RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 SLC30A7Q8NEW0 376 aa9.36□□□□□ -0.91
TPM1-229ENST00000561242 C11orf40Q8WZ69 217 aa9.36□□□□□ -0.91
TPM1-229ENST00000561242 CCL19Q99731 98 aa9.36□□□□□ -0.91
TPM1-229ENST00000561242 RACGAP1Q9H0H5 632 aa9.36□□□□□ -0.91
TPM1-229ENST00000561242 POLE4Q9NR33 117 aa9.36□□□□□ -0.91
TPM1-229ENST00000561242 CMC2Q9NRP2 79 aa9.36□□□□□ -0.91
TPM1-229ENST00000561242 CMAHPQ9Y471 501 aa9.36□□□□□ -0.91
TPM1-229ENST00000561242 GMPPBQ9Y5P6 360 aa9.36□□□□□ -0.91
TPM1-229ENST00000561242 NCKAP5O14513 1909 aa9.35□□□□□ -0.91
TPM1-229ENST00000561242 FAM171A2A8MVW0 826 aa9.35□□□□□ -0.91
TPM1-229ENST00000561242 BHLHE40O14503 412 aa9.35□□□□□ -0.91
TPM1-229ENST00000561242 TLX2O43763 284 aaPredicted RBP9.35□□□□□ -0.91
TPM1-229ENST00000561242 DOK2O60496 412 aa9.35□□□□□ -0.91
TPM1-229ENST00000561242 SMPD2O60906 423 aa9.35□□□□□ -0.91
TPM1-229ENST00000561242 RAF1P04049 648 aa9.35□□□□□ -0.91
TPM1-229ENST00000561242 HRGP04196 525 aa9.35□□□□□ -0.91
TPM1-229ENST00000561242 SPARCP09486 303 aa9.35□□□□□ -0.91
TPM1-229ENST00000561242 ANPEPP15144 967 aa9.35□□□□□ -0.91
TPM1-229ENST00000561242 FUT4P22083 530 aa9.35□□□□□ -0.91
TPM1-229ENST00000561242 STOMP27105 288 aa9.35□□□□□ -0.91
TPM1-229ENST00000561242 HSD11B1P28845 292 aa9.35□□□□□ -0.91
TPM1-229ENST00000561242 HTR5AP47898 357 aa9.35□□□□□ -0.91
TPM1-229ENST00000561242 FOXG1P55316 489 aaPredicted RBP9.35□□□□□ -0.91
TPM1-229ENST00000561242 SNRPD2P62316 118 aaKnown RBP9.35□□□□□ -0.91
TPM1-229ENST00000561242 MALLQ13021 153 aa9.35□□□□□ -0.91
TPM1-229ENST00000561242 MED21Q13503 144 aa9.35□□□□□ -0.91
TPM1-229ENST00000561242 CRMP1Q14194 572 aa9.35□□□□□ -0.91
TPM1-229ENST00000561242 LRRC36Q1X8D7 754 aa9.35□□□□□ -0.91
TPM1-229ENST00000561242 ZIK1Q3SY52 487 aaPredicted RBP9.35□□□□□ -0.91
TPM1-229ENST00000561242 PABPC1L2AQ5JQF8 200 aa9.35□□□□□ -0.91
TPM1-229ENST00000561242 SLC35D3Q5M8T2 416 aa9.35□□□□□ -0.91
TPM1-229ENST00000561242 TTC23Q5W5X9 447 aa9.35□□□□□ -0.91
TPM1-229ENST00000561242 PLBD1Q6P4A8 553 aa9.35□□□□□ -0.91
TPM1-229ENST00000561242 FAHD1Q6P587 224 aa9.35□□□□□ -0.91
TPM1-229ENST00000561242 TMEM154Q6P9G4 183 aa9.35□□□□□ -0.91
TPM1-229ENST00000561242 SEZ6L2Q6UXD5 910 aa9.35□□□□□ -0.91
TPM1-229ENST00000561242 ZNF627Q7L945 461 aa9.35□□□□□ -0.91
TPM1-229ENST00000561242 TMEM179BQ7Z7N9 219 aa9.35□□□□□ -0.91
TPM1-229ENST00000561242 IQCF1Q8N6M8 205 aa9.35□□□□□ -0.91
TPM1-229ENST00000561242 WDR31Q8NA23 367 aa9.35□□□□□ -0.91
TPM1-229ENST00000561242 OR9Q1Q8NGQ5 310 aa9.35□□□□□ -0.91
TPM1-229ENST00000561242 SNX33Q8WV41 574 aa9.35□□□□□ -0.91
TPM1-229ENST00000561242 BOD1Q96IK1 185 aa9.35□□□□□ -0.91
TPM1-229ENST00000561242 FOXN4Q96NZ1 517 aa9.35□□□□□ -0.91
TPM1-229ENST00000561242 INTS14Q96SY0 518 aa9.35□□□□□ -0.91
TPM1-229ENST00000561242 BCL2L14Q9BZR8 327 aa9.35□□□□□ -0.91
TPM1-229ENST00000561242 GABARAPL1Q9H0R8 117 aa9.35□□□□□ -0.91
TPM1-229ENST00000561242 FN3KQ9H479 309 aa9.35□□□□□ -0.91
TPM1-229ENST00000561242 NTN4Q9HB63 628 aa9.35□□□□□ -0.91
TPM1-229ENST00000561242 DYNLRB1Q9NP97 96 aa9.35□□□□□ -0.91
TPM1-229ENST00000561242 CENPMQ9NSP4 180 aa9.35□□□□□ -0.91
TPM1-229ENST00000561242 CLN6Q9NWW5 311 aa9.35□□□□□ -0.91
TPM1-229ENST00000561242 ITGB1BP2Q9UKP3 347 aa9.35□□□□□ -0.91
TPM1-229ENST00000561242 TMEM14AQ9Y6G1 99 aa9.35□□□□□ -0.91
TPM1-229ENST00000561242 ATMQ13315 3056 aa9.34□□□□□ -0.91
TPM1-229ENST00000561242 C5orf49A4QMS7 147 aa9.34□□□□□ -0.91
TPM1-229ENST00000561242 OR6C6A6NF89 314 aa9.34□□□□□ -0.91
TPM1-229ENST00000561242 SLC22A31A6NKX4 558 aa9.34□□□□□ -0.91
TPM1-229ENST00000561242 EI24O14681 340 aa9.34□□□□□ -0.91
TPM1-229ENST00000561242 HS3ST1O14792 307 aa9.34□□□□□ -0.91
TPM1-229ENST00000561242 RRP9O43818 475 aaKnown RBP9.34□□□□□ -0.91
TPM1-229ENST00000561242 GLCEO94923 617 aa9.34□□□□□ -0.91
TPM1-229ENST00000561242 THBDP07204 575 aa9.34□□□□□ -0.91
TPM1-229ENST00000561242 PATE4P0C8F1 98 aa9.34□□□□□ -0.91
TPM1-229ENST00000561242 CTLA4P16410 223 aa9.34□□□□□ -0.91
TPM1-229ENST00000561242 ZNF32P17041 273 aa9.34□□□□□ -0.91
TPM1-229ENST00000561242 APOBEC3AP31941 199 aaPredicted RBP9.34□□□□□ -0.91
TPM1-229ENST00000561242 CCKARP32238 428 aa9.34□□□□□ -0.91
TPM1-229ENST00000561242 PYCR1P32322 319 aa9.34□□□□□ -0.91
TPM1-229ENST00000561242 RGS6P49758 472 aa9.34□□□□□ -0.91
TPM1-229ENST00000561242 ENTPD1P49961 510 aa9.34□□□□□ -0.91
TPM1-229ENST00000561242 NUDT6P53370 316 aa9.34□□□□□ -0.91
TPM1-229ENST00000561242 TPTEP56180 551 aa9.34□□□□□ -0.91
TPM1-229ENST00000561242 CDK5Q00535 292 aa9.34□□□□□ -0.91
TPM1-229ENST00000561242 NAAAQ02083 359 aa9.34□□□□□ -0.91
TPM1-229ENST00000561242 POU4F2Q12837 409 aa9.34□□□□□ -0.91
TPM1-229ENST00000561242 ZNF672Q499Z4 452 aaPredicted RBP9.34□□□□□ -0.91
TPM1-229ENST00000561242 TMEM236Q5W0B7 351 aa9.34□□□□□ -0.91
TPM1-229ENST00000561242 KDM4DQ6B0I6 523 aa9.34□□□□□ -0.91
TPM1-229ENST00000561242 ZNF544Q6NX49 715 aa9.34□□□□□ -0.91
TPM1-229ENST00000561242 LINGO2Q7L985 606 aa9.34□□□□□ -0.91
TPM1-229ENST00000561242 ERI1Q8IV48 349 aaKnown RBP9.34□□□□□ -0.91
TPM1-229ENST00000561242 CPOQ8IVL8 374 aa9.34□□□□□ -0.91
TPM1-229ENST00000561242 OR6V1Q8N148 313 aa9.34□□□□□ -0.91
TPM1-229ENST00000561242 PACRGLQ8N7B6 248 aa9.34□□□□□ -0.91
TPM1-229ENST00000561242 TCEANCQ8N8B7 351 aa9.34□□□□□ -0.91
TPM1-229ENST00000561242 NPEPL1Q8NDH3 523 aa9.34□□□□□ -0.91
TPM1-229ENST00000561242 SETD9Q8NE22 299 aa9.34□□□□□ -0.91
TPM1-229ENST00000561242 OR6N2Q8NGY6 317 aa9.34□□□□□ -0.91
TPM1-229ENST00000561242 FAM81AQ8TBF8 368 aa9.34□□□□□ -0.91
TPM1-229ENST00000561242 SMAP2Q8WU79 429 aaPredicted RBP9.34□□□□□ -0.91
TPM1-229ENST00000561242 THEM6Q8WUY1 208 aa9.34□□□□□ -0.91
TPM1-229ENST00000561242 TRUB1Q8WWH5 349 aaKnown RBP9.34□□□□□ -0.91
TPM1-229ENST00000561242 CYGBQ8WWM9 190 aa9.34□□□□□ -0.91
TPM1-229ENST00000561242 ZNF837Q96EG3 531 aaPredicted RBP9.34□□□□□ -0.91
TPM1-229ENST00000561242 RDH12Q96NR8 316 aa9.34□□□□□ -0.91
TPM1-229ENST00000561242 DHRS9Q9BPW9 319 aa9.34□□□□□ -0.91
TPM1-229ENST00000561242 COPS4Q9BT78 406 aa9.34□□□□□ -0.91
TPM1-229ENST00000561242 ZNF416Q9BWM5 594 aa9.34□□□□□ -0.91
TPM1-229ENST00000561242 PLA2G12AQ9BZM1 189 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms