RNA–Protein interactions for RNA: ENST00000557433.5

SHMT2-231, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best)

Gene SHMT2, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-231ENST00000557433 ZNF735P0CB33 412 aa14.68□□□□□ -0.06
SHMT2-231ENST00000557433 DHRS2Q13268 280 aa14.68□□□□□ -0.06
SHMT2-231ENST00000557433 MED25Q71SY5 747 aa14.68□□□□□ -0.06
SHMT2-231ENST00000557433 NDUFAF7Q7L592 441 aa14.68□□□□□ -0.06
SHMT2-231ENST00000557433 NKAIN3Q8N8D7 197 aa14.68□□□□□ -0.06
SHMT2-231ENST00000557433 DVL3Q92997 716 aaPredicted RBP14.68□□□□□ -0.06
SHMT2-231ENST00000557433 PMEPA1Q969W9 287 aa14.68□□□□□ -0.06
SHMT2-231ENST00000557433 PLA2G2FQ9BZM2 168 aa14.68□□□□□ -0.06
SHMT2-231ENST00000557433 ULBP3Q9BZM4 244 aa14.68□□□□□ -0.06
SHMT2-231ENST00000557433 TMEM185BQ9H7F4 350 aa14.68□□□□□ -0.06
SHMT2-231ENST00000557433 PRMT8Q9NR22 394 aaPredicted RBP14.68□□□□□ -0.06
SHMT2-231ENST00000557433 WBP1LQ9NX94 342 aa14.68□□□□□ -0.06
SHMT2-231ENST00000557433 KCNG2Q9UJ96 466 aa14.68□□□□□ -0.06
SHMT2-231ENST00000557433 ZNF175Q9Y473 711 aa14.68□□□□□ -0.06
SHMT2-231ENST00000557433 KLF2Q9Y5W3 355 aaPredicted RBP14.68□□□□□ -0.06
SHMT2-231ENST00000557433 A0A0A6YYC8 382 aaPredicted RBP14.68□□□□□ -0.06
SHMT2-231ENST00000557433 A0A1W2PPC1 479 aa14.68□□□□□ -0.06
SHMT2-231ENST00000557433 H0Y8X5 98 aa14.68□□□□□ -0.06
SHMT2-231ENST00000557433 I3L1I5 382 aaPredicted RBP14.68□□□□□ -0.06
SHMT2-231ENST00000557433 LDLRAD4O15165 306 aa14.68□□□□□ -0.06
SHMT2-231ENST00000557433 MTRF1O75570 445 aaKnown RBP14.68□□□□□ -0.06
SHMT2-231ENST00000557433 NSA2O95478 260 aaKnown RBP14.68□□□□□ -0.06
SHMT2-231ENST00000557433 HOXB2P14652 356 aa14.68□□□□□ -0.06
SHMT2-231ENST00000557433 GDI1P31150 447 aa14.68□□□□□ -0.06
SHMT2-231ENST00000557433 AKT2P31751 481 aa14.68□□□□□ -0.06
SHMT2-231ENST00000557433 RORAP35398 523 aa14.68□□□□□ -0.06
SHMT2-231ENST00000557433 PBX2P40425 430 aa14.68□□□□□ -0.06
SHMT2-231ENST00000557433 CCR4P51679 360 aa14.68□□□□□ -0.06
SHMT2-231ENST00000557433 RIDAP52758 137 aaKnown RBP14.68□□□□□ -0.06
SHMT2-231ENST00000557433 CD226Q15762 336 aa14.68□□□□□ -0.06
SHMT2-231ENST00000557433 TMEM240Q5SV17 173 aa14.68□□□□□ -0.06
SHMT2-231ENST00000557433 TMED4Q7Z7H5 227 aa14.68□□□□□ -0.06
SHMT2-231ENST00000557433 SLC25A42Q86VD7 318 aa14.68□□□□□ -0.06
SHMT2-231ENST00000557433 BPIFB2Q8N4F0 458 aa14.68□□□□□ -0.06
SHMT2-231ENST00000557433 C19orf47Q8N9M1 422 aaKnown RBP14.68□□□□□ -0.06
SHMT2-231ENST00000557433 RELL2Q8NC24 303 aaPredicted RBP14.68□□□□□ -0.06
SHMT2-231ENST00000557433 MARC2Q969Z3 335 aa14.68□□□□□ -0.06
SHMT2-231ENST00000557433 ZBTB8AQ96BR9 441 aa14.68□□□□□ -0.06
SHMT2-231ENST00000557433 KTI12Q96EK9 354 aaPredicted RBP14.68□□□□□ -0.06
SHMT2-231ENST00000557433 VRK1Q99986 396 aaPredicted RBP14.68□□□□□ -0.06
SHMT2-231ENST00000557433 NDRG3Q9UGV2 375 aa14.68□□□□□ -0.06
SHMT2-231ENST00000557433 B9D1Q9UPM9 204 aa14.68□□□□□ -0.06
SHMT2-231ENST00000557433 CLDN16Q9Y5I7 305 aa14.68□□□□□ -0.06
SHMT2-231ENST00000557433 SCN2AQ99250 2005 aa14.68□□□□□ -0.06
SHMT2-231ENST00000557433 C2orf16Q68DN1 1984 aa14.67□□□□□ -0.06
SHMT2-231ENST00000557433 TRAV36DV7A0A075B6V5 113 aa14.67□□□□□ -0.06
SHMT2-231ENST00000557433 A0A1W2PQF6 199 aa14.67□□□□□ -0.06
SHMT2-231ENST00000557433 MEIS3P1A6NDR6 274 aa14.67□□□□□ -0.06
SHMT2-231ENST00000557433 H7C1C5 153 aa14.67□□□□□ -0.06
SHMT2-231ENST00000557433 SIGLEC6O43699 453 aa14.67□□□□□ -0.06
SHMT2-231ENST00000557433 SCGNO76038 276 aa14.67□□□□□ -0.06
SHMT2-231ENST00000557433 IL2RAP01589 272 aa14.67□□□□□ -0.06
SHMT2-231ENST00000557433 PPICP45877 212 aa14.67□□□□□ -0.06
SHMT2-231ENST00000557433 LCN6P62502 163 aa14.67□□□□□ -0.06
SHMT2-231ENST00000557433 DEFA5Q01523 94 aa14.67□□□□□ -0.06
SHMT2-231ENST00000557433 SNTB1Q13884 538 aaKnown RBP14.67□□□□□ -0.06
SHMT2-231ENST00000557433 NNATQ16517 81 aa14.67□□□□□ -0.06
SHMT2-231ENST00000557433 C1orf100Q5SVJ3 147 aa14.67□□□□□ -0.06
SHMT2-231ENST00000557433 ZNF627Q7L945 461 aa14.67□□□□□ -0.06
SHMT2-231ENST00000557433 MAMDC2Q7Z304 686 aaPredicted RBP14.67□□□□□ -0.06
SHMT2-231ENST00000557433 LYG2Q86SG7 212 aa14.67□□□□□ -0.06
SHMT2-231ENST00000557433 CATSPERDQ86XM0 798 aa14.67□□□□□ -0.06
SHMT2-231ENST00000557433 ZNF584Q8IVC4 421 aa14.67□□□□□ -0.06
SHMT2-231ENST00000557433 BPIFCQ8NFQ6 507 aa14.67□□□□□ -0.06
SHMT2-231ENST00000557433 OR1J2Q8NGS2 313 aa14.67□□□□□ -0.06
SHMT2-231ENST00000557433 ZNF563Q8TA94 476 aa14.67□□□□□ -0.06
SHMT2-231ENST00000557433 ASB5Q8WWX0 329 aa14.67□□□□□ -0.06
SHMT2-231ENST00000557433 PDCD10Q9BUL8 212 aa14.67□□□□□ -0.06
SHMT2-231ENST00000557433 SLC6A17Q9H1V8 727 aa14.67□□□□□ -0.06
SHMT2-231ENST00000557433 GAREM1Q9H706 876 aa14.67□□□□□ -0.06
SHMT2-231ENST00000557433 VSX1Q9NZR4 365 aaPredicted RBP14.67□□□□□ -0.06
SHMT2-231ENST00000557433 NOP16Q9Y3C1 178 aaKnown RBP14.67□□□□□ -0.06
SHMT2-231ENST00000557433 HS3ST3A1Q9Y663 406 aa14.67□□□□□ -0.06
SHMT2-231ENST00000557433 EML5Q05BV3 1969 aa14.67□□□□□ -0.06
SHMT2-231ENST00000557433 LOC390937A0A1W2PQ73 354 aa14.66□□□□□ -0.06
SHMT2-231ENST00000557433 PRSS37A4D1T9 235 aa14.66□□□□□ -0.06
SHMT2-231ENST00000557433 OR6A2O95222 327 aa14.66□□□□□ -0.06
SHMT2-231ENST00000557433 UTS2O95399 124 aa14.66□□□□□ -0.06
SHMT2-231ENST00000557433 BGLAPP02818 100 aa14.66□□□□□ -0.06
SHMT2-231ENST00000557433 PRKACAP17612 351 aa14.66□□□□□ -0.06
SHMT2-231ENST00000557433 ACHEP22303 614 aa14.66□□□□□ -0.06
SHMT2-231ENST00000557433 DLSTP36957 453 aa14.66□□□□□ -0.06
SHMT2-231ENST00000557433 LUMP51884 338 aaPredicted RBP14.66□□□□□ -0.06
SHMT2-231ENST00000557433 PMPCAQ10713 525 aa14.66□□□□□ -0.06
SHMT2-231ENST00000557433 MELKQ14680 651 aa14.66□□□□□ -0.06
SHMT2-231ENST00000557433 ELOCQ15369 112 aa14.66□□□□□ -0.06
SHMT2-231ENST00000557433 ATRAIDQ6UW56 229 aa14.66□□□□□ -0.06
SHMT2-231ENST00000557433 OR2W3Q7Z3T1 314 aa14.66□□□□□ -0.06
SHMT2-231ENST00000557433 LINC00518Q8N0U6 118 aa14.66□□□□□ -0.06
SHMT2-231ENST00000557433 GALNT16Q8N428 558 aa14.66□□□□□ -0.06
SHMT2-231ENST00000557433 METTL21AQ8WXB1 218 aa14.66□□□□□ -0.06
SHMT2-231ENST00000557433 TAAR8Q969N4 342 aa14.66□□□□□ -0.06
SHMT2-231ENST00000557433 AMELYQ99218 206 aa14.66□□□□□ -0.06
SHMT2-231ENST00000557433 TINAGL1Q9GZM7 467 aaPredicted RBP14.66□□□□□ -0.06
SHMT2-231ENST00000557433 MSRAQ9UJ68 235 aa14.66□□□□□ -0.06
SHMT2-231ENST00000557433 METTL21EPA6NDL7 271 aa14.66□□□□□ -0.06
SHMT2-231ENST00000557433 NUPL2O15504 423 aaKnown RBP14.66□□□□□ -0.06
SHMT2-231ENST00000557433 ATG12O94817 140 aa14.66□□□□□ -0.06
SHMT2-231ENST00000557433 HLA-AP01891 365 aaKnown RBP14.66□□□□□ -0.06
SHMT2-231ENST00000557433 HLA-DQA2P01906 255 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms