RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 C11orf87Q6NUJ2 197 aa14.71□□□□□ -0.05
SHMT2-232ENST00000557487 JMJD6Q6NYC1 403 aaPredicted RBP14.71□□□□□ -0.05
SHMT2-232ENST00000557487 KCTD18Q6PI47 426 aaPredicted RBP14.71□□□□□ -0.05
SHMT2-232ENST00000557487 SHISA5Q8N114 240 aa14.71□□□□□ -0.05
SHMT2-232ENST00000557487 OR51A4Q8NGJ6 313 aa14.71□□□□□ -0.05
SHMT2-232ENST00000557487 SLC25A28Q96A46 364 aa14.71□□□□□ -0.05
SHMT2-232ENST00000557487 CHST6Q9GZX3 395 aa14.71□□□□□ -0.05
SHMT2-232ENST00000557487 ELOVL3Q9HB03 270 aa14.71□□□□□ -0.05
SHMT2-232ENST00000557487 TAS2R3Q9NYW6 316 aa14.71□□□□□ -0.05
SHMT2-232ENST00000557487 DHDHQ9UQ10 334 aa14.71□□□□□ -0.05
SHMT2-232ENST00000557487 A0A1B0GTH9 108 aa14.7□□□□□ -0.06
SHMT2-232ENST00000557487 DISC1C4P0D8 188 aa14.7□□□□□ -0.06
SHMT2-232ENST00000557487 SCDO00767 359 aa14.7□□□□□ -0.06
SHMT2-232ENST00000557487 XKRYO14609 159 aa14.7□□□□□ -0.06
SHMT2-232ENST00000557487 ZNF264O43296 627 aa14.7□□□□□ -0.06
SHMT2-232ENST00000557487 F13BP05160 661 aa14.7□□□□□ -0.06
SHMT2-232ENST00000557487 HTR2CP28335 458 aa14.7□□□□□ -0.06
SHMT2-232ENST00000557487 CD34P28906 385 aa14.7□□□□□ -0.06
SHMT2-232ENST00000557487 PGDP52209 483 aa14.7□□□□□ -0.06
SHMT2-232ENST00000557487 ALG11Q2TAA5 492 aa14.7□□□□□ -0.06
SHMT2-232ENST00000557487 TMEM196Q5HYL7 178 aa14.7□□□□□ -0.06
SHMT2-232ENST00000557487 PABPC1L2AQ5JQF8 200 aa14.7□□□□□ -0.06
SHMT2-232ENST00000557487 TMEM225Q6GV28 225 aa14.7□□□□□ -0.06
SHMT2-232ENST00000557487 ARMC6Q6NXE6 501 aa14.7□□□□□ -0.06
SHMT2-232ENST00000557487 ACOT7LQ6ZUV0 252 aa14.7□□□□□ -0.06
SHMT2-232ENST00000557487 ADGRE4PQ86SQ3 457 aa14.7□□□□□ -0.06
SHMT2-232ENST00000557487 ZNF615Q8N8J6 731 aa14.7□□□□□ -0.06
SHMT2-232ENST00000557487 OR8K3Q8NH51 312 aa14.7□□□□□ -0.06
SHMT2-232ENST00000557487 LRRC46Q96FV0 321 aa14.7□□□□□ -0.06
SHMT2-232ENST00000557487 SLC41A2Q96JW4 573 aa14.7□□□□□ -0.06
SHMT2-232ENST00000557487 PRRT1Q99946 306 aa14.7□□□□□ -0.06
SHMT2-232ENST00000557487 MRTO4Q9UKD2 239 aaKnown RBP14.7□□□□□ -0.06
SHMT2-232ENST00000557487 KCNK7Q9Y2U2 307 aa14.7□□□□□ -0.06
SHMT2-232ENST00000557487 PRELID3BQ9Y3B1 194 aa14.7□□□□□ -0.06
SHMT2-232ENST00000557487 COL6A3P12111 3177 aa14.7□□□□□ -0.06
SHMT2-232ENST00000557487 NUDT19A8MXV4 375 aa14.7□□□□□ -0.06
SHMT2-232ENST00000557487 ZNF736B4DX44 427 aaPredicted RBP14.7□□□□□ -0.06
SHMT2-232ENST00000557487 HRKO00198 91 aa14.7□□□□□ -0.06
SHMT2-232ENST00000557487 IL33O95760 270 aa14.7□□□□□ -0.06
SHMT2-232ENST00000557487 MST1P26927 711 aa14.7□□□□□ -0.06
SHMT2-232ENST00000557487 SEC13P55735 322 aa14.7□□□□□ -0.06
SHMT2-232ENST00000557487 HSD17B7P56937 341 aa14.7□□□□□ -0.06
SHMT2-232ENST00000557487 EGR4Q05215 589 aa14.7□□□□□ -0.06
SHMT2-232ENST00000557487 SERTAD2Q14140 314 aa14.7□□□□□ -0.06
SHMT2-232ENST00000557487 FAHD2BQ6P2I3 314 aaPredicted RBP14.7□□□□□ -0.06
SHMT2-232ENST00000557487 OR1J4Q8NGS1 313 aa14.7□□□□□ -0.06
SHMT2-232ENST00000557487 OR8S1Q8NH09 359 aa14.7□□□□□ -0.06
SHMT2-232ENST00000557487 GPBAR1Q8TDU6 330 aa14.7□□□□□ -0.06
SHMT2-232ENST00000557487 FAHD2AQ96GK7 314 aa14.7□□□□□ -0.06
SHMT2-232ENST00000557487 ADAM19Q9H013 955 aa14.7□□□□□ -0.06
SHMT2-232ENST00000557487 ZNF346Q9UL40 294 aaKnown RBP14.7□□□□□ -0.06
SHMT2-232ENST00000557487 PLEKHA6Q9Y2H5 1048 aa14.7□□□□□ -0.06
SHMT2-232ENST00000557487 OR14I1A6ND48 311 aa14.69□□□□□ -0.06
SHMT2-232ENST00000557487 C4orf47A7E2U8 309 aa14.69□□□□□ -0.06
SHMT2-232ENST00000557487 TGFBR3LH3BV60 316 aa14.69□□□□□ -0.06
SHMT2-232ENST00000557487 EIF1AYO14602 144 aaKnown RBP14.69□□□□□ -0.06
SHMT2-232ENST00000557487 MT-ATP6P00846 226 aa14.69□□□□□ -0.06
SHMT2-232ENST00000557487 AMY2AP04746 511 aa14.69□□□□□ -0.06
SHMT2-232ENST00000557487 GP1BAP07359 652 aa14.69□□□□□ -0.06
SHMT2-232ENST00000557487 IGFBP3P17936 291 aaPredicted RBP14.69□□□□□ -0.06
SHMT2-232ENST00000557487 RAB6AP20340 208 aa14.69□□□□□ -0.06
SHMT2-232ENST00000557487 TACR3P29371 465 aa14.69□□□□□ -0.06
SHMT2-232ENST00000557487 EIF1AXP47813 144 aaKnown RBP14.69□□□□□ -0.06
SHMT2-232ENST00000557487 MC2RQ01718 297 aa14.69□□□□□ -0.06
SHMT2-232ENST00000557487 MEP1BQ16820 701 aa14.69□□□□□ -0.06
SHMT2-232ENST00000557487 PAN3Q58A45 887 aaKnown RBP14.69□□□□□ -0.06
SHMT2-232ENST00000557487 PDSS1Q5T2R2 415 aa14.69□□□□□ -0.06
SHMT2-232ENST00000557487 ATPAF1Q5TC12 328 aaPredicted RBP14.69□□□□□ -0.06
SHMT2-232ENST00000557487 RAB12Q6IQ22 244 aa14.69□□□□□ -0.06
SHMT2-232ENST00000557487 BIVMQ86UB2 503 aa14.69□□□□□ -0.06
SHMT2-232ENST00000557487 ZDHHC22Q8N966 263 aa14.69□□□□□ -0.06
SHMT2-232ENST00000557487 PHOSPHO1Q8TCT1 267 aa14.69□□□□□ -0.06
SHMT2-232ENST00000557487 FOXRED1Q96CU9 486 aaPredicted RBP14.69□□□□□ -0.06
SHMT2-232ENST00000557487 NPAS1Q99742 590 aa14.69□□□□□ -0.06
SHMT2-232ENST00000557487 NKX6-2Q9C056 277 aaPredicted RBP14.69□□□□□ -0.06
SHMT2-232ENST00000557487 LAT2Q9GZY6 243 aa14.69□□□□□ -0.06
SHMT2-232ENST00000557487 SYT4Q9H2B2 425 aa14.69□□□□□ -0.06
SHMT2-232ENST00000557487 STARD5Q9NSY2 213 aa14.69□□□□□ -0.06
SHMT2-232ENST00000557487 PURGQ9UJV8 347 aaKnown RBP14.69□□□□□ -0.06
SHMT2-232ENST00000557487 TNFP01375 233 aa14.68□□□□□ -0.06
SHMT2-232ENST00000557487 H2AFB1P0C5Y9 115 aa14.68□□□□□ -0.06
SHMT2-232ENST00000557487 ZNF735P0CB33 412 aa14.68□□□□□ -0.06
SHMT2-232ENST00000557487 DHRS2Q13268 280 aa14.68□□□□□ -0.06
SHMT2-232ENST00000557487 MED25Q71SY5 747 aa14.68□□□□□ -0.06
SHMT2-232ENST00000557487 NDUFAF7Q7L592 441 aa14.68□□□□□ -0.06
SHMT2-232ENST00000557487 NKAIN3Q8N8D7 197 aa14.68□□□□□ -0.06
SHMT2-232ENST00000557487 DVL3Q92997 716 aaPredicted RBP14.68□□□□□ -0.06
SHMT2-232ENST00000557487 PMEPA1Q969W9 287 aa14.68□□□□□ -0.06
SHMT2-232ENST00000557487 PLA2G2FQ9BZM2 168 aa14.68□□□□□ -0.06
SHMT2-232ENST00000557487 ULBP3Q9BZM4 244 aa14.68□□□□□ -0.06
SHMT2-232ENST00000557487 TMEM185BQ9H7F4 350 aa14.68□□□□□ -0.06
SHMT2-232ENST00000557487 PRMT8Q9NR22 394 aaPredicted RBP14.68□□□□□ -0.06
SHMT2-232ENST00000557487 KCNG2Q9UJ96 466 aa14.68□□□□□ -0.06
SHMT2-232ENST00000557487 ZNF175Q9Y473 711 aa14.68□□□□□ -0.06
SHMT2-232ENST00000557487 KLF2Q9Y5W3 355 aaPredicted RBP14.68□□□□□ -0.06
SHMT2-232ENST00000557487 A0A0A6YYC8 382 aaPredicted RBP14.68□□□□□ -0.06
SHMT2-232ENST00000557487 H0Y8X5 98 aa14.68□□□□□ -0.06
SHMT2-232ENST00000557487 I3L1I5 382 aaPredicted RBP14.68□□□□□ -0.06
SHMT2-232ENST00000557487 LDLRAD4O15165 306 aa14.68□□□□□ -0.06
SHMT2-232ENST00000557487 MTRF1O75570 445 aaKnown RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms