RNA–Protein interactions for RNA: ENST00000564581.1

SUB1P3-201, Transcript of SUB1 homolog, transcriptional regulator pseudogene 3, humanhuman

BASIC

Gene SUB1P3, Length 315 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P3-201ENST00000564581 GTF2A1P52655 376 aaPredicted RBP1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 GBX2P52951 348 aaPredicted RBP1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 AP3M2P53677 418 aa1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 HADHBP55084 474 aaKnown RBP1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 ATP5IP56385 69 aaPredicted RBP1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 RWDD2BP57060 319 aa1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 UBE2IP63279 158 aaKnown RBP1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 TNNC1P63316 161 aa1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 TPM4P67936 248 aa1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 BASP1P80723 227 aaKnown RBP1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 BNIP1Q12981 228 aa1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 CUL1Q13616 776 aa1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 DPYSQ14117 519 aa1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 DOC2AQ14183 400 aa1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 NFE2L1Q14494 772 aa1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 RCN1Q15293 331 aa1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 TAF9Q16594 264 aa1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 HADHQ16836 314 aaKnown RBP1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 NKAIN1Q4KMZ8 207 aa1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 ZNF789Q5FWF6 425 aa1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 RABGAP1LQ5R372 815 aa1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 C1orf185Q5T7R7 199 aa1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 AGBL2Q5U5Z8 902 aa1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 KCTD16Q68DU8 428 aa1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 ADNP2Q6IQ32 1131 aa1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 C22orf39Q6P5X5 142 aa1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 ERICH5Q6P6B1 374 aa1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 CLEC2AQ6UVW9 174 aa1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 CWC27Q6UX04 472 aaKnown RBP1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 WASH2PQ6VEQ5 465 aa1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 MSANTD1Q6ZTZ1 278 aa1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 CYP4V2Q6ZWL3 525 aaPredicted RBP1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 CENPQQ7L2Z9 268 aaPredicted RBP1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 TAS2R42Q7RTR8 314 aa1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 SPATA19Q7Z5L4 167 aa1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 SETD3Q86TU7 594 aaPredicted RBP1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 TUSC5Q8IXB3 177 aa1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 FAM9CQ8IZT9 166 aa1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 BBS5Q8N3I7 341 aa1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 ZNF561Q8N587 486 aa1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 ATP6V0D2Q8N8Y2 350 aa1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 ZFP62Q8NB50 900 aaPredicted RBP1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 UXS1Q8NBZ7 420 aa1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 M1APQ8TC57 530 aa1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 SLC2A14Q8TDB8 520 aa1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 SRSF12Q8WXF0 261 aaKnown RBP1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 NCLNQ969V3 563 aa1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 NTAN1Q96AB6 310 aa1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 EFHD2Q96C19 240 aaPredicted RBP1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 LRRC39Q96DD0 335 aa1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 SLC25A38Q96DW6 304 aa1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 BTN2A3PQ96KV6 586 aa1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 C7orf34Q96L11 122 aa1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 FAM111AQ96PZ2 611 aa1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 OR2M4Q96R27 311 aa1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 RASL10BQ96S79 203 aa1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 SSX3Q99909 188 aa1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 CITED1Q99966 193 aa1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 B9D2Q9BPU9 175 aa1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 FERMT1Q9BQL6 677 aa1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 UTP23Q9BRU9 249 aaKnown RBP1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 SIKE1Q9BRV8 207 aa1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 SUCNR1Q9BXA5 334 aa1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 TBC1D10AQ9BXI6 508 aa1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 CHRNA10Q9GZZ6 450 aa1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 HAUS4Q9H6D7 363 aa1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 TRIM45Q9H8W5 580 aaPredicted RBP1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 Q9HAA7 133 aa1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 NTN4Q9HB63 628 aa1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 ZNF331Q9NQX6 463 aaPredicted RBP1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 GPR173Q9NS66 373 aa1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 HOMER3Q9NSC5 361 aa1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 DDX28Q9NUL7 540 aaKnown RBP1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 CHMP5Q9NZZ3 219 aa1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 EMC3Q9P0I2 261 aa1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 PDP1Q9P0J1 537 aaPredicted RBP1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 MBD2Q9UBB5 411 aa1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 FAM153AQ9UHL3 310 aa1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 ATPIF1Q9UII2 106 aa1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 LEF1Q9UJU2 399 aaPredicted RBP1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 GPR132Q9UNW8 380 aa1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 LIPT1Q9Y234 373 aa1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 PRELID1Q9Y255 219 aa1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 FAM215AQ9Y5M1 114 aa1.43□□□□□ -2.18
SUB1P3-201ENST00000564581 HECTD4Q9Y4D8 3996 aa1.42□□□□□ -2.18
SUB1P3-201ENST00000564581 DNAH9Q9NYC9 4486 aa1.42□□□□□ -2.18
SUB1P3-201ENST00000564581 NSG1A0A0A6YYJ2 146 aa1.42□□□□□ -2.18
SUB1P3-201ENST00000564581 TRAV34A0A0B4J273 112 aa1.42□□□□□ -2.18
SUB1P3-201ENST00000564581 SPRR5A0A1B0GTR4 108 aa1.42□□□□□ -2.18
SUB1P3-201ENST00000564581 A0A1W2PRV1 198 aa1.42□□□□□ -2.18
SUB1P3-201ENST00000564581 TSPAN11A1L157 253 aa1.42□□□□□ -2.18
SUB1P3-201ENST00000564581 HTR3EA5X5Y0 456 aa1.42□□□□□ -2.18
SUB1P3-201ENST00000564581 NCF1BA6NI72 391 aaPredicted RBP1.42□□□□□ -2.18
SUB1P3-201ENST00000564581 OR6C65A6NJZ3 312 aa1.42□□□□□ -2.18
SUB1P3-201ENST00000564581 VSTM2BA6NLU5 285 aa1.42□□□□□ -2.18
SUB1P3-201ENST00000564581 NCF1CA8MVU1 366 aaPredicted RBP1.42□□□□□ -2.18
SUB1P3-201ENST00000564581 HSBP1L1C9JCN9 74 aa1.42□□□□□ -2.18
SUB1P3-201ENST00000564581 ANKRD63C9JTQ0 380 aa1.42□□□□□ -2.18
SUB1P3-201ENST00000564581 NPIPA2E9PIF3 369 aa1.42□□□□□ -2.18
SUB1P3-201ENST00000564581 GOLGA6L19H0YKK7 550 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms