RNA–Protein interactions for RNA: ENST00000569151.1

BBS4-216, Transcript of Bardet-Biedl syndrome 4, human

TSL 3

Gene BBS4, Length 272 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS4-216	ENST00000569151	MAGEB1	P43366	347 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	CDX1	P47902	265 aa	Predicted RBP	4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	SLC11A1	P49279	550 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	PPM1F	P49593	454 aa	Predicted RBP	4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	P2RY4	P51582	365 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	PDX1	P52945	283 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	SLC16A1	P53985	500 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	TAS2R60	P59551	318 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	SPCS3	P61009	180 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	RPS4X	P62701	263 aa	Known RBP	4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	CSNK1G2	P78368	415 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	FABP9	Q0Z7S8	132 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	FOXO1	Q12778	655 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	FHL1	Q13642	323 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	MELK	Q14680	651 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	FAM189A2	Q15884	450 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	ZNF124	Q15973	351 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	CCL15	Q16663	113 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	MST1L	Q2TV78	715 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	KLHL26	Q53HC5	615 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	OR2B11	Q5JQS5	317 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	FCRL6	Q6DN72	434 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	FAAP20	Q6NZ36	180 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	ABHD17C	Q6PCB6	329 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	PRSS54	Q6PEW0	395 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	PAPD4	Q6PIY7	484 aa	Known RBP	4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	BTNL8	Q6UX41	500 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	RSPO2	Q6UXX9	243 aa	Predicted RBP	4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	ZNF793	Q6ZN11	406 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	RFLNA	Q6ZTI6	216 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	SLC16A13	Q7RTY0	426 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	ADGRE4P	Q86SQ3	457 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	MRPL52	Q86TS9	123 aa	Known RBP	4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	TMEM151B	Q8IW70	566 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	C9orf40	Q8IXQ3	194 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	KDM8	Q8N371	416 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	LRRC25	Q8N386	305 aa	Predicted RBP	4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	ZNF433	Q8N7K0	673 aa	Predicted RBP	4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	FAM169B	Q8N8A8	192 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	NKAIN3	Q8N8D7	197 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	CDRT4	Q8N9R6	151 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	DTWD2	Q8NBA8	298 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	NPEPL1	Q8NDH3	523 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	OR56B1	Q8NGI3	324 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	OR13C2	Q8NGS9	318 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	OR2A12	Q8NGT7	310 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	ZNF461	Q8TAF7	563 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	BRI3BP	Q8WY22	251 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	RGP1	Q92546	391 aa	Predicted RBP	4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	GCDH	Q92947	438 aa	Predicted RBP	4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	SCAMP4	Q969E2	229 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	WBP2	Q969T9	261 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	SCGB3A2	Q96PL1	93 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	MICU1	Q9BPX6	476 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	PDCD1LG2	Q9BQ51	273 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	TINAGL1	Q9GZM7	467 aa	Predicted RBP	4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	LINC00597	Q9H2U6	94 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	UNKL	Q9H9P5	680 aa	Known RBP	4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	IL21R	Q9HBE5	538 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	MKKS	Q9NPJ1	570 aa	Predicted RBP	4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	CYTL1	Q9NRR1	136 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	TPSG1	Q9NRR2	321 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	POT1	Q9NUX5	634 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	PARPBP	Q9NWS1	579 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	C2orf42	Q9NWW7	574 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	GDE1	Q9NZC3	331 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	FBLN5	Q9UBX5	448 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	CACFD1	Q9UGQ2	172 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	TAC3	Q9UHF0	121 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	PCOLCE2	Q9UKZ9	415 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	ANAPC10	Q9UM13	185 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	ASF1A	Q9Y294	204 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	MEMO1	Q9Y316	297 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	STARD10	Q9Y365	291 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	FAM96B	Q9Y3D0	163 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	PCDHGA1	Q9Y5H4	931 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	ENTPD2	Q9Y5L3	495 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	FLVCR1	Q9Y5Y0	555 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	SLC22A7	Q9Y694	548 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	TRIP12	Q14669	1992 aa	Predicted RBP	4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	CKAP5	Q14008	2032 aa		4.16	□□□□□ -1.74
BBS4-216	ENST00000569151	NUP210L	Q5VU65	1888 aa		4.15	□□□□□ -1.74
BBS4-216	ENST00000569151	SPTBN5	Q9NRC6	3674 aa	Known RBP	4.15	□□□□□ -1.74
BBS4-216	ENST00000569151		A0A087WWC5	75 aa		4.15	□□□□□ -1.75
BBS4-216	ENST00000569151		A0A1W2PPV9	198 aa		4.15	□□□□□ -1.75
BBS4-216	ENST00000569151		A0A1W2PR48	441 aa		4.15	□□□□□ -1.75
BBS4-216	ENST00000569151	ZC3H12D	A2A288	527 aa	Known RBP	4.15	□□□□□ -1.75
BBS4-216	ENST00000569151	CXorf65	A6NEN9	183 aa		4.15	□□□□□ -1.75
BBS4-216	ENST00000569151	OR6C76	A6NM76	312 aa		4.15	□□□□□ -1.75
BBS4-216	ENST00000569151	OR4C45	A6NMZ5	311 aa		4.15	□□□□□ -1.75
BBS4-216	ENST00000569151	ZNF705E	A8MWA4	302 aa	Predicted RBP	4.15	□□□□□ -1.75
BBS4-216	ENST00000569151	SEC14L6	B5MCN3	397 aa		4.15	□□□□□ -1.75
BBS4-216	ENST00000569151	MKRN2OS	H3BPM6	223 aa		4.15	□□□□□ -1.75
BBS4-216	ENST00000569151	RTCA	O00442	366 aa	Known RBP	4.15	□□□□□ -1.75
BBS4-216	ENST00000569151	ADAM10	O14672	748 aa		4.15	□□□□□ -1.75
BBS4-216	ENST00000569151	SMAD7	O15105	426 aa	Known RBP	4.15	□□□□□ -1.75
BBS4-216	ENST00000569151	LDLRAD4	O15165	306 aa		4.15	□□□□□ -1.75
BBS4-216	ENST00000569151	MBTPS2	O43462	519 aa		4.15	□□□□□ -1.75
BBS4-216	ENST00000569151	FRS3	O43559	492 aa		4.15	□□□□□ -1.75
BBS4-216	ENST00000569151	BRINP1	O60477	761 aa		4.15	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms