RNA–Protein interactions for RNA: ENST00000561517.5

CCDC113-203, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-203ENST00000561517 CDH20Q9HBT6 801 aa13.32□□□□□ -0.28
CCDC113-203ENST00000561517 MYOZ1Q9NP98 299 aaPredicted RBP13.32□□□□□ -0.28
CCDC113-203ENST00000561517 CCNB1IP1Q9NPC3 277 aa13.32□□□□□ -0.28
CCDC113-203ENST00000561517 TEX13CA0A0J9YWL9 993 aa13.31□□□□□ -0.28
CCDC113-203ENST00000561517 TCRBV5S2A0A599 114 aa13.31□□□□□ -0.28
CCDC113-203ENST00000561517 PRSS37A4D1T9 235 aa13.31□□□□□ -0.28
CCDC113-203ENST00000561517 VWC2LB2RUY7 222 aa13.31□□□□□ -0.28
CCDC113-203ENST00000561517 NDUFS8O00217 210 aa13.31□□□□□ -0.28
CCDC113-203ENST00000561517 XKRYO14609 159 aa13.31□□□□□ -0.28
CCDC113-203ENST00000561517 SYNGR3O43761 229 aa13.31□□□□□ -0.28
CCDC113-203ENST00000561517 TXNDC12O95881 172 aa13.31□□□□□ -0.28
CCDC113-203ENST00000561517 CCL2P13500 99 aa13.31□□□□□ -0.28
CCDC113-203ENST00000561517 APEHP13798 732 aaKnown RBP13.31□□□□□ -0.28
CCDC113-203ENST00000561517 APEX1P27695 318 aaKnown RBP13.31□□□□□ -0.28
CCDC113-203ENST00000561517 LAP3P28838 519 aa13.31□□□□□ -0.28
CCDC113-203ENST00000561517 PCSK6P29122 969 aa13.31□□□□□ -0.28
CCDC113-203ENST00000561517 RRM2P31350 389 aa13.31□□□□□ -0.28
CCDC113-203ENST00000561517 MAGEA2P43356 314 aa13.31□□□□□ -0.28
CCDC113-203ENST00000561517 PDLIM4P50479 330 aa13.31□□□□□ -0.28
CCDC113-203ENST00000561517 HMGA2P52926 109 aa13.31□□□□□ -0.28
CCDC113-203ENST00000561517 HSF2Q03933 536 aa13.31□□□□□ -0.28
CCDC113-203ENST00000561517 LOXL1Q08397 574 aaPredicted RBP13.31□□□□□ -0.28
CCDC113-203ENST00000561517 KRR1Q13601 381 aaKnown RBP13.31□□□□□ -0.28
CCDC113-203ENST00000561517 ENDOGQ14249 297 aaKnown RBP13.31□□□□□ -0.28
CCDC113-203ENST00000561517 TRIM25Q14258 630 aaKnown RBP13.31□□□□□ -0.28
CCDC113-203ENST00000561517 LCN8Q6JVE9 175 aa13.31□□□□□ -0.28
CCDC113-203ENST00000561517 DPY19L2P2Q6ZN68 376 aa13.31□□□□□ -0.28
CCDC113-203ENST00000561517 NEU4Q8WWR8 484 aaPredicted RBP13.31□□□□□ -0.28
CCDC113-203ENST00000561517 RASD2Q96D21 266 aa13.31□□□□□ -0.28
CCDC113-203ENST00000561517 C1orf21Q9H246 121 aa13.31□□□□□ -0.28
CCDC113-203ENST00000561517 LRMDAQ9H2I8 198 aa13.31□□□□□ -0.28
CCDC113-203ENST00000561517 DYNLRB1Q9NP97 96 aa13.31□□□□□ -0.28
CCDC113-203ENST00000561517 PRPF19Q9UMS4 504 aaKnown RBP13.31□□□□□ -0.28
CCDC113-203ENST00000561517 A0A1W2PPL8 197 aa13.3□□□□□ -0.28
CCDC113-203ENST00000561517 KRT36O76013 467 aa13.3□□□□□ -0.28
CCDC113-203ENST00000561517 SCG5P05408 212 aa13.3□□□□□ -0.28
CCDC113-203ENST00000561517 ADRA2AP08913 450 aa13.3□□□□□ -0.28
CCDC113-203ENST00000561517 MSR1P21757 451 aa13.3□□□□□ -0.28
CCDC113-203ENST00000561517 FPR3P25089 353 aa13.3□□□□□ -0.28
CCDC113-203ENST00000561517 APLNRP35414 380 aa13.3□□□□□ -0.28
CCDC113-203ENST00000561517 GUCA1AP43080 201 aaPredicted RBP13.3□□□□□ -0.28
CCDC113-203ENST00000561517 GSSP48637 474 aa13.3□□□□□ -0.28
CCDC113-203ENST00000561517 PCBD1P61457 104 aa13.3□□□□□ -0.28
CCDC113-203ENST00000561517 PSG4Q00888 419 aa13.3□□□□□ -0.28
CCDC113-203ENST00000561517 MS4A2Q01362 244 aa13.3□□□□□ -0.28
CCDC113-203ENST00000561517 RGS7BPQ6MZT1 257 aaPredicted RBP13.3□□□□□ -0.28
CCDC113-203ENST00000561517 C1orf94Q6P1W5 598 aa13.3□□□□□ -0.28
CCDC113-203ENST00000561517 SMARCD3Q6STE5 483 aa13.3□□□□□ -0.28
CCDC113-203ENST00000561517 SYT9Q86SS6 491 aa13.3□□□□□ -0.28
CCDC113-203ENST00000561517 ADCK1Q86TW2 530 aa13.3□□□□□ -0.28
CCDC113-203ENST00000561517 LRP11Q86VZ4 500 aa13.3□□□□□ -0.28
CCDC113-203ENST00000561517 ZCCHC24Q8N2G6 241 aaKnown RBP13.3□□□□□ -0.28
CCDC113-203ENST00000561517 POM121L2Q96KW2 1035 aa13.3□□□□□ -0.28
CCDC113-203ENST00000561517 SYT3Q9BQG1 590 aa13.3□□□□□ -0.28
CCDC113-203ENST00000561517 WACQ9BTA9 647 aa13.3□□□□□ -0.28
CCDC113-203ENST00000561517 ZNF416Q9BWM5 594 aa13.3□□□□□ -0.28
CCDC113-203ENST00000561517 OR2H1Q9GZK4 316 aa13.3□□□□□ -0.28
CCDC113-203ENST00000561517 WNT5BQ9H1J7 359 aa13.3□□□□□ -0.28
CCDC113-203ENST00000561517 POLE4Q9NR33 117 aa13.3□□□□□ -0.28
CCDC113-203ENST00000561517 TAS2R1Q9NYW7 299 aa13.3□□□□□ -0.28
CCDC113-203ENST00000561517 VSX1Q9NZR4 365 aaPredicted RBP13.3□□□□□ -0.28
CCDC113-203ENST00000561517 IL20RAQ9UHF4 553 aa13.3□□□□□ -0.28
CCDC113-203ENST00000561517 TIMM10BQ9Y5J6 103 aa13.3□□□□□ -0.28
CCDC113-203ENST00000561517 IER3IP1Q9Y5U9 82 aa13.3□□□□□ -0.28
CCDC113-203ENST00000561517 LOC100509620A0A075B734 347 aa13.29□□□□□ -0.28
CCDC113-203ENST00000561517 LOC390937A0A1W2PQ73 354 aa13.29□□□□□ -0.28
CCDC113-203ENST00000561517 M0R233 179 aa13.29□□□□□ -0.28
CCDC113-203ENST00000561517 CD5LO43866 347 aa13.29□□□□□ -0.28
CCDC113-203ENST00000561517 OR10H3O60404 316 aa13.29□□□□□ -0.28
CCDC113-203ENST00000561517 ERCC1P07992 297 aaPredicted RBP13.29□□□□□ -0.28
CCDC113-203ENST00000561517 FAM157BP0CG42 384 aa13.29□□□□□ -0.28
CCDC113-203ENST00000561517 ZNF250P15622 560 aa13.29□□□□□ -0.28
CCDC113-203ENST00000561517 CTLA4P16410 223 aa13.29□□□□□ -0.28
CCDC113-203ENST00000561517 STOMP27105 288 aa13.29□□□□□ -0.28
CCDC113-203ENST00000561517 IFNGR2P38484 337 aa13.29□□□□□ -0.28
CCDC113-203ENST00000561517 RAD52P43351 418 aa13.29□□□□□ -0.28
CCDC113-203ENST00000561517 RPS6KA3P51812 740 aa13.29□□□□□ -0.28
CCDC113-203ENST00000561517 UCP2P55851 309 aa13.29□□□□□ -0.28
CCDC113-203ENST00000561517 RFX4Q33E94 735 aa13.29□□□□□ -0.28
CCDC113-203ENST00000561517 PTCHD4Q6ZW05 846 aa13.29□□□□□ -0.28
CCDC113-203ENST00000561517 DHFR2Q86XF0 187 aa13.29□□□□□ -0.28
CCDC113-203ENST00000561517 AKR7LQ8NHP1 331 aa13.29□□□□□ -0.28
CCDC113-203ENST00000561517 POP5Q969H6 163 aaKnown RBP13.29□□□□□ -0.28
CCDC113-203ENST00000561517 BCL2L14Q9BZR8 327 aa13.29□□□□□ -0.28
CCDC113-203ENST00000561517 OR52D1Q9H346 318 aa13.29□□□□□ -0.28
CCDC113-203ENST00000561517 MS4A5Q9H3V2 200 aa13.29□□□□□ -0.28
CCDC113-203ENST00000561517 MAGIXQ9H6Y5 334 aa13.29□□□□□ -0.28
CCDC113-203ENST00000561517 MYEF2Q9P2K5 600 aaKnown RBP13.29□□□□□ -0.28
CCDC113-203ENST00000561517 REV1Q9UBZ9 1251 aa13.29□□□□□ -0.28
CCDC113-203ENST00000561517 TMCC3Q9ULS5 477 aa13.29□□□□□ -0.28
CCDC113-203ENST00000561517 LYVE1Q9Y5Y7 322 aa13.29□□□□□ -0.28
CCDC113-203ENST00000561517 IGLV3-9A0A075B6K5 115 aa13.28□□□□□ -0.28
CCDC113-203ENST00000561517 C12orf71A8MTZ7 269 aa13.28□□□□□ -0.28
CCDC113-203ENST00000561517 INAFM1C9JVW0 142 aa13.28□□□□□ -0.28
CCDC113-203ENST00000561517 SOCS2O14508 198 aa13.28□□□□□ -0.28
CCDC113-203ENST00000561517 IMPA2O14732 288 aa13.28□□□□□ -0.28
CCDC113-203ENST00000561517 ARPC3O15145 178 aa13.28□□□□□ -0.28
CCDC113-203ENST00000561517 SLC6A6P31641 620 aa13.28□□□□□ -0.28
CCDC113-203ENST00000561517 CDKN2AP42771 156 aaKnown RBP13.28□□□□□ -0.28
CCDC113-203ENST00000561517 TSPAN31Q12999 210 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms