Q969V1 340 aa7.57□□□□□ -1.2
SMG6-218ENST00000575454 VPS33AQ96AX1 596 aa7.57□□□□□ -1.2
SMG6-218ENST00000575454 PLEKHA8Q96JA3 519 aa7.57□□□□□ -1.2
SMG6-218ENST00000575454 FAM71F1Q96KD3 344 aaPredicted RBP7.57□□□□□ -1.2
SMG6-218ENST00000575454 POM121L2Q96KW2 1035 aa7.57□□□□□ -1.2
SMG6-218ENST00000575454 SORT1Q99523 831 aa7.57□□□□□ -1.2
SMG6-218ENST00000575454 RBM4BQ9BQ04 359 aaKnown RBP7.57□□□□□ -1.2
SMG6-218ENST00000575454 OR2J1Q9GZK6 312 aa7.57□□□□□ -1.2
SMG6-218ENST00000575454 C20orf27Q9GZN8 174 aa7.57□□□□□ -1.2
SMG6-218ENST00000575454 SMURF2Q9HAU4 748 aa7.57□□□□□ -1.2
SMG6-218ENST00000575454 SSU72Q9NP77 194 aaKnown RBP7.57□□□□□ -1.2
SMG6-218ENST00000575454 SLCO1B3Q9NPD5 702 aa7.57□□□□□ -1.2
SMG6-218ENST00000575454 NANSQ9NR45 359 aa7.57□□□□□ -1.2
SMG6-218ENST00000575454 SDR39U1Q9NRG7 319 aaPredicted RBP7.57□□□□□ -1.2
SMG6-218ENST00000575454 PNPOQ9NVS9 261 aa7.57□□□□□ -1.2
SMG6-218ENST00000575454 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.57□□□□□ -1.2
SMG6-218ENST00000575454 PPP1R3CQ9UQK1 317 aa7.57□□□□□ -1.2
SMG6-218ENST00000575454 KIR2DS1A0A191URI9 304 aa7.56□□□□□ -1.2
SMG6-218ENST00000575454 A0A1W2PRG6 482 aa7.56□□□□□ -1.2
SMG6-218ENST00000575454 SLC22A31A6NKX4 558 aa7.56□□□□□ -1.2
SMG6-218ENST00000575454 MCIDASD6RGH6 385 aa7.56□□□□□ -1.2
SMG6-218ENST00000575454 SDHDO14521 159 aa7.56□□□□□ -1.2
SMG6-218ENST00000575454 HDAC3O15379 428 aa7.56□□□□□ -1.2
SMG6-218ENST00000575454 CHP2O43745 196 aa7.56□□□□□ -1.2
SMG6-218ENST00000575454 ERLIN1O75477 346 aa7.56□□□□□ -1.2
SMG6-218ENST00000575454 CH25HO95992 272 aa7.56□□□□□ -1.2
SMG6-218ENST00000575454 GSTM3P21266 225 aa7.56□□□□□ -1.2
SMG6-218ENST00000575454 EPHA3P29320 983 aa7.56□□□□□ -1.2
SMG6-218ENST00000575454 WNT5AP41221 380 aa7.56□□□□□ -1.2
SMG6-218ENST00000575454 GUCA1AP43080 201 aaPredicted RBP7.56□□□□□ -1.2
SMG6-218ENST00000575454 DAP3P51398 398 aaKnown RBP7.56□□□□□ -1.2
SMG6-218ENST00000575454 POLR2JP52435 117 aaKnown RBP7.56□□□□□ -1.2
SMG6-218ENST00000575454 PCBD1P61457 104 aa7.56□□□□□ -1.2
SMG6-218ENST00000575454 PPP1CBP62140 327 aa7.56□□□□□ -1.2
SMG6-218ENST00000575454 MRPS34P82930 218 aaKnown RBP7.56□□□□□ -1.2
SMG6-218ENST00000575454 ZNF74Q16587 644 aa7.56□□□□□ -1.2
SMG6-218ENST00000575454 TAF9Q16594 264 aa7.56□□□□□ -1.2
SMG6-218ENST00000575454 GTDC1Q4AE62 458 aa7.56□□□□□ -1.2
SMG6-218ENST00000575454 TTMPQ5BVD1 217 aa7.56□□□□□ -1.2
SMG6-218ENST00000575454 C10orf128Q5T292 105 aa7.56□□□□□ -1.2
SMG6-218ENST00000575454 GCNT6Q5T4J0 391 aa7.56□□□□□ -1.2
SMG6-218ENST00000575454 NXNQ6DKJ4 435 aa7.56□□□□□ -1.2
SMG6-218ENST00000575454 TTC33Q6PID6 262 aaPredicted RBP7.56□□□□□ -1.2
SMG6-218ENST00000575454 FIP1L1Q6UN15 594 aaKnown RBP7.56□□□□□ -1.2
SMG6-218ENST00000575454 LINC00114Q6XXX2 140 aa7.56□□□□□ -1.2
SMG6-218ENST00000575454 ZNF620Q6ZNG0 422 aa7.56□□□□□ -1.2
SMG6-218ENST00000575454 ARMC8Q8IUR7 673 aa7.56□□□□□ -1.2
SMG6-218ENST00000575454 GOLGA6L1Q8N7Z2 621 aa7.56□□□□□ -1.2
SMG6-218ENST00000575454 OR10S1Q8NGN2 331 aa7.56□□□□□ -1.2
SMG6-218ENST00000575454 NFKBIDQ8NI38 313 aa7.56□□□□□ -1.2
SMG6-218ENST00000575454 RAB40AQ8WXH6 277 aa7.56□□□□□ -1.2
SMG6-218ENST00000575454 GTF2H4Q92759 462 aa7.56□□□□□ -1.2
SMG6-218ENST00000575454 SEPHS2Q99611 448 aa7.56□□□□□ -1.2
SMG6-218ENST00000575454 ARHGDIGQ99819 225 aa7.56□□□□□ -1.2
SMG6-218ENST00000575454 SSBP3Q9BWW4 388 aaPredicted RBP7.56□□□□□ -1.2
SMG6-218ENST00000575454 MRPL13Q9BYD1 178 aaKnown RBP7.56□□□□□ -1.2
SMG6-218ENST00000575454 MSL2Q9HCI7 577 aa7.56□□□□□ -1.2
SMG6-218ENST00000575454 KIF17Q9P2E2 1029 aa7.56□□□□□ -1.2
SMG6-218ENST00000575454 MIOXQ9UGB7 285 aa7.56□□□□□ -1.2
SMG6-218ENST00000575454 IL19Q9UHD0 177 aa7.56□□□□□ -1.2
SMG6-218ENST00000575454 TIMM10BQ9Y5J6 103 aa7.56□□□□□ -1.2
SMG6-218ENST00000575454 POMT1Q9Y6A1 747 aa7.56□□□□□ -1.2
SMG6-218ENST00000575454 LOC100509620A0A075B734 347 aa7.55□□□□□ -1.2
SMG6-218ENST00000575454 IGHV3OR16-10A0A075B7F0 116 aa7.55□□□□□ -1.2
SMG6-218ENST00000575454 IGHV2-70DA0A0C4DH43 119 aa7.55□□□□□ -1.2
SMG6-218ENST00000575454 CEACAM18A8MTB9 384 aa7.55□□□□□ -1.2
SMG6-218ENST00000575454 TPST1O60507 370 aa7.55□□□□□ -1.2
SMG6-218ENST00000575454 WNT2P09544 360 aa7.55□□□□□ -1.2
SMG6-218ENST00000575454 SELEP16581 610 aa7.55□□□□□ -1.2
SMG6-218ENST00000575454 BGNP21810 368 aa7.55□□□□□ -1.2
SMG6-218ENST00000575454 SLC6A2P23975 617 aa7.55□□□□□ -1.2
SMG6-218ENST00000575454 ZNF133P52736 654 aaPredicted RBP7.55□□□□□ -1.2
SMG6-218ENST00000575454 SEC61A1P61619 476 aaKnown RBP7.55□□□□□ -1.2
SMG6-218ENST00000575454 GNB2P62879 340 aa7.55□□□□□ -1.2
SMG6-218ENST00000575454 PAX2Q02962 417 aa7.55□□□□□ -1.2
SMG6-218ENST00000575454 SRSF4Q08170 494 aaKnown RBP7.55□□□□□ -1.2
SMG6-218ENST00000575454 MELKQ14680 651 aa7.55□□□□□ -1.2
SMG6-218ENST00000575454 ZMYND11Q15326 602 aa7.55□□□□□ -1.2
SMG6-218ENST00000575454 TAF11Q15544 211 aa7.55□□□□□ -1.2
SMG6-218ENST00000575454 DEFB112Q30KQ8 113 aa7.55□□□□□ -1.2
SMG6-218ENST00000575454 GPR157Q5UAW9 335 aa7.55□□□□□ -1.2
SMG6-218ENST00000575454 FAM27BQ5VT28 67 aa7.55□□□□□ -1.2
SMG6-218ENST00000575454 ASPHD2Q6ICH7 369 aa7.55□□□□□ -1.2
SMG6-218ENST00000575454 SLC27A4Q6P1M0 643 aa7.55□□□□□ -1.2
SMG6-218ENST00000575454 Q6YL49 198 aa7.55□□□□□ -1.2
SMG6-218ENST00000575454 RHOUQ7L0Q8 258 aa7.55□□□□□ -1.2
SMG6-218ENST00000575454 NLRC3Q7RTR2 1065 aa7.55□□□□□ -1.2
SMG6-218ENST00000575454 NANOGNBQ7Z5D8 188 aa7.55□□□□□ -1.2
SMG6-218ENST00000575454 PTOV1Q86YD1 416 aa7.55□□□□□ -1.2
SMG6-218ENST00000575454 NPEPL1Q8NDH3 523 aa7.55□□□□□ -1.2
SMG6-218ENST00000575454 NOXO1Q8NFA2 376 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms