RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 OR4C15Q8NGM1 316 aa11.75□□□□□ -0.53
VPS9D1-204ENST00000565023 OR2T29Q8NH02 315 aa11.75□□□□□ -0.53
VPS9D1-204ENST00000565023 FOXN4Q96NZ1 517 aa11.75□□□□□ -0.53
VPS9D1-204ENST00000565023 TSPAN32Q96QS1 320 aa11.75□□□□□ -0.53
VPS9D1-204ENST00000565023 DOK1Q99704 481 aa11.75□□□□□ -0.53
VPS9D1-204ENST00000565023 GPA33Q99795 319 aa11.75□□□□□ -0.53
VPS9D1-204ENST00000565023 PIMREGQ9BSJ6 248 aa11.75□□□□□ -0.53
VPS9D1-204ENST00000565023 MRPL13Q9BYD1 178 aaKnown RBP11.75□□□□□ -0.53
VPS9D1-204ENST00000565023 KCNN2Q9H2S1 579 aa11.75□□□□□ -0.53
VPS9D1-204ENST00000565023 CCNB1IP1Q9NPC3 277 aa11.75□□□□□ -0.53
VPS9D1-204ENST00000565023 KRCC1Q9NPI7 259 aaPredicted RBP11.75□□□□□ -0.53
VPS9D1-204ENST00000565023 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.75□□□□□ -0.53
VPS9D1-204ENST00000565023 STX18Q9P2W9 335 aaKnown RBP11.75□□□□□ -0.53
VPS9D1-204ENST00000565023 DUSP13Q9UII6 198 aa11.75□□□□□ -0.53
VPS9D1-204ENST00000565023 TMCC3Q9ULS5 477 aa11.75□□□□□ -0.53
VPS9D1-204ENST00000565023 AURKCQ9UQB9 309 aa11.75□□□□□ -0.53
VPS9D1-204ENST00000565023 SIGLEC7Q9Y286 467 aa11.75□□□□□ -0.53
VPS9D1-204ENST00000565023 A0A096LNT2 108 aa11.74□□□□□ -0.53
VPS9D1-204ENST00000565023 CENPBD1B2RD01 187 aa11.74□□□□□ -0.53
VPS9D1-204ENST00000565023 LYNX1G3V0Z9 82 aa11.74□□□□□ -0.53
VPS9D1-204ENST00000565023 TNFRSF11BO00300 401 aa11.74□□□□□ -0.53
VPS9D1-204ENST00000565023 CD5LO43866 347 aa11.74□□□□□ -0.53
VPS9D1-204ENST00000565023 ENTPD5O75356 428 aa11.74□□□□□ -0.53
VPS9D1-204ENST00000565023 IGHMP01871 453 aa11.74□□□□□ -0.53
VPS9D1-204ENST00000565023 SERPINA5P05154 406 aa11.74□□□□□ -0.53
VPS9D1-204ENST00000565023 CSF3P09919 207 aa11.74□□□□□ -0.53
VPS9D1-204ENST00000565023 LYNX1P0DP58 116 aa11.74□□□□□ -0.53
VPS9D1-204ENST00000565023 ZNF26P17031 533 aaPredicted RBP11.74□□□□□ -0.53
VPS9D1-204ENST00000565023 IFNGR2P38484 337 aa11.74□□□□□ -0.53
VPS9D1-204ENST00000565023 ALDH3B1P43353 468 aa11.74□□□□□ -0.53
VPS9D1-204ENST00000565023 ERVS71-1P61550 626 aa11.74□□□□□ -0.53
VPS9D1-204ENST00000565023 PLP2Q04941 152 aa11.74□□□□□ -0.53
VPS9D1-204ENST00000565023 TAF11Q15544 211 aa11.74□□□□□ -0.53
VPS9D1-204ENST00000565023 HIST3H3Q16695 136 aa11.74□□□□□ -0.53
VPS9D1-204ENST00000565023 TMEM249Q2WGJ8 235 aa11.74□□□□□ -0.53
VPS9D1-204ENST00000565023 PAQR4Q8N4S7 273 aaPredicted RBP11.74□□□□□ -0.53
VPS9D1-204ENST00000565023 PAPD5Q8NDF8 572 aaKnown RBP11.74□□□□□ -0.53
VPS9D1-204ENST00000565023 MRPL24Q96A35 216 aaKnown RBP11.74□□□□□ -0.53
VPS9D1-204ENST00000565023 DENND2DQ9H6A0 471 aaPredicted RBP11.74□□□□□ -0.53
VPS9D1-204ENST00000565023 VNN3Q9NY84 501 aa11.74□□□□□ -0.53
VPS9D1-204ENST00000565023 MYEF2Q9P2K5 600 aaKnown RBP11.74□□□□□ -0.53
VPS9D1-204ENST00000565023 SONP18583 2426 aaKnown RBP11.74□□□□□ -0.53
VPS9D1-204ENST00000565023 IQCMA0A1B0GVH7 501 aa11.73□□□□□ -0.53
VPS9D1-204ENST00000565023 A0A1W2PPW3 197 aa11.73□□□□□ -0.53
VPS9D1-204ENST00000565023 OR10H3O60404 316 aa11.73□□□□□ -0.53
VPS9D1-204ENST00000565023 LCKP06239 509 aa11.73□□□□□ -0.53
VPS9D1-204ENST00000565023 ERCC1P07992 297 aaPredicted RBP11.73□□□□□ -0.53
VPS9D1-204ENST00000565023 DAOP14920 347 aa11.73□□□□□ -0.53
VPS9D1-204ENST00000565023 ZNF16P17020 682 aaPredicted RBP11.73□□□□□ -0.53
VPS9D1-204ENST00000565023 ZNF32P17041 273 aa11.73□□□□□ -0.53
VPS9D1-204ENST00000565023 USF1P22415 310 aaPredicted RBP11.73□□□□□ -0.53
VPS9D1-204ENST00000565023 FPR3P25089 353 aa11.73□□□□□ -0.53
VPS9D1-204ENST00000565023 APEX1P27695 318 aaKnown RBP11.73□□□□□ -0.53
VPS9D1-204ENST00000565023 APLNRP35414 380 aa11.73□□□□□ -0.53
VPS9D1-204ENST00000565023 GLRXP35754 106 aa11.73□□□□□ -0.53
VPS9D1-204ENST00000565023 GSSP48637 474 aa11.73□□□□□ -0.53
VPS9D1-204ENST00000565023 LOXL1Q08397 574 aaPredicted RBP11.73□□□□□ -0.53
VPS9D1-204ENST00000565023 GK3PQ14409 553 aa11.73□□□□□ -0.53
VPS9D1-204ENST00000565023 TBC1D28Q2M2D7 210 aa11.73□□□□□ -0.53
VPS9D1-204ENST00000565023 C10orf128Q5T292 105 aa11.73□□□□□ -0.53
VPS9D1-204ENST00000565023 ZNF770Q6IQ21 691 aaPredicted RBP11.73□□□□□ -0.53
VPS9D1-204ENST00000565023 RGS7BPQ6MZT1 257 aaPredicted RBP11.73□□□□□ -0.53
VPS9D1-204ENST00000565023 C1orf94Q6P1W5 598 aa11.73□□□□□ -0.53
VPS9D1-204ENST00000565023 SLC25A47Q6Q0C1 308 aa11.73□□□□□ -0.53
VPS9D1-204ENST00000565023 LINC00471Q8N535 108 aa11.73□□□□□ -0.53
VPS9D1-204ENST00000565023 AKR7LQ8NHP1 331 aa11.73□□□□□ -0.53
VPS9D1-204ENST00000565023 UTP4Q969X6 686 aaKnown RBP11.73□□□□□ -0.53
VPS9D1-204ENST00000565023 SLCO4A1Q96BD0 722 aa11.73□□□□□ -0.53
VPS9D1-204ENST00000565023 RSRC1Q96IZ7 334 aaKnown RBP11.73□□□□□ -0.53
VPS9D1-204ENST00000565023 RBP7Q96R05 134 aa11.73□□□□□ -0.53
VPS9D1-204ENST00000565023 KCNK17Q96T54 332 aa11.73□□□□□ -0.53
VPS9D1-204ENST00000565023 RERGLQ9H628 205 aa11.73□□□□□ -0.53
VPS9D1-204ENST00000565023 REEP1Q9H902 201 aa11.73□□□□□ -0.53
VPS9D1-204ENST00000565023 IL20RAQ9UHF4 553 aa11.73□□□□□ -0.53
VPS9D1-204ENST00000565023 FBXL3Q9UKT7 428 aa11.73□□□□□ -0.53
VPS9D1-204ENST00000565023 ADAM18Q9Y3Q7 739 aa11.73□□□□□ -0.53
VPS9D1-204ENST00000565023 SAMHD1Q9Y3Z3 626 aaKnown RBP11.73□□□□□ -0.53
VPS9D1-204ENST00000565023 ZANQ9Y493 2812 aa11.73□□□□□ -0.53
VPS9D1-204ENST00000565023 UGT2A1Q9Y4X1 527 aa11.73□□□□□ -0.53
VPS9D1-204ENST00000565023 UNC119BA6NIH7 251 aa11.72□□□□□ -0.53
VPS9D1-204ENST00000565023 M0R233 179 aa11.72□□□□□ -0.53
VPS9D1-204ENST00000565023 FKBP6O75344 327 aa11.72□□□□□ -0.53
VPS9D1-204ENST00000565023 NDUFB2O95178 105 aa11.72□□□□□ -0.53
VPS9D1-204ENST00000565023 CLPTM1O96005 669 aa11.72□□□□□ -0.53
VPS9D1-204ENST00000565023 CST1P01037 141 aa11.72□□□□□ -0.53
VPS9D1-204ENST00000565023 CD14P08571 375 aa11.72□□□□□ -0.53
VPS9D1-204ENST00000565023 NR2C1P13056 603 aa11.72□□□□□ -0.53
VPS9D1-204ENST00000565023 LAP3P28838 519 aa11.72□□□□□ -0.53
VPS9D1-204ENST00000565023 NR4A2P43354 598 aa11.72□□□□□ -0.53
VPS9D1-204ENST00000565023 FXYD6P3P58550 94 aa11.72□□□□□ -0.53
VPS9D1-204ENST00000565023 RPS23P62266 143 aaKnown RBP11.72□□□□□ -0.53
VPS9D1-204ENST00000565023 GLO1Q04760 184 aa11.72□□□□□ -0.53
VPS9D1-204ENST00000565023 PPP1R8Q12972 351 aaKnown RBP11.72□□□□□ -0.53
VPS9D1-204ENST00000565023 PABPC1L2AQ5JQF8 200 aa11.72□□□□□ -0.53
VPS9D1-204ENST00000565023 C1orf146Q5VVC0 180 aa11.72□□□□□ -0.53
VPS9D1-204ENST00000565023 OTPQ5XKR4 325 aa11.72□□□□□ -0.53
VPS9D1-204ENST00000565023 PGBD2Q6P3X8 592 aa11.72□□□□□ -0.53
VPS9D1-204ENST00000565023 PRIMA1Q86XR5 153 aa11.72□□□□□ -0.53
VPS9D1-204ENST00000565023 ZNF519Q8TB69 540 aa11.72□□□□□ -0.53
VPS9D1-204ENST00000565023 NEU4Q8WWR8 484 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms