RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 UBA52P62987 128 aaKnown RBP7.78□□□□□ -1.16
HDDC3-204ENST00000559834 LCN2P80188 198 aa7.78□□□□□ -1.16
HDDC3-204ENST00000559834 TAF11Q15544 211 aa7.78□□□□□ -1.16
HDDC3-204ENST00000559834 FAM27BQ5VT28 67 aa7.78□□□□□ -1.16
HDDC3-204ENST00000559834 DHDDSQ86SQ9 333 aa7.78□□□□□ -1.16
HDDC3-204ENST00000559834 ZDHHC22Q8N966 263 aa7.78□□□□□ -1.16
HDDC3-204ENST00000559834 SLC25A40Q8TBP6 338 aa7.78□□□□□ -1.16
HDDC3-204ENST00000559834 KLF14Q8TD94 323 aaPredicted RBP7.78□□□□□ -1.16
HDDC3-204ENST00000559834 ASB10Q8WXI3 467 aa7.78□□□□□ -1.16
HDDC3-204ENST00000559834 POP5Q969H6 163 aaKnown RBP7.78□□□□□ -1.16
HDDC3-204ENST00000559834 SGTBQ96EQ0 304 aa7.78□□□□□ -1.16
HDDC3-204ENST00000559834 SH3GL1Q99961 368 aa7.78□□□□□ -1.16
HDDC3-204ENST00000559834 ZNF747Q9BV97 191 aa7.78□□□□□ -1.16
HDDC3-204ENST00000559834 POLR2J2Q9GZM3 115 aaKnown RBP7.78□□□□□ -1.16
HDDC3-204ENST00000559834 POLR2J3Q9H1A7 115 aaKnown RBP7.78□□□□□ -1.16
HDDC3-204ENST00000559834 KAT8Q9H7Z6 458 aaKnown RBP7.78□□□□□ -1.16
HDDC3-204ENST00000559834 MEPEQ9NQ76 525 aaPredicted RBP7.78□□□□□ -1.16
HDDC3-204ENST00000559834 TUBG2Q9NRH3 451 aa7.78□□□□□ -1.16
HDDC3-204ENST00000559834 UBAP1Q9NZ09 502 aa7.78□□□□□ -1.16
HDDC3-204ENST00000559834 BAG5Q9UL15 447 aa7.78□□□□□ -1.16
HDDC3-204ENST00000559834 SH3GLB1Q9Y371 365 aa7.78□□□□□ -1.16
HDDC3-204ENST00000559834 TIMM10BQ9Y5J6 103 aa7.78□□□□□ -1.16
HDDC3-204ENST00000559834 CACNG2Q9Y698 323 aa7.78□□□□□ -1.16
HDDC3-204ENST00000559834 LOC100509620A0A075B734 347 aa7.77□□□□□ -1.17
HDDC3-204ENST00000559834 NPIPB13A6NJU9 1138 aa7.77□□□□□ -1.17
HDDC3-204ENST00000559834 NPIPB4C9JG80 1138 aa7.77□□□□□ -1.17
HDDC3-204ENST00000559834 IFNA14P01570 189 aa7.77□□□□□ -1.17
HDDC3-204ENST00000559834 CD55P08174 381 aa7.77□□□□□ -1.17
HDDC3-204ENST00000559834 SBK2P0C263 348 aa7.77□□□□□ -1.17
HDDC3-204ENST00000559834 HKR1P10072 659 aa7.77□□□□□ -1.17
HDDC3-204ENST00000559834 TNFRSF1AP19438 455 aa7.77□□□□□ -1.17
HDDC3-204ENST00000559834 TNFSF4P23510 183 aa7.77□□□□□ -1.17
HDDC3-204ENST00000559834 CDAP32320 146 aa7.77□□□□□ -1.17
HDDC3-204ENST00000559834 IFNA8P32881 189 aa7.77□□□□□ -1.17
HDDC3-204ENST00000559834 PCGF2P35227 344 aa7.77□□□□□ -1.17
HDDC3-204ENST00000559834 MPV17P39210 176 aa7.77□□□□□ -1.17
HDDC3-204ENST00000559834 AQP2P41181 271 aa7.77□□□□□ -1.17
HDDC3-204ENST00000559834 MTPNP58546 118 aa7.77□□□□□ -1.17
HDDC3-204ENST00000559834 TAS2R41P59536 307 aa7.77□□□□□ -1.17
HDDC3-204ENST00000559834 PPP1CBP62140 327 aa7.77□□□□□ -1.17
HDDC3-204ENST00000559834 TNFAIP6P98066 277 aaPredicted RBP7.77□□□□□ -1.17
HDDC3-204ENST00000559834 PSG4Q00888 419 aa7.77□□□□□ -1.17
HDDC3-204ENST00000559834 CD47Q08722 323 aa7.77□□□□□ -1.17
HDDC3-204ENST00000559834 NFYCQ13952 458 aa7.77□□□□□ -1.17
HDDC3-204ENST00000559834 CYLC2Q14093 348 aaPredicted RBP7.77□□□□□ -1.17
HDDC3-204ENST00000559834 LAPTM4AQ15012 233 aa7.77□□□□□ -1.17
HDDC3-204ENST00000559834 VMACQ2NL98 169 aa7.77□□□□□ -1.17
HDDC3-204ENST00000559834 ARMCX4Q5H9R4 360 aa7.77□□□□□ -1.17
HDDC3-204ENST00000559834 MTX3Q5HYI7 312 aa7.77□□□□□ -1.17
HDDC3-204ENST00000559834 PRR31Q5SQ13 230 aa7.77□□□□□ -1.17
HDDC3-204ENST00000559834 SPATA46Q5T0L3 261 aa7.77□□□□□ -1.17
HDDC3-204ENST00000559834 ARMC4Q5T2S8 1044 aa7.77□□□□□ -1.17
HDDC3-204ENST00000559834 ZNF101Q8IZC7 436 aa7.77□□□□□ -1.17
HDDC3-204ENST00000559834 KLHL36Q8N4N3 616 aa7.77□□□□□ -1.17
HDDC3-204ENST00000559834 SPICQ8N5J4 248 aa7.77□□□□□ -1.17
HDDC3-204ENST00000559834 OR4D11Q8NGI4 311 aa7.77□□□□□ -1.17
HDDC3-204ENST00000559834 OR10A6Q8NH74 314 aa7.77□□□□□ -1.17
HDDC3-204ENST00000559834 ABHD4Q8TB40 342 aa7.77□□□□□ -1.17
HDDC3-204ENST00000559834 TMEM239Q8WW34 195 aa7.77□□□□□ -1.17
HDDC3-204ENST00000559834 DYDC1Q8WWB3 177 aa7.77□□□□□ -1.17
HDDC3-204ENST00000559834 LIPHQ8WWY8 451 aa7.77□□□□□ -1.17
HDDC3-204ENST00000559834 C22orf15Q8WYQ4 148 aa7.77□□□□□ -1.17
HDDC3-204ENST00000559834 NSMAFQ92636 917 aa7.77□□□□□ -1.17
HDDC3-204ENST00000559834 GTF3AQ92664 365 aaKnown RBP7.77□□□□□ -1.17
HDDC3-204ENST00000559834 TAMM41Q96BW9 452 aa7.77□□□□□ -1.17
HDDC3-204ENST00000559834 PRSS27Q9BQR3 290 aa7.77□□□□□ -1.17
HDDC3-204ENST00000559834 WACQ9BTA9 647 aa7.77□□□□□ -1.17
HDDC3-204ENST00000559834 OR2J1Q9GZK6 312 aa7.77□□□□□ -1.17
HDDC3-204ENST00000559834 TXNIPQ9H3M7 391 aa7.77□□□□□ -1.17
HDDC3-204ENST00000559834 ZNF696Q9H7X3 374 aa7.77□□□□□ -1.17
HDDC3-204ENST00000559834 ZMAT3Q9HA38 289 aaKnown RBP7.77□□□□□ -1.17
HDDC3-204ENST00000559834 OPN4Q9UHM6 478 aa7.77□□□□□ -1.17
HDDC3-204ENST00000559834 RIMS3Q9UJD0 308 aa7.77□□□□□ -1.17
HDDC3-204ENST00000559834 KLHL21Q9UJP4 597 aa7.77□□□□□ -1.17
HDDC3-204ENST00000559834 NUP50Q9UKX7 468 aa7.77□□□□□ -1.17
HDDC3-204ENST00000559834 MED31Q9Y3C7 131 aa7.77□□□□□ -1.17
HDDC3-204ENST00000559834 PPIAL4AQ9Y536 164 aa7.77□□□□□ -1.17
HDDC3-204ENST00000559834 PCDHGB1Q9Y5G3 927 aa7.77□□□□□ -1.17
HDDC3-204ENST00000559834 NPTNQ9Y639 398 aa7.77□□□□□ -1.17
HDDC3-204ENST00000559834 AUP1Q9Y679 476 aa7.77□□□□□ -1.17
HDDC3-204ENST00000559834 TMPRSS2O15393 492 aa7.76□□□□□ -1.17
HDDC3-204ENST00000559834 TIMM8AO60220 97 aaPredicted RBP7.76□□□□□ -1.17
HDDC3-204ENST00000559834 OR5F1O95221 314 aa7.76□□□□□ -1.17
HDDC3-204ENST00000559834 SLC2A10O95528 541 aa7.76□□□□□ -1.17
HDDC3-204ENST00000559834 FSHBP01225 129 aa7.76□□□□□ -1.17
HDDC3-204ENST00000559834 CST2P09228 141 aa7.76□□□□□ -1.17
HDDC3-204ENST00000559834 THRBP10828 461 aa7.76□□□□□ -1.17
HDDC3-204ENST00000559834 GSTM3P21266 225 aa7.76□□□□□ -1.17
HDDC3-204ENST00000559834 CPT2P23786 658 aa7.76□□□□□ -1.17
HDDC3-204ENST00000559834 PRTN3P24158 256 aa7.76□□□□□ -1.17
HDDC3-204ENST00000559834 WNT5AP41221 380 aa7.76□□□□□ -1.17
HDDC3-204ENST00000559834 ERVK-25P63136 954 aa7.76□□□□□ -1.17
HDDC3-204ENST00000559834 ZNF154Q13106 437 aa7.76□□□□□ -1.17
HDDC3-204ENST00000559834 SELPLGQ14242 412 aa7.76□□□□□ -1.17
HDDC3-204ENST00000559834 AGBL2Q5U5Z8 902 aa7.76□□□□□ -1.17
HDDC3-204ENST00000559834 FAM205BPQ63HN1 556 aa7.76□□□□□ -1.17
HDDC3-204ENST00000559834 SLC25A47Q6Q0C1 308 aa7.76□□□□□ -1.17
HDDC3-204ENST00000559834 CCDC80Q76M96 950 aa7.76□□□□□ -1.17
HDDC3-204ENST00000559834 ZNF771Q7L3S4 317 aaPredicted RBP7.76□□□□□ -1.17
HDDC3-204ENST00000559834 DOK3Q7L591 496 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms