RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 HIST1H2ABP04908 130 aa13.05□□□□□ -0.32
PALB2-205ENST00000567003 ASAH2BP0C7U1 165 aa13.05□□□□□ -0.32
PALB2-205ENST00000567003 ZNF12P17014 697 aa13.05□□□□□ -0.32
PALB2-205ENST00000567003 ERVK-25P63136 954 aa13.05□□□□□ -0.32
PALB2-205ENST00000567003 RPL18Q07020 188 aaKnown RBP13.05□□□□□ -0.32
PALB2-205ENST00000567003 SLC3A1Q07837 685 aa13.05□□□□□ -0.32
PALB2-205ENST00000567003 MBNL2Q5VZF2 373 aaKnown RBP13.05□□□□□ -0.32
PALB2-205ENST00000567003 HIST3H2AQ7L7L0 130 aa13.05□□□□□ -0.32
PALB2-205ENST00000567003 PTOV1Q86YD1 416 aa13.05□□□□□ -0.32
PALB2-205ENST00000567003 ADAMTS16Q8TE57 1224 aa13.05□□□□□ -0.32
PALB2-205ENST00000567003 NSMAFQ92636 917 aa13.05□□□□□ -0.32
PALB2-205ENST00000567003 HIST1H2ACQ93077 130 aa13.05□□□□□ -0.32
PALB2-205ENST00000567003 SPDL1Q96EA4 605 aa13.05□□□□□ -0.32
PALB2-205ENST00000567003 CPPED1Q9BRF8 314 aaPredicted RBP13.05□□□□□ -0.32
PALB2-205ENST00000567003 MRPL13Q9BYD1 178 aaKnown RBP13.05□□□□□ -0.32
PALB2-205ENST00000567003 POFUT1Q9H488 388 aa13.05□□□□□ -0.32
PALB2-205ENST00000567003 ZMAT3Q9HA38 289 aaKnown RBP13.05□□□□□ -0.32
PALB2-205ENST00000567003 ANGPT4Q9Y264 503 aa13.05□□□□□ -0.32
PALB2-205ENST00000567003 INSIG2Q9Y5U4 225 aa13.05□□□□□ -0.32
PALB2-205ENST00000567003 PPIAL4EA0A075B759 164 aa13.04□□□□□ -0.32
PALB2-205ENST00000567003 PPIAL4CA0A0B4J2A2 164 aa13.04□□□□□ -0.32
PALB2-205ENST00000567003 PPIAL4DF5H284 164 aa13.04□□□□□ -0.32
PALB2-205ENST00000567003 FMO6PO60774 539 aa13.04□□□□□ -0.32
PALB2-205ENST00000567003 PPIAL4FP0DN26 164 aa13.04□□□□□ -0.32
PALB2-205ENST00000567003 AQP2P41181 271 aa13.04□□□□□ -0.32
PALB2-205ENST00000567003 GDI2P50395 445 aaKnown RBP13.04□□□□□ -0.32
PALB2-205ENST00000567003 UGT2B15P54855 530 aa13.04□□□□□ -0.32
PALB2-205ENST00000567003 PCBP3P57721 371 aaKnown RBP13.04□□□□□ -0.32
PALB2-205ENST00000567003 STX1BP61266 288 aa13.04□□□□□ -0.32
PALB2-205ENST00000567003 PPP1CBP62140 327 aa13.04□□□□□ -0.32
PALB2-205ENST00000567003 IL13RA1P78552 427 aa13.04□□□□□ -0.32
PALB2-205ENST00000567003 TNFAIP6P98066 277 aaPredicted RBP13.04□□□□□ -0.32
PALB2-205ENST00000567003 PSG4Q00888 419 aa13.04□□□□□ -0.32
PALB2-205ENST00000567003 SELPLGQ14242 412 aa13.04□□□□□ -0.32
PALB2-205ENST00000567003 SGCAQ16586 387 aa13.04□□□□□ -0.32
PALB2-205ENST00000567003 C10orf128Q5T292 105 aa13.04□□□□□ -0.32
PALB2-205ENST00000567003 WDR93Q6P2C0 686 aa13.04□□□□□ -0.32
PALB2-205ENST00000567003 BLOC1S3Q6QNY0 202 aa13.04□□□□□ -0.32
PALB2-205ENST00000567003 MOSPD2Q8NHP6 518 aa13.04□□□□□ -0.32
PALB2-205ENST00000567003 PFN4Q8NHR9 129 aa13.04□□□□□ -0.32
PALB2-205ENST00000567003 SLC25A28Q96A46 364 aa13.04□□□□□ -0.32
PALB2-205ENST00000567003 SEPHS2Q99611 448 aa13.04□□□□□ -0.32
PALB2-205ENST00000567003 GPA33Q99795 319 aa13.04□□□□□ -0.32
PALB2-205ENST00000567003 WNT5BQ9H1J7 359 aa13.04□□□□□ -0.32
PALB2-205ENST00000567003 SIAEQ9HAT2 523 aa13.04□□□□□ -0.32
PALB2-205ENST00000567003 PATZ1Q9HBE1 687 aaKnown RBP13.04□□□□□ -0.32
PALB2-205ENST00000567003 MEPEQ9NQ76 525 aaPredicted RBP13.04□□□□□ -0.32
PALB2-205ENST00000567003 TMEM106BQ9NUM4 274 aa13.04□□□□□ -0.32
PALB2-205ENST00000567003 CCDC167Q9P0B6 97 aa13.04□□□□□ -0.32
PALB2-205ENST00000567003 EIF3KQ9UBQ5 218 aaKnown RBP13.04□□□□□ -0.32
PALB2-205ENST00000567003 USH1CQ9Y6N9 552 aa13.04□□□□□ -0.32
PALB2-205ENST00000567003 A0A1W2PRG6 482 aa13.03□□□□□ -0.32
PALB2-205ENST00000567003 C3orf80F5H4A9 247 aa13.03□□□□□ -0.32
PALB2-205ENST00000567003 ADH4P08319 380 aa13.03□□□□□ -0.32
PALB2-205ENST00000567003 ACADSP16219 412 aa13.03□□□□□ -0.32
PALB2-205ENST00000567003 GPX2P18283 190 aa13.03□□□□□ -0.32
PALB2-205ENST00000567003 PPIBP23284 216 aaKnown RBP13.03□□□□□ -0.32
PALB2-205ENST00000567003 PCGF2P35227 344 aa13.03□□□□□ -0.32
PALB2-205ENST00000567003 ZMYND11Q15326 602 aa13.03□□□□□ -0.32
PALB2-205ENST00000567003 NRN1LQ496H8 165 aa13.03□□□□□ -0.32
PALB2-205ENST00000567003 DMRTA1Q5VZB9 504 aa13.03□□□□□ -0.32
PALB2-205ENST00000567003 EPGNQ6UW88 154 aa13.03□□□□□ -0.32
PALB2-205ENST00000567003 CLDN22Q8N7P3 220 aa13.03□□□□□ -0.32
PALB2-205ENST00000567003 HDAC2Q92769 488 aaKnown RBP13.03□□□□□ -0.32
PALB2-205ENST00000567003 PRSS27Q9BQR3 290 aa13.03□□□□□ -0.32
PALB2-205ENST00000567003 MRI1Q9BV20 369 aa13.03□□□□□ -0.32
PALB2-205ENST00000567003 MS4A7Q9GZW8 240 aaPredicted RBP13.03□□□□□ -0.32
PALB2-205ENST00000567003 KCNN2Q9H2S1 579 aa13.03□□□□□ -0.32
PALB2-205ENST00000567003 KLHL21Q9UJP4 597 aa13.03□□□□□ -0.32
PALB2-205ENST00000567003 TRAPPC13A5PLN9 417 aa13.02□□□□□ -0.33
PALB2-205ENST00000567003 EVPLLA8MZ36 301 aa13.02□□□□□ -0.33
PALB2-205ENST00000567003 F5H0A9 414 aaPredicted RBP13.02□□□□□ -0.33
PALB2-205ENST00000567003 M0QX08 132 aa13.02□□□□□ -0.33
PALB2-205ENST00000567003 TIMM8AO60220 97 aaPredicted RBP13.02□□□□□ -0.33
PALB2-205ENST00000567003 CD55P08174 381 aa13.02□□□□□ -0.33
PALB2-205ENST00000567003 CD247P20963 164 aa13.02□□□□□ -0.33
PALB2-205ENST00000567003 CD80P33681 288 aa13.02□□□□□ -0.33
PALB2-205ENST00000567003 SLC6A9P48067 706 aa13.02□□□□□ -0.33
PALB2-205ENST00000567003 ZNF133P52736 654 aaPredicted RBP13.02□□□□□ -0.33
PALB2-205ENST00000567003 MRPS34P82930 218 aaKnown RBP13.02□□□□□ -0.33
PALB2-205ENST00000567003 SPATC1Q76KD6 591 aa13.02□□□□□ -0.33
PALB2-205ENST00000567003 PARP8Q8N3A8 854 aa13.02□□□□□ -0.33
PALB2-205ENST00000567003 SPICQ8N5J4 248 aa13.02□□□□□ -0.33
PALB2-205ENST00000567003 TMIGD2Q96BF3 282 aa13.02□□□□□ -0.33
PALB2-205ENST00000567003 NMD3Q96D46 503 aaKnown RBP13.02□□□□□ -0.33
PALB2-205ENST00000567003 EBF4Q9BQW3 602 aa13.02□□□□□ -0.33
PALB2-205ENST00000567003 ZNF426Q9BUY5 554 aa13.02□□□□□ -0.33
PALB2-205ENST00000567003 OR2H1Q9GZK4 316 aa13.02□□□□□ -0.33
PALB2-205ENST00000567003 EVA1AQ9H8M9 152 aa13.02□□□□□ -0.33
PALB2-205ENST00000567003 INIPQ9NRY2 104 aa13.02□□□□□ -0.33
PALB2-205ENST00000567003 CYSLTR2Q9NS75 346 aa13.02□□□□□ -0.33
PALB2-205ENST00000567003 POLR3KQ9Y2Y1 108 aaPredicted RBP13.02□□□□□ -0.33
PALB2-205ENST00000567003 A0A0G2JK05 382 aa13.01□□□□□ -0.33
PALB2-205ENST00000567003 POM121CA8CG34 1229 aa13.01□□□□□ -0.33
PALB2-205ENST00000567003 FUT1P19526 365 aa13.01□□□□□ -0.33
PALB2-205ENST00000567003 LAP3P28838 519 aa13.01□□□□□ -0.33
PALB2-205ENST00000567003 MRPL19P49406 292 aaKnown RBP13.01□□□□□ -0.33
PALB2-205ENST00000567003 DAP3P51398 398 aaKnown RBP13.01□□□□□ -0.33
PALB2-205ENST00000567003 MTPNP58546 118 aa13.01□□□□□ -0.33
PALB2-205ENST00000567003 BTG1P62324 171 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms