RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 NAT10Q9H0A0 1025 aaKnown RBP3.89□□□□□ -1.79
MTHFD1-216ENST00000557539 AMBNQ9NP70 447 aa3.89□□□□□ -1.79
MTHFD1-216ENST00000557539 TIGARQ9NQ88 270 aa3.89□□□□□ -1.79
MTHFD1-216ENST00000557539 MRPL22Q9NWU5 206 aaKnown RBP3.89□□□□□ -1.79
MTHFD1-216ENST00000557539 NYAP2Q9P242 653 aa3.89□□□□□ -1.79
MTHFD1-216ENST00000557539 TBC1D24Q9ULP9 559 aa3.89□□□□□ -1.79
MTHFD1-216ENST00000557539 ERVW-1Q9UQF0 538 aa3.89□□□□□ -1.79
MTHFD1-216ENST00000557539 MYO7BQ6PIF6 2116 aa3.89□□□□□ -1.79
MTHFD1-216ENST00000557539 A0A1B0GTH9 108 aa3.88□□□□□ -1.79
MTHFD1-216ENST00000557539 A0A1B0GUS0 222 aa3.88□□□□□ -1.79
MTHFD1-216ENST00000557539 TCRBV9S1A1TA0A576 114 aa3.88□□□□□ -1.79
MTHFD1-216ENST00000557539 A8MXK9 166 aa3.88□□□□□ -1.79
MTHFD1-216ENST00000557539 E7ESA3 106 aa3.88□□□□□ -1.79
MTHFD1-216ENST00000557539 E9PLD3 99 aa3.88□□□□□ -1.79
MTHFD1-216ENST00000557539 G3V3Y1 287 aa3.88□□□□□ -1.79
MTHFD1-216ENST00000557539 CLOCKO15516 846 aa3.88□□□□□ -1.79
MTHFD1-216ENST00000557539 ZNF432O94892 652 aa3.88□□□□□ -1.79
MTHFD1-216ENST00000557539 OXSR1O95747 527 aaPredicted RBP3.88□□□□□ -1.79
MTHFD1-216ENST00000557539 GNA14O95837 355 aa3.88□□□□□ -1.79
MTHFD1-216ENST00000557539 ZNF24P17028 368 aa3.88□□□□□ -1.79
MTHFD1-216ENST00000557539 KITLGP21583 273 aa3.88□□□□□ -1.79
MTHFD1-216ENST00000557539 ATP5C1P36542 298 aaKnown RBP3.88□□□□□ -1.79
MTHFD1-216ENST00000557539 CDKN1BP46527 198 aa3.88□□□□□ -1.79
MTHFD1-216ENST00000557539 ALDH3B2P48448 385 aa3.88□□□□□ -1.79
MTHFD1-216ENST00000557539 RAB9AP51151 201 aa3.88□□□□□ -1.79
MTHFD1-216ENST00000557539 CLDN8P56748 225 aa3.88□□□□□ -1.79
MTHFD1-216ENST00000557539 KCNJ2P63252 427 aa3.88□□□□□ -1.79
MTHFD1-216ENST00000557539 SYCP1Q15431 976 aa3.88□□□□□ -1.79
MTHFD1-216ENST00000557539 DUSP7Q16829 419 aa3.88□□□□□ -1.79
MTHFD1-216ENST00000557539 KLHL40Q2TBA0 621 aa3.88□□□□□ -1.79
MTHFD1-216ENST00000557539 DEFB113Q30KQ7 82 aa3.88□□□□□ -1.79
MTHFD1-216ENST00000557539 CHRFAM7AQ494W8 412 aa3.88□□□□□ -1.79
MTHFD1-216ENST00000557539 HIKESHIQ53FT3 197 aa3.88□□□□□ -1.79
MTHFD1-216ENST00000557539 C16orf87Q6PH81 154 aa3.88□□□□□ -1.79
MTHFD1-216ENST00000557539 LRRC74BQ6ZQY2 392 aa3.88□□□□□ -1.79
MTHFD1-216ENST00000557539 LRRTM1Q86UE6 522 aa3.88□□□□□ -1.79
MTHFD1-216ENST00000557539 KLHDC8BQ8IXV7 354 aa3.88□□□□□ -1.79
MTHFD1-216ENST00000557539 C3orf56Q8N813 242 aa3.88□□□□□ -1.79
MTHFD1-216ENST00000557539 ST6GALNAC3Q8NDV1 305 aa3.88□□□□□ -1.79
MTHFD1-216ENST00000557539 OR7G2Q8NG99 324 aa3.88□□□□□ -1.79
MTHFD1-216ENST00000557539 OR4F6Q8NGB9 312 aa3.88□□□□□ -1.79
MTHFD1-216ENST00000557539 OR4Q3Q8NH05 313 aa3.88□□□□□ -1.79
MTHFD1-216ENST00000557539 TCTEX1D2Q8WW35 142 aa3.88□□□□□ -1.79
MTHFD1-216ENST00000557539 MRPS31Q92665 395 aaKnown RBP3.88□□□□□ -1.79
MTHFD1-216ENST00000557539 KIAA1143Q96AT1 154 aaPredicted RBP3.88□□□□□ -1.79
MTHFD1-216ENST00000557539 PPP1R16AQ96I34 528 aa3.88□□□□□ -1.79
MTHFD1-216ENST00000557539 ART5Q96L15 291 aa3.88□□□□□ -1.79
MTHFD1-216ENST00000557539 MBOAT4Q96T53 435 aa3.88□□□□□ -1.79
MTHFD1-216ENST00000557539 LITAFQ99732 161 aa3.88□□□□□ -1.79
MTHFD1-216ENST00000557539 CHCHD5Q9BSY4 110 aa3.88□□□□□ -1.79
MTHFD1-216ENST00000557539 ILKAPQ9H0C8 392 aaPredicted RBP3.88□□□□□ -1.79
MTHFD1-216ENST00000557539 DNTTIP1Q9H147 329 aa3.88□□□□□ -1.79
MTHFD1-216ENST00000557539 SMYD3Q9H7B4 428 aa3.88□□□□□ -1.79
MTHFD1-216ENST00000557539 INPP5EQ9NRR6 644 aa3.88□□□□□ -1.79
MTHFD1-216ENST00000557539 NUDT15Q9NV35 164 aa3.88□□□□□ -1.79
MTHFD1-216ENST00000557539 WARS2Q9UGM6 360 aaKnown RBP3.88□□□□□ -1.79
MTHFD1-216ENST00000557539 COPS3Q9UNS2 423 aa3.88□□□□□ -1.79
MTHFD1-216ENST00000557539 SAMD4AQ9UPU9 718 aaKnown RBP3.88□□□□□ -1.79
MTHFD1-216ENST00000557539 MRPL11Q9Y3B7 192 aaKnown RBP3.88□□□□□ -1.79
MTHFD1-216ENST00000557539 L3MBTL1Q9Y468 752 aa3.88□□□□□ -1.79
MTHFD1-216ENST00000557539 TNRC6AQ8NDV7 1962 aaKnown RBP3.87□□□□□ -1.79
MTHFD1-216ENST00000557539 TRAV25A0A0B4J276 109 aa3.87□□□□□ -1.79
MTHFD1-216ENST00000557539 CCT8L1PA6NM43 557 aa3.87□□□□□ -1.79
MTHFD1-216ENST00000557539 IDSB3KWA1 339 aa3.87□□□□□ -1.79
MTHFD1-216ENST00000557539 SULT2B1O00204 365 aa3.87□□□□□ -1.79
MTHFD1-216ENST00000557539 PES1O00541 588 aaKnown RBP3.87□□□□□ -1.79
MTHFD1-216ENST00000557539 PSTPIP1O43586 416 aa3.87□□□□□ -1.79
MTHFD1-216ENST00000557539 SCRG1O75711 98 aa3.87□□□□□ -1.79
MTHFD1-216ENST00000557539 OR2J3O76001 311 aa3.87□□□□□ -1.79
MTHFD1-216ENST00000557539 NOL4O94818 638 aa3.87□□□□□ -1.79
MTHFD1-216ENST00000557539 SLITRK3O94933 977 aa3.87□□□□□ -1.79
MTHFD1-216ENST00000557539 S100A9P06702 114 aaKnown RBP3.87□□□□□ -1.79
MTHFD1-216ENST00000557539 ERCC1P07992 297 aaPredicted RBP3.87□□□□□ -1.79
MTHFD1-216ENST00000557539 CT62P0C5K7 136 aa3.87□□□□□ -1.79
MTHFD1-216ENST00000557539 OTX1P32242 354 aaPredicted RBP3.87□□□□□ -1.79
MTHFD1-216ENST00000557539 NAMPTP43490 491 aa3.87□□□□□ -1.79
MTHFD1-216ENST00000557539 PKNOX1P55347 436 aa3.87□□□□□ -1.79
MTHFD1-216ENST00000557539 TIMM10P62072 90 aa3.87□□□□□ -1.79
MTHFD1-216ENST00000557539 PDGFRLQ15198 375 aa3.87□□□□□ -1.79
MTHFD1-216ENST00000557539 ZNF77Q15935 545 aa3.87□□□□□ -1.79
MTHFD1-216ENST00000557539 MICAQ29983 383 aa3.87□□□□□ -1.79
MTHFD1-216ENST00000557539 GLYR1Q49A26 553 aaPredicted RBP3.87□□□□□ -1.79
MTHFD1-216ENST00000557539 VPS26BQ4G0F5 336 aa3.87□□□□□ -1.79
MTHFD1-216ENST00000557539 C9orf66Q5T8R8 295 aa3.87□□□□□ -1.79
MTHFD1-216ENST00000557539 AGBL2Q5U5Z8 902 aa3.87□□□□□ -1.79
MTHFD1-216ENST00000557539 AADACL4Q5VUY2 407 aa3.87□□□□□ -1.79
MTHFD1-216ENST00000557539 CCDC137Q6PK04 289 aaKnown RBP3.87□□□□□ -1.79
MTHFD1-216ENST00000557539 METTL7BQ6UX53 244 aa3.87□□□□□ -1.79
MTHFD1-216ENST00000557539 IQCKQ8N0W5 287 aa3.87□□□□□ -1.79
MTHFD1-216ENST00000557539 ACMSDQ8TDX5 336 aa3.87□□□□□ -1.79
MTHFD1-216ENST00000557539 NPRL2Q8WTW4 380 aa3.87□□□□□ -1.79
MTHFD1-216ENST00000557539 SLC45A3Q96JT2 553 aa3.87□□□□□ -1.79
MTHFD1-216ENST00000557539 ATF6BQ99941 703 aa3.87□□□□□ -1.79
MTHFD1-216ENST00000557539 TEKT3Q9BXF9 490 aa3.87□□□□□ -1.79
MTHFD1-216ENST00000557539 RBKSQ9H477 322 aa3.87□□□□□ -1.79
MTHFD1-216ENST00000557539 ZNF385DQ9H6B1 395 aa3.87□□□□□ -1.79
MTHFD1-216ENST00000557539 REEP4Q9H6H4 257 aa3.87□□□□□ -1.79
MTHFD1-216ENST00000557539 ZNF696Q9H7X3 374 aa3.87□□□□□ -1.79
MTHFD1-216ENST00000557539 JPT2Q9H910 190 aa3.87□□□□□ -1.79
MTHFD1-216ENST00000557539 CAB39LQ9H9S4 337 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms