RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 LOXL2Q9Y4K0 774 aa12.56□□□□□ -0.4
VPS33B-208ENST00000574755 CACNG2Q9Y698 323 aa12.56□□□□□ -0.4
VPS33B-208ENST00000574755 LNP1A1A4G5 178 aa12.56□□□□□ -0.4
VPS33B-208ENST00000574755 HMX3A6NHT5 357 aa12.56□□□□□ -0.4
VPS33B-208ENST00000574755 MASP2O00187 686 aa12.56□□□□□ -0.4
VPS33B-208ENST00000574755 CCL3P10147 92 aa12.56□□□□□ -0.4
VPS33B-208ENST00000574755 NKX2-5P52952 324 aaPredicted RBP12.56□□□□□ -0.4
VPS33B-208ENST00000574755 CLDN20P56880 219 aa12.56□□□□□ -0.4
VPS33B-208ENST00000574755 TMEM176BQ3YBM2 270 aaPredicted RBP12.56□□□□□ -0.4
VPS33B-208ENST00000574755 TBRG1Q3YBR2 411 aa12.56□□□□□ -0.4
VPS33B-208ENST00000574755 RPS19BP1Q86WX3 136 aaKnown RBP12.56□□□□□ -0.4
VPS33B-208ENST00000574755 THRSPQ92748 146 aa12.56□□□□□ -0.4
VPS33B-208ENST00000574755 YIPF5Q969M3 257 aa12.56□□□□□ -0.4
VPS33B-208ENST00000574755 PPP1R14AQ96A00 147 aa12.56□□□□□ -0.4
VPS33B-208ENST00000574755 ZBTB8AQ96BR9 441 aa12.56□□□□□ -0.4
VPS33B-208ENST00000574755 SLC25A38Q96DW6 304 aa12.56□□□□□ -0.4
VPS33B-208ENST00000574755 RBP7Q96R05 134 aa12.56□□□□□ -0.4
VPS33B-208ENST00000574755 PADI1Q9ULC6 663 aa12.56□□□□□ -0.4
VPS33B-208ENST00000574755 PAIP2BQ9ULR5 123 aaKnown RBP12.56□□□□□ -0.4
VPS33B-208ENST00000574755 MED12Q93074 2177 aa12.55□□□□□ -0.4
VPS33B-208ENST00000574755 NCOR1O75376 2440 aa12.55□□□□□ -0.4
VPS33B-208ENST00000574755 A8MV72 311 aaPredicted RBP12.55□□□□□ -0.4
VPS33B-208ENST00000574755 CALCBP10092 127 aa12.55□□□□□ -0.4
VPS33B-208ENST00000574755 SLC6A1P30531 599 aa12.55□□□□□ -0.4
VPS33B-208ENST00000574755 RPS18P62269 152 aaKnown RBP12.55□□□□□ -0.4
VPS33B-208ENST00000574755 ATAD3CQ5T2N8 411 aa12.55□□□□□ -0.4
VPS33B-208ENST00000574755 TMEM81Q6P7N7 255 aa12.55□□□□□ -0.4
VPS33B-208ENST00000574755 PRSS45Q7RTY3 260 aa12.55□□□□□ -0.4
VPS33B-208ENST00000574755 SERPINA12Q8IW75 414 aa12.55□□□□□ -0.4
VPS33B-208ENST00000574755 MCHR2Q969V1 340 aa12.55□□□□□ -0.4
VPS33B-208ENST00000574755 JSRP1Q96MG2 331 aaPredicted RBP12.55□□□□□ -0.4
VPS33B-208ENST00000574755 GNRHR2Q96P88 292 aa12.55□□□□□ -0.4
VPS33B-208ENST00000574755 MARVELD1Q9BSK0 173 aa12.55□□□□□ -0.4
VPS33B-208ENST00000574755 OR5V1Q9UGF6 321 aa12.55□□□□□ -0.4
VPS33B-208ENST00000574755 ORC5O43913 435 aa12.55□□□□□ -0.4
VPS33B-208ENST00000574755 AQP8O94778 261 aa12.55□□□□□ -0.4
VPS33B-208ENST00000574755 TRAPPC2P0DI81 140 aa12.55□□□□□ -0.4
VPS33B-208ENST00000574755 TRAPPC2BP0DI82 140 aa12.55□□□□□ -0.4
VPS33B-208ENST00000574755 TCN2P20062 427 aa12.55□□□□□ -0.4
VPS33B-208ENST00000574755 CLRN1P58418 232 aa12.55□□□□□ -0.4
VPS33B-208ENST00000574755 CAMK2DQ13557 499 aa12.55□□□□□ -0.4
VPS33B-208ENST00000574755 KCNJ8Q15842 424 aa12.55□□□□□ -0.4
VPS33B-208ENST00000574755 ZNF528Q3MIS6 628 aa12.55□□□□□ -0.4
VPS33B-208ENST00000574755 SLC36A2Q495M3 483 aa12.55□□□□□ -0.4
VPS33B-208ENST00000574755 SLC22A10Q63ZE4 541 aa12.55□□□□□ -0.4
VPS33B-208ENST00000574755 CORO6Q6QEF8 472 aa12.55□□□□□ -0.4
VPS33B-208ENST00000574755 LINGO2Q7L985 606 aa12.55□□□□□ -0.4
VPS33B-208ENST00000574755 GLB1L2Q8IW92 636 aa12.55□□□□□ -0.4
VPS33B-208ENST00000574755 ADPRHL1Q8NDY3 354 aa12.55□□□□□ -0.4
VPS33B-208ENST00000574755 OR10H5Q8NGA6 315 aa12.55□□□□□ -0.4
VPS33B-208ENST00000574755 SYNPRQ8TBG9 265 aa12.55□□□□□ -0.4
VPS33B-208ENST00000574755 ST7LQ8TDW4 575 aa12.55□□□□□ -0.4
VPS33B-208ENST00000574755 ANGPTL4Q9BY76 406 aa12.55□□□□□ -0.4
VPS33B-208ENST00000574755 HPF1Q9NWY4 346 aa12.55□□□□□ -0.4
VPS33B-208ENST00000574755 NUFIP1Q9UHK0 495 aaKnown RBP12.55□□□□□ -0.4
VPS33B-208ENST00000574755 POU2F3Q9UKI9 436 aa12.55□□□□□ -0.4
VPS33B-208ENST00000574755 FBXL3Q9UKT7 428 aa12.55□□□□□ -0.4
VPS33B-208ENST00000574755 EMC9Q9Y3B6 208 aa12.55□□□□□ -0.4
VPS33B-208ENST00000574755 HDGFL3Q9Y3E1 203 aa12.55□□□□□ -0.4
VPS33B-208ENST00000574755 CENPXA8MT69 81 aa12.54□□□□□ -0.4
VPS33B-208ENST00000574755 G3V3Y1 287 aa12.54□□□□□ -0.4
VPS33B-208ENST00000574755 FKBP2P26885 142 aaKnown RBP12.54□□□□□ -0.4
VPS33B-208ENST00000574755 OTX2P32243 289 aa12.54□□□□□ -0.4
VPS33B-208ENST00000574755 DDOSTP39656 456 aa12.54□□□□□ -0.4
VPS33B-208ENST00000574755 P2RY4P51582 365 aa12.54□□□□□ -0.4
VPS33B-208ENST00000574755 PCK2Q16822 640 aa12.54□□□□□ -0.4
VPS33B-208ENST00000574755 MTFR2Q6P444 385 aa12.54□□□□□ -0.4
VPS33B-208ENST00000574755 LRFN4Q6PJG9 635 aa12.54□□□□□ -0.4
VPS33B-208ENST00000574755 CATSPERDQ86XM0 798 aa12.54□□□□□ -0.4
VPS33B-208ENST00000574755 DND1Q8IYX4 353 aaKnown RBP12.54□□□□□ -0.4
VPS33B-208ENST00000574755 PAQR8Q8TEZ7 354 aa12.54□□□□□ -0.4
VPS33B-208ENST00000574755 CREB3L1Q96BA8 519 aa12.54□□□□□ -0.4
VPS33B-208ENST00000574755 S100A16Q96FQ6 103 aaKnown RBP12.54□□□□□ -0.4
VPS33B-208ENST00000574755 MRPL13Q9BYD1 178 aaKnown RBP12.54□□□□□ -0.4
VPS33B-208ENST00000574755 STRADBQ9C0K7 418 aa12.54□□□□□ -0.4
VPS33B-208ENST00000574755 KLHL9Q9P2J3 617 aa12.54□□□□□ -0.4
VPS33B-208ENST00000574755 TCFL5Q9UL49 500 aa12.54□□□□□ -0.4
VPS33B-208ENST00000574755 DHDHQ9UQ10 334 aa12.54□□□□□ -0.4
VPS33B-208ENST00000574755 ALG5Q9Y673 324 aa12.54□□□□□ -0.4
VPS33B-208ENST00000574755 A0A087WZY1 265 aa12.54□□□□□ -0.4
VPS33B-208ENST00000574755 ZNF814B7Z6K7 855 aa12.54□□□□□ -0.4
VPS33B-208ENST00000574755 H0YC42 278 aa12.54□□□□□ -0.4
VPS33B-208ENST00000574755 SULT2B1O00204 365 aa12.54□□□□□ -0.4
VPS33B-208ENST00000574755 CTDSPLO15194 276 aa12.54□□□□□ -0.4
VPS33B-208ENST00000574755 IGHEP01854 428 aa12.54□□□□□ -0.4
VPS33B-208ENST00000574755 IGHG1P01857 330 aa12.54□□□□□ -0.4
VPS33B-208ENST00000574755 HRGP04196 525 aa12.54□□□□□ -0.4
VPS33B-208ENST00000574755 CD63P08962 238 aa12.54□□□□□ -0.4
VPS33B-208ENST00000574755 ZNF43P17038 809 aa12.54□□□□□ -0.4
VPS33B-208ENST00000574755 AGFG1P52594 562 aaKnown RBP12.54□□□□□ -0.4
VPS33B-208ENST00000574755 MLF1P58340 268 aa12.54□□□□□ -0.4
VPS33B-208ENST00000574755 ANGPT1Q15389 498 aa12.54□□□□□ -0.4
VPS33B-208ENST00000574755 THEM4Q5T1C6 240 aa12.54□□□□□ -0.4
VPS33B-208ENST00000574755 STPG1Q5TH74 334 aa12.54□□□□□ -0.4
VPS33B-208ENST00000574755 UTS2BQ765I0 119 aa12.54□□□□□ -0.4
VPS33B-208ENST00000574755 RAB11FIP2Q7L804 512 aa12.54□□□□□ -0.4
VPS33B-208ENST00000574755 ZNF227Q86WZ6 799 aa12.54□□□□□ -0.4
VPS33B-208ENST00000574755 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.54□□□□□ -0.4
VPS33B-208ENST00000574755 OR1J4Q8NGS1 313 aa12.54□□□□□ -0.4
VPS33B-208ENST00000574755 SMIM4Q8WVI0 70 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms