RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 IGHA1P01876 353 aa13.57□□□□□ -0.24
HERPUD1-219ENST00000570273 HRGP04196 525 aa13.57□□□□□ -0.24
HERPUD1-219ENST00000570273 ADRA2AP08913 450 aa13.57□□□□□ -0.24
HERPUD1-219ENST00000570273 SMIM18P0DKX4 95 aa13.57□□□□□ -0.24
HERPUD1-219ENST00000570273 ATP6V1B1P15313 513 aa13.57□□□□□ -0.24
HERPUD1-219ENST00000570273 MSR1P21757 451 aa13.57□□□□□ -0.24
HERPUD1-219ENST00000570273 C21orf33P30042 268 aaPredicted RBP13.57□□□□□ -0.24
HERPUD1-219ENST00000570273 MVKQ03426 396 aa13.57□□□□□ -0.24
HERPUD1-219ENST00000570273 TLE1Q04724 770 aa13.57□□□□□ -0.24
HERPUD1-219ENST00000570273 ACBD7Q8N6N7 88 aa13.57□□□□□ -0.24
HERPUD1-219ENST00000570273 SIGLEC11Q96RL6 698 aa13.57□□□□□ -0.24
HERPUD1-219ENST00000570273 DMRTA2Q96SC8 542 aa13.57□□□□□ -0.24
HERPUD1-219ENST00000570273 FOXB1Q99853 325 aa13.57□□□□□ -0.24
HERPUD1-219ENST00000570273 YIPF3Q9GZM5 350 aa13.57□□□□□ -0.24
HERPUD1-219ENST00000570273 OPN3Q9H1Y3 402 aaPredicted RBP13.57□□□□□ -0.24
HERPUD1-219ENST00000570273 TMEM38BQ9NVV0 291 aa13.57□□□□□ -0.24
HERPUD1-219ENST00000570273 CHCHD3Q9NX63 227 aaKnown RBP13.57□□□□□ -0.24
HERPUD1-219ENST00000570273 Q9UFV3 132 aa13.57□□□□□ -0.24
HERPUD1-219ENST00000570273 MED12LQ86YW9 2145 aa13.57□□□□□ -0.24
HERPUD1-219ENST00000570273 DOCK7Q96N67 2140 aa13.57□□□□□ -0.24
HERPUD1-219ENST00000570273 ZGRF1Q86YA3 2104 aa13.57□□□□□ -0.24
HERPUD1-219ENST00000570273 ZNF99A8MXY4 864 aaPredicted RBP13.56□□□□□ -0.24
HERPUD1-219ENST00000570273 ZNF670-ZNF695F2Z2N8 137 aa13.56□□□□□ -0.24
HERPUD1-219ENST00000570273 J3QRE1 110 aa13.56□□□□□ -0.24
HERPUD1-219ENST00000570273 ZNF593O00488 134 aaPredicted RBP13.56□□□□□ -0.24
HERPUD1-219ENST00000570273 SCG5P05408 212 aa13.56□□□□□ -0.24
HERPUD1-219ENST00000570273 B4GALT1P15291 398 aa13.56□□□□□ -0.24
HERPUD1-219ENST00000570273 MPGP29372 298 aa13.56□□□□□ -0.24
HERPUD1-219ENST00000570273 OPRM1P35372 400 aa13.56□□□□□ -0.24
HERPUD1-219ENST00000570273 RPS27P42677 84 aaKnown RBP13.56□□□□□ -0.24
HERPUD1-219ENST00000570273 MRPS34P82930 218 aaKnown RBP13.56□□□□□ -0.24
HERPUD1-219ENST00000570273 ARF1P84077 181 aaKnown RBP13.56□□□□□ -0.24
HERPUD1-219ENST00000570273 ZNF813Q6ZN06 617 aa13.56□□□□□ -0.24
HERPUD1-219ENST00000570273 DPY19L4Q7Z388 723 aa13.56□□□□□ -0.24
HERPUD1-219ENST00000570273 ATCAYQ86WG3 371 aa13.56□□□□□ -0.24
HERPUD1-219ENST00000570273 CDC20BQ86Y33 519 aa13.56□□□□□ -0.24
HERPUD1-219ENST00000570273 SVOPQ8N4V2 548 aa13.56□□□□□ -0.24
HERPUD1-219ENST00000570273 GALNT11Q8NCW6 608 aa13.56□□□□□ -0.24
HERPUD1-219ENST00000570273 RND1Q92730 232 aa13.56□□□□□ -0.24
HERPUD1-219ENST00000570273 NABP1Q96AH0 204 aa13.56□□□□□ -0.24
HERPUD1-219ENST00000570273 MRPS26Q9BYN8 205 aaKnown RBP13.56□□□□□ -0.24
HERPUD1-219ENST00000570273 NELFAQ9H3P2 528 aa13.56□□□□□ -0.24
HERPUD1-219ENST00000570273 PLSCR4Q9NRQ2 329 aa13.56□□□□□ -0.24
HERPUD1-219ENST00000570273 INPP5EQ9NRR6 644 aa13.56□□□□□ -0.24
HERPUD1-219ENST00000570273 KCNG2Q9UJ96 466 aa13.56□□□□□ -0.24
HERPUD1-219ENST00000570273 DAPL1A0PJW8 107 aa13.56□□□□□ -0.24
HERPUD1-219ENST00000570273 CCL21O00585 134 aa13.56□□□□□ -0.24
HERPUD1-219ENST00000570273 MYL12BO14950 172 aa13.56□□□□□ -0.24
HERPUD1-219ENST00000570273 IL18BPO95998 194 aa13.56□□□□□ -0.24
HERPUD1-219ENST00000570273 CGAP01215 116 aa13.56□□□□□ -0.24
HERPUD1-219ENST00000570273 OR2T7P0C7T2 308 aa13.56□□□□□ -0.24
HERPUD1-219ENST00000570273 CD8BP10966 210 aa13.56□□□□□ -0.24
HERPUD1-219ENST00000570273 PSKH1P11801 424 aa13.56□□□□□ -0.24
HERPUD1-219ENST00000570273 NPR2P20594 1047 aa13.56□□□□□ -0.24
HERPUD1-219ENST00000570273 MAP2K4P45985 399 aa13.56□□□□□ -0.24
HERPUD1-219ENST00000570273 HCCSP53701 268 aa13.56□□□□□ -0.24
HERPUD1-219ENST00000570273 FOXG1P55316 489 aaPredicted RBP13.56□□□□□ -0.24
HERPUD1-219ENST00000570273 SH3BGRP55822 239 aaPredicted RBP13.56□□□□□ -0.24
HERPUD1-219ENST00000570273 KCNMB1Q16558 191 aa13.56□□□□□ -0.24
HERPUD1-219ENST00000570273 KLHL24Q6TFL4 600 aa13.56□□□□□ -0.24
HERPUD1-219ENST00000570273 Q6ZT83 130 aa13.56□□□□□ -0.24
HERPUD1-219ENST00000570273 LINC00346Q8IVM7 164 aa13.56□□□□□ -0.24
HERPUD1-219ENST00000570273 SPARTQ8N0X7 666 aa13.56□□□□□ -0.24
HERPUD1-219ENST00000570273 OR2T27Q8NH04 317 aa13.56□□□□□ -0.24
HERPUD1-219ENST00000570273 MNTQ99583 582 aa13.56□□□□□ -0.24
HERPUD1-219ENST00000570273 CDADC1Q9BWV3 514 aa13.56□□□□□ -0.24
HERPUD1-219ENST00000570273 JAM3Q9BX67 310 aa13.56□□□□□ -0.24
HERPUD1-219ENST00000570273 CDCA4Q9BXL8 241 aa13.56□□□□□ -0.24
HERPUD1-219ENST00000570273 TTTY10Q9BZA0 68 aa13.56□□□□□ -0.24
HERPUD1-219ENST00000570273 SCOCQ9UIL1 159 aa13.56□□□□□ -0.24
HERPUD1-219ENST00000570273 LAMP5Q9UJQ1 280 aa13.56□□□□□ -0.24
HERPUD1-219ENST00000570273 COPS3Q9UNS2 423 aa13.56□□□□□ -0.24
HERPUD1-219ENST00000570273 KLHDC2Q9Y2U9 406 aa13.56□□□□□ -0.24
HERPUD1-219ENST00000570273 A0A1W2PQL4 384 aaPredicted RBP13.55□□□□□ -0.24
HERPUD1-219ENST00000570273 EEF1E1-BLOC1S5C9J1V9 151 aa13.55□□□□□ -0.24
HERPUD1-219ENST00000570273 EEF1E1O43324 174 aaKnown RBP13.55□□□□□ -0.24
HERPUD1-219ENST00000570273 TMCC2O75069 709 aa13.55□□□□□ -0.24
HERPUD1-219ENST00000570273 CNOT4O95628 575 aaKnown RBP13.55□□□□□ -0.24
HERPUD1-219ENST00000570273 ITGA5P08648 1049 aa13.55□□□□□ -0.24
HERPUD1-219ENST00000570273 BMP5P22003 454 aa13.55□□□□□ -0.24
HERPUD1-219ENST00000570273 ETV1P50549 477 aa13.55□□□□□ -0.24
HERPUD1-219ENST00000570273 LSM6P62312 80 aaKnown RBP13.55□□□□□ -0.24
HERPUD1-219ENST00000570273 EIF2B1Q14232 305 aaKnown RBP13.55□□□□□ -0.24
HERPUD1-219ENST00000570273 IRF3Q14653 427 aa13.55□□□□□ -0.24
HERPUD1-219ENST00000570273 TEX30Q5JUR7 227 aa13.55□□□□□ -0.24
HERPUD1-219ENST00000570273 SLC18B1Q6NT16 456 aa13.55□□□□□ -0.24
HERPUD1-219ENST00000570273 LHFPL3Q86UP9 236 aa13.55□□□□□ -0.24
HERPUD1-219ENST00000570273 RFLNBQ8N5W9 214 aa13.55□□□□□ -0.24
HERPUD1-219ENST00000570273 ZNF454Q8N9F8 522 aa13.55□□□□□ -0.24
HERPUD1-219ENST00000570273 ZNF610Q8N9Z0 462 aa13.55□□□□□ -0.24
HERPUD1-219ENST00000570273 OTOSQ8NHW6 89 aa13.55□□□□□ -0.24
HERPUD1-219ENST00000570273 ZNF416Q9BWM5 594 aa13.55□□□□□ -0.24
HERPUD1-219ENST00000570273 PIGMQ9H3S5 423 aa13.55□□□□□ -0.24
HERPUD1-219ENST00000570273 SIAEQ9HAT2 523 aa13.55□□□□□ -0.24
HERPUD1-219ENST00000570273 VCX3AQ9NNX9 186 aa13.55□□□□□ -0.24
HERPUD1-219ENST00000570273 ERVK13-1Q9NX77 482 aa13.55□□□□□ -0.24
HERPUD1-219ENST00000570273 CLEC2DQ9UHP7 191 aa13.55□□□□□ -0.24
HERPUD1-219ENST00000570273 ERGIC3Q9Y282 383 aa13.55□□□□□ -0.24
HERPUD1-219ENST00000570273 TMEM14AQ9Y6G1 99 aa13.55□□□□□ -0.24
HERPUD1-219ENST00000570273 ARHGAP21Q5T5U3 1957 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms