RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 TMEM82A0PJX8 343 aa4.99□□□□□ -1.61
VPS33B-207ENST00000557470 AGAP5A6NIR3 686 aa4.99□□□□□ -1.61
VPS33B-207ENST00000557470 A8MVM7 634 aa4.99□□□□□ -1.61
VPS33B-207ENST00000557470 RPL36A-HNRNPH2H7BZ11 118 aa4.99□□□□□ -1.61
VPS33B-207ENST00000557470 HMGN4O00479 90 aa4.99□□□□□ -1.61
VPS33B-207ENST00000557470 RNASET2O00584 256 aaKnown RBP4.99□□□□□ -1.61
VPS33B-207ENST00000557470 CTDSP2O14595 271 aa4.99□□□□□ -1.61
VPS33B-207ENST00000557470 PLPP2O43688 288 aa4.99□□□□□ -1.61
VPS33B-207ENST00000557470 TRIM13O60858 407 aa4.99□□□□□ -1.61
VPS33B-207ENST00000557470 VAMP5O95183 116 aa4.99□□□□□ -1.61
VPS33B-207ENST00000557470 MPZL1O95297 269 aa4.99□□□□□ -1.61
VPS33B-207ENST00000557470 BCL10O95999 233 aa4.99□□□□□ -1.61
VPS33B-207ENST00000557470 HLA-HP01893 362 aa4.99□□□□□ -1.61
VPS33B-207ENST00000557470 C1QCP02747 245 aa4.99□□□□□ -1.61
VPS33B-207ENST00000557470 CHRM4P08173 479 aa4.99□□□□□ -1.61
VPS33B-207ENST00000557470 RPSAP08865 295 aaKnown RBP4.99□□□□□ -1.61
VPS33B-207ENST00000557470 GKN3PP0CG01 181 aa4.99□□□□□ -1.61
VPS33B-207ENST00000557470 HKR1P10072 659 aa4.99□□□□□ -1.61
VPS33B-207ENST00000557470 G6PDP11413 515 aa4.99□□□□□ -1.61
VPS33B-207ENST00000557470 SELLP14151 372 aa4.99□□□□□ -1.61
VPS33B-207ENST00000557470 RPS4Y1P22090 263 aaKnown RBP4.99□□□□□ -1.61
VPS33B-207ENST00000557470 CXCR1P25024 350 aa4.99□□□□□ -1.61
VPS33B-207ENST00000557470 MSX2P35548 267 aaPredicted RBP4.99□□□□□ -1.61
VPS33B-207ENST00000557470 EVX1P49640 407 aa4.99□□□□□ -1.61
VPS33B-207ENST00000557470 CLDN17P56750 224 aa4.99□□□□□ -1.61
VPS33B-207ENST00000557470 MRPS11P82912 194 aaKnown RBP4.99□□□□□ -1.61
VPS33B-207ENST00000557470 IFFO1Q0D2I5 559 aa4.99□□□□□ -1.61
VPS33B-207ENST00000557470 DBPQ10586 325 aaPredicted RBP4.99□□□□□ -1.61
VPS33B-207ENST00000557470 ZP4Q12836 540 aa4.99□□□□□ -1.61
VPS33B-207ENST00000557470 SYPL1Q16563 259 aa4.99□□□□□ -1.61
VPS33B-207ENST00000557470 CEACAM16Q2WEN9 425 aa4.99□□□□□ -1.61
VPS33B-207ENST00000557470 GPAT3Q53EU6 434 aa4.99□□□□□ -1.61
VPS33B-207ENST00000557470 MRPL2Q5T653 305 aaKnown RBP4.99□□□□□ -1.61
VPS33B-207ENST00000557470 AVPI1Q5T686 147 aa4.99□□□□□ -1.61
VPS33B-207ENST00000557470 C1orf140Q5VVS0 124 aa4.99□□□□□ -1.61
VPS33B-207ENST00000557470 SAXO2Q658L1 398 aa4.99□□□□□ -1.61
VPS33B-207ENST00000557470 REP15Q6BDI9 236 aa4.99□□□□□ -1.61
VPS33B-207ENST00000557470 ACSM5Q6NUN0 579 aa4.99□□□□□ -1.61
VPS33B-207ENST00000557470 TRMT10CQ7L0Y3 403 aaKnown RBP4.99□□□□□ -1.61
VPS33B-207ENST00000557470 ANKRD46Q86W74 232 aa4.99□□□□□ -1.61
VPS33B-207ENST00000557470 KDM8Q8N371 416 aa4.99□□□□□ -1.61
VPS33B-207ENST00000557470 ANKFN1Q8N957 763 aa4.99□□□□□ -1.61
VPS33B-207ENST00000557470 OR4M2Q8NGB6 313 aa4.99□□□□□ -1.61
VPS33B-207ENST00000557470 NANPQ8TBE9 248 aa4.99□□□□□ -1.61
VPS33B-207ENST00000557470 NEURL3Q96EH8 262 aa4.99□□□□□ -1.61
VPS33B-207ENST00000557470 DUX5Q96PT3 197 aa4.99□□□□□ -1.61
VPS33B-207ENST00000557470 TRNT1Q96Q11 434 aaKnown RBP4.99□□□□□ -1.61
VPS33B-207ENST00000557470 ZNF416Q9BWM5 594 aa4.99□□□□□ -1.61
VPS33B-207ENST00000557470 TAPBPLQ9BX59 468 aa4.99□□□□□ -1.61
VPS33B-207ENST00000557470 SLC38A1Q9H2H9 487 aa4.99□□□□□ -1.61
VPS33B-207ENST00000557470 ZNF665Q9H7R5 613 aa4.99□□□□□ -1.61
VPS33B-207ENST00000557470 PLEKHA2Q9HB19 425 aa4.99□□□□□ -1.61
VPS33B-207ENST00000557470 GPR35Q9HC97 309 aa4.99□□□□□ -1.61
VPS33B-207ENST00000557470 SLC52A3Q9NQ40 469 aa4.99□□□□□ -1.61
VPS33B-207ENST00000557470 TMEM140Q9NV12 185 aa4.99□□□□□ -1.61
VPS33B-207ENST00000557470 RLIMQ9NVW2 624 aa4.99□□□□□ -1.61
VPS33B-207ENST00000557470 B3GNT2Q9NY97 397 aa4.99□□□□□ -1.61
VPS33B-207ENST00000557470 IL19Q9UHD0 177 aa4.99□□□□□ -1.61
VPS33B-207ENST00000557470 BAG5Q9UL15 447 aa4.99□□□□□ -1.61
VPS33B-207ENST00000557470 RASD1Q9Y272 281 aa4.99□□□□□ -1.61
VPS33B-207ENST00000557470 ZNF99A8MXY4 864 aaPredicted RBP4.98□□□□□ -1.61
VPS33B-207ENST00000557470 FTCDNL1E5RQL4 147 aa4.98□□□□□ -1.61
VPS33B-207ENST00000557470 J3QLI3 93 aa4.98□□□□□ -1.61
VPS33B-207ENST00000557470 COPEO14579 308 aa4.98□□□□□ -1.61
VPS33B-207ENST00000557470 CDC14BO60729 498 aa4.98□□□□□ -1.61
VPS33B-207ENST00000557470 NPIPB7O75200 414 aa4.98□□□□□ -1.61
VPS33B-207ENST00000557470 ATP6V1G1O75348 118 aa4.98□□□□□ -1.61
VPS33B-207ENST00000557470 SLC43A1O75387 559 aa4.98□□□□□ -1.61
VPS33B-207ENST00000557470 PRSS23O95084 383 aa4.98□□□□□ -1.61
VPS33B-207ENST00000557470 LY86O95711 162 aa4.98□□□□□ -1.61
VPS33B-207ENST00000557470 MPIG6BO95866 241 aa4.98□□□□□ -1.61
VPS33B-207ENST00000557470 FSHBP01225 129 aa4.98□□□□□ -1.61
VPS33B-207ENST00000557470 TFPTP0C1Z6 253 aa4.98□□□□□ -1.61
VPS33B-207ENST00000557470 PNMTP11086 282 aa4.98□□□□□ -1.61
VPS33B-207ENST00000557470 CD79AP11912 226 aa4.98□□□□□ -1.61
VPS33B-207ENST00000557470 ZNF35P13682 527 aa4.98□□□□□ -1.61
VPS33B-207ENST00000557470 UQCRBP14927 111 aa4.98□□□□□ -1.61
VPS33B-207ENST00000557470 ANPEPP15144 967 aa4.98□□□□□ -1.61
VPS33B-207ENST00000557470 IL7RP16871 459 aa4.98□□□□□ -1.61
VPS33B-207ENST00000557470 FAHP16930 419 aa4.98□□□□□ -1.61
VPS33B-207ENST00000557470 ZNF14P17017 642 aaPredicted RBP4.98□□□□□ -1.61
VPS33B-207ENST00000557470 KRT4P19013 534 aa4.98□□□□□ -1.61
VPS33B-207ENST00000557470 UQCRC2P22695 453 aa4.98□□□□□ -1.61
VPS33B-207ENST00000557470 ZFP36P26651 326 aaKnown RBP4.98□□□□□ -1.61
VPS33B-207ENST00000557470 ALDH3A1P30838 453 aa4.98□□□□□ -1.61
VPS33B-207ENST00000557470 ARRB2P32121 409 aa4.98□□□□□ -1.61
VPS33B-207ENST00000557470 GLRXP35754 106 aa4.98□□□□□ -1.61
VPS33B-207ENST00000557470 CHI3L1P36222 383 aaPredicted RBP4.98□□□□□ -1.61
VPS33B-207ENST00000557470 ACAA2P42765 397 aaKnown RBP4.98□□□□□ -1.61
VPS33B-207ENST00000557470 MAGEB1P43366 347 aa4.98□□□□□ -1.61
VPS33B-207ENST00000557470 CLDN8P56748 225 aa4.98□□□□□ -1.61
VPS33B-207ENST00000557470 CCL8P80075 99 aa4.98□□□□□ -1.61
VPS33B-207ENST00000557470 MVKQ03426 396 aa4.98□□□□□ -1.61
VPS33B-207ENST00000557470 CHI3L2Q15782 390 aa4.98□□□□□ -1.61
VPS33B-207ENST00000557470 ZNF124Q15973 351 aa4.98□□□□□ -1.61
VPS33B-207ENST00000557470 GSTA3Q16772 222 aa4.98□□□□□ -1.61
VPS33B-207ENST00000557470 GSG1Q2KHT4 349 aa4.98□□□□□ -1.61
VPS33B-207ENST00000557470 ALKBH6Q3KRA9 238 aa4.98□□□□□ -1.61
VPS33B-207ENST00000557470 C19orf54Q5BKX5 351 aa4.98□□□□□ -1.61
VPS33B-207ENST00000557470 GKAP1Q5VSY0 366 aaPredicted RBP4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms