RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 NPR2P20594 1047 aa5.8□□□□□ -1.48
CTDNEP1-204ENST00000570484 SLC2A5P22732 501 aa5.8□□□□□ -1.48
CTDNEP1-204ENST00000570484 LAP3P28838 519 aa5.8□□□□□ -1.48
CTDNEP1-204ENST00000570484 CHRNB4P30926 498 aa5.8□□□□□ -1.48
CTDNEP1-204ENST00000570484 ENTPD1P49961 510 aa5.8□□□□□ -1.48
CTDNEP1-204ENST00000570484 GABARAPL2P60520 117 aa5.8□□□□□ -1.48
CTDNEP1-204ENST00000570484 CXCR4P61073 352 aa5.8□□□□□ -1.48
CTDNEP1-204ENST00000570484 UBE2NP61088 152 aaKnown RBP5.8□□□□□ -1.48
CTDNEP1-204ENST00000570484 PCBD1P61457 104 aa5.8□□□□□ -1.48
CTDNEP1-204ENST00000570484 MRPS34P82930 218 aaKnown RBP5.8□□□□□ -1.48
CTDNEP1-204ENST00000570484 FOXF2Q12947 444 aa5.8□□□□□ -1.48
CTDNEP1-204ENST00000570484 GGTLC2Q14390 218 aa5.8□□□□□ -1.48
CTDNEP1-204ENST00000570484 IGFBP7Q16270 282 aa5.8□□□□□ -1.48
CTDNEP1-204ENST00000570484 SGCAQ16586 387 aa5.8□□□□□ -1.48
CTDNEP1-204ENST00000570484 SMN1Q16637 294 aaKnown RBP5.8□□□□□ -1.48
CTDNEP1-204ENST00000570484 HIST3H3Q16695 136 aa5.8□□□□□ -1.48
CTDNEP1-204ENST00000570484 SLC25A35Q3KQZ1 300 aa5.8□□□□□ -1.48
CTDNEP1-204ENST00000570484 SLC36A2Q495M3 483 aa5.8□□□□□ -1.48
CTDNEP1-204ENST00000570484 C6orf141Q5SZD1 244 aa5.8□□□□□ -1.48
CTDNEP1-204ENST00000570484 AADACL4Q5VUY2 407 aa5.8□□□□□ -1.48
CTDNEP1-204ENST00000570484 SEM1Q6ZVN7 128 aa5.8□□□□□ -1.48
CTDNEP1-204ENST00000570484 NCCRP1Q6ZVX7 275 aaPredicted RBP5.8□□□□□ -1.48
CTDNEP1-204ENST00000570484 SHFQ7M4L6 423 aa5.8□□□□□ -1.48
CTDNEP1-204ENST00000570484 FAM220AQ7Z4H9 259 aa5.8□□□□□ -1.48
CTDNEP1-204ENST00000570484 ZBTB46Q86UZ6 589 aa5.8□□□□□ -1.48
CTDNEP1-204ENST00000570484 WFDC8Q8IUA0 241 aa5.8□□□□□ -1.48
CTDNEP1-204ENST00000570484 OR6V1Q8N148 313 aa5.8□□□□□ -1.48
CTDNEP1-204ENST00000570484 OR10H4Q8NGA5 316 aa5.8□□□□□ -1.48
CTDNEP1-204ENST00000570484 CA5BP1Q8WTZ4 195 aa5.8□□□□□ -1.48
CTDNEP1-204ENST00000570484 IPCEF1Q8WWN9 437 aaPredicted RBP5.8□□□□□ -1.48
CTDNEP1-204ENST00000570484 KISS1RQ969F8 398 aaPredicted RBP5.8□□□□□ -1.48
CTDNEP1-204ENST00000570484 UBE2FQ969M7 185 aa5.8□□□□□ -1.48
CTDNEP1-204ENST00000570484 FOXN4Q96NZ1 517 aa5.8□□□□□ -1.48
CTDNEP1-204ENST00000570484 NR1H4Q96RI1 486 aaPredicted RBP5.8□□□□□ -1.48
CTDNEP1-204ENST00000570484 DMRTA2Q96SC8 542 aa5.8□□□□□ -1.48
CTDNEP1-204ENST00000570484 MNTQ99583 582 aa5.8□□□□□ -1.48
CTDNEP1-204ENST00000570484 COPS4Q9BT78 406 aa5.8□□□□□ -1.48
CTDNEP1-204ENST00000570484 NMNAT2Q9BZQ4 307 aa5.8□□□□□ -1.48
CTDNEP1-204ENST00000570484 CLEC4MQ9H2X3 399 aaPredicted RBP5.8□□□□□ -1.48
CTDNEP1-204ENST00000570484 NELFAQ9H3P2 528 aa5.8□□□□□ -1.48
CTDNEP1-204ENST00000570484 AMBNQ9NP70 447 aa5.8□□□□□ -1.48
CTDNEP1-204ENST00000570484 TMEM38BQ9NVV0 291 aa5.8□□□□□ -1.48
CTDNEP1-204ENST00000570484 CNOT2Q9NZN8 540 aaKnown RBP5.8□□□□□ -1.48
CTDNEP1-204ENST00000570484 AASSQ9UDR5 926 aa5.8□□□□□ -1.48
CTDNEP1-204ENST00000570484 Q9UFV3 132 aa5.8□□□□□ -1.48
CTDNEP1-204ENST00000570484 KCNG2Q9UJ96 466 aa5.8□□□□□ -1.48
CTDNEP1-204ENST00000570484 LAMP5Q9UJQ1 280 aa5.8□□□□□ -1.48
CTDNEP1-204ENST00000570484 B9D1Q9UPM9 204 aa5.8□□□□□ -1.48
CTDNEP1-204ENST00000570484 SLC5A6Q9Y289 635 aa5.8□□□□□ -1.48
CTDNEP1-204ENST00000570484 TMEM14AQ9Y6G1 99 aa5.8□□□□□ -1.48
CTDNEP1-204ENST00000570484 COMMD3-BMI1R4GMX3 469 aa5.8□□□□□ -1.48
CTDNEP1-204ENST00000570484 LOC400499M0QZD8 3231 aa5.8□□□□□ -1.48
CTDNEP1-204ENST00000570484 USP24Q9UPU5 2620 aa5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 IGKV1D-43A0A0B4J1Z2 117 aa5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 DAPL1A0PJW8 107 aa5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 CCDC182A6NF36 153 aa5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 C12orf71A8MTZ7 269 aa5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 PTGES3LE9PB15 166 aa5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 RPL36A-HNRNPH2H7BZ11 118 aa5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 DCTN6O00399 190 aa5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 RGS10O43665 173 aa5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 SELENOFO60613 162 aa5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 LYZL6O75951 148 aa5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 UBL3O95164 117 aa5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 APOL3O95236 402 aa5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 OR8G3PP0DMU2 310 aa5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 GAAP10253 952 aa5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 CRHBPP24387 322 aa5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 EDNRAP25101 427 aa5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 CDAP32320 146 aa5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 GSK3AP49840 483 aa5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 ASCL1P50553 236 aa5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 ACTA2P62736 377 aa5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 ACTG2P63267 376 aa5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 ARF1P84077 181 aaKnown RBP5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 EFNB1P98172 346 aa5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 HSF2Q03933 536 aa5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 SCRN3Q0VDG4 424 aa5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 AQP6Q13520 282 aa5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 EIF2B1Q14232 305 aaKnown RBP5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 P2RY6Q15077 328 aa5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 ETFDHQ16134 617 aa5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 NRN1LQ496H8 165 aa5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 KCTD21Q4G0X4 260 aa5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 SOWAHCQ53LP3 525 aaPredicted RBP5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 PHYHD1Q5SRE7 291 aa5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 ZNF362Q5T0B9 420 aaPredicted RBP5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 OR7E24Q6IFN5 339 aa5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 SLC18B1Q6NT16 456 aa5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 TMEM53Q6P2H8 277 aa5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 ANKRD16Q6P6B7 361 aa5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 SLC25A47Q6Q0C1 308 aa5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 NHLRC1Q6VVB1 395 aa5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 SLC16A14Q7RTX9 510 aa5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 SLC16A9Q7RTY1 509 aa5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 DPPA2Q7Z7J5 298 aa5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 CXorf67Q86X51 503 aaPredicted RBP5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 WDFY1Q8IWB7 410 aa5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 SLC35F2Q8IXU6 374 aa5.79□□□□□ -1.48
CTDNEP1-204ENST00000570484 LRRC18Q8N456 261 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms