RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 THUMPD1Q9NXG2 353 aaKnown RBP10.47□□□□□ -0.73
PSEN1-221ENST00000557293 ASH2LQ9UBL3 628 aa10.47□□□□□ -0.73
PSEN1-221ENST00000557293 LGALS13Q9UHV8 139 aa10.47□□□□□ -0.73
PSEN1-221ENST00000557293 LRCH1Q9Y2L9 728 aa10.47□□□□□ -0.73
PSEN1-221ENST00000557293 UGT2A1Q9Y4X1 527 aa10.47□□□□□ -0.73
PSEN1-221ENST00000557293 IGKV1D-43A0A0B4J1Z2 117 aa10.46□□□□□ -0.73
PSEN1-221ENST00000557293 WDR91A4D1P6 747 aa10.46□□□□□ -0.73
PSEN1-221ENST00000557293 C5orf49A4QMS7 147 aa10.46□□□□□ -0.73
PSEN1-221ENST00000557293 TGDSO95455 350 aa10.46□□□□□ -0.73
PSEN1-221ENST00000557293 THY1P04216 161 aa10.46□□□□□ -0.73
PSEN1-221ENST00000557293 CDAP32320 146 aa10.46□□□□□ -0.73
PSEN1-221ENST00000557293 MDH2P40926 338 aaKnown RBP10.46□□□□□ -0.73
PSEN1-221ENST00000557293 PSG4Q00888 419 aa10.46□□□□□ -0.73
PSEN1-221ENST00000557293 HSF2Q03933 536 aa10.46□□□□□ -0.73
PSEN1-221ENST00000557293 MTX3Q5HYI7 312 aa10.46□□□□□ -0.73
PSEN1-221ENST00000557293 RUSC1-AS1Q66K80 236 aa10.46□□□□□ -0.73
PSEN1-221ENST00000557293 ZNF620Q6ZNG0 422 aa10.46□□□□□ -0.73
PSEN1-221ENST00000557293 FITM2Q8N6M3 262 aa10.46□□□□□ -0.73
PSEN1-221ENST00000557293 ITLN1Q8WWA0 313 aa10.46□□□□□ -0.73
PSEN1-221ENST00000557293 SSBP3Q9BWW4 388 aaPredicted RBP10.46□□□□□ -0.73
PSEN1-221ENST00000557293 PAIP1Q9H074 479 aaKnown RBP10.46□□□□□ -0.73
PSEN1-221ENST00000557293 WNT5BQ9H1J7 359 aa10.46□□□□□ -0.73
PSEN1-221ENST00000557293 POFUT1Q9H488 388 aa10.46□□□□□ -0.73
PSEN1-221ENST00000557293 SIAEQ9HAT2 523 aa10.46□□□□□ -0.73
PSEN1-221ENST00000557293 TMEM27Q9HBJ8 222 aa10.46□□□□□ -0.73
PSEN1-221ENST00000557293 TCF7L1Q9HCS4 588 aa10.46□□□□□ -0.73
PSEN1-221ENST00000557293 EIF3KQ9UBQ5 218 aaKnown RBP10.46□□□□□ -0.73
PSEN1-221ENST00000557293 CGGBP1Q9UFW8 167 aaPredicted RBP10.46□□□□□ -0.73
PSEN1-221ENST00000557293 H3BSA7 217 aa10.45□□□□□ -0.74
PSEN1-221ENST00000557293 TNFRSF13BO14836 293 aaPredicted RBP10.45□□□□□ -0.74
PSEN1-221ENST00000557293 GPR137BO60478 399 aa10.45□□□□□ -0.74
PSEN1-221ENST00000557293 ERLIN1O75477 346 aa10.45□□□□□ -0.74
PSEN1-221ENST00000557293 ZNF205O95201 554 aa10.45□□□□□ -0.74
PSEN1-221ENST00000557293 CH25HO95992 272 aa10.45□□□□□ -0.74
PSEN1-221ENST00000557293 IL6P05231 212 aa10.45□□□□□ -0.74
PSEN1-221ENST00000557293 CPT2P23786 658 aa10.45□□□□□ -0.74
PSEN1-221ENST00000557293 MRPS34P82930 218 aaKnown RBP10.45□□□□□ -0.74
PSEN1-221ENST00000557293 ZNF74Q16587 644 aa10.45□□□□□ -0.74
PSEN1-221ENST00000557293 C10orf128Q5T292 105 aa10.45□□□□□ -0.74
PSEN1-221ENST00000557293 BTNL3Q6UXE8 466 aa10.45□□□□□ -0.74
PSEN1-221ENST00000557293 KLBQ86Z14 1044 aa10.45□□□□□ -0.74
PSEN1-221ENST00000557293 ABHD4Q8TB40 342 aa10.45□□□□□ -0.74
PSEN1-221ENST00000557293 FAM71F1Q96KD3 344 aaPredicted RBP10.45□□□□□ -0.74
PSEN1-221ENST00000557293 ZNF607Q96SK3 696 aa10.45□□□□□ -0.74
PSEN1-221ENST00000557293 WDR55Q9H6Y2 383 aaPredicted RBP10.45□□□□□ -0.74
PSEN1-221ENST00000557293 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.45□□□□□ -0.74
PSEN1-221ENST00000557293 PPP1R3CQ9UQK1 317 aa10.45□□□□□ -0.74
PSEN1-221ENST00000557293 POMT1Q9Y6A1 747 aa10.45□□□□□ -0.74
PSEN1-221ENST00000557293 C5orf63A6NC05 138 aa10.44□□□□□ -0.74
PSEN1-221ENST00000557293 TMEM247A6NEH6 219 aa10.44□□□□□ -0.74
PSEN1-221ENST00000557293 C3orf80F5H4A9 247 aa10.44□□□□□ -0.74
PSEN1-221ENST00000557293 CLIC1O00299 241 aa10.44□□□□□ -0.74
PSEN1-221ENST00000557293 PIN1P1O15428 100 aa10.44□□□□□ -0.74
PSEN1-221ENST00000557293 PLXNB1O43157 2135 aa10.44□□□□□ -0.74
PSEN1-221ENST00000557293 RNF13O43567 381 aa10.44□□□□□ -0.74
PSEN1-221ENST00000557293 TRMUO75648 421 aaKnown RBP10.44□□□□□ -0.74
PSEN1-221ENST00000557293 ASAH2BP0C7U1 165 aa10.44□□□□□ -0.74
PSEN1-221ENST00000557293 TNFRSF1AP19438 455 aa10.44□□□□□ -0.74
PSEN1-221ENST00000557293 SLC1A6P48664 564 aa10.44□□□□□ -0.74
PSEN1-221ENST00000557293 GDI2P50395 445 aaKnown RBP10.44□□□□□ -0.74
PSEN1-221ENST00000557293 BPIFB3P59826 476 aa10.44□□□□□ -0.74
PSEN1-221ENST00000557293 RPL15P61313 204 aaKnown RBP10.44□□□□□ -0.74
PSEN1-221ENST00000557293 FGF12P61328 243 aa10.44□□□□□ -0.74
PSEN1-221ENST00000557293 PDCD1Q15116 288 aa10.44□□□□□ -0.74
PSEN1-221ENST00000557293 ZNF841Q6ZN19 808 aa10.44□□□□□ -0.74
PSEN1-221ENST00000557293 Q6ZSV7 163 aa10.44□□□□□ -0.74
PSEN1-221ENST00000557293 TSPYL5Q86VY4 417 aaPredicted RBP10.44□□□□□ -0.74
PSEN1-221ENST00000557293 C1orf174Q8IYL3 243 aa10.44□□□□□ -0.74
PSEN1-221ENST00000557293 EIF1ADQ8N9N8 165 aaKnown RBP10.44□□□□□ -0.74
PSEN1-221ENST00000557293 ZSCAN4Q8NAM6 433 aaPredicted RBP10.44□□□□□ -0.74
PSEN1-221ENST00000557293 HIPK4Q8NE63 616 aa10.44□□□□□ -0.74
PSEN1-221ENST00000557293 NFKBIDQ8NI38 313 aa10.44□□□□□ -0.74
PSEN1-221ENST00000557293 DYRK2Q92630 601 aa10.44□□□□□ -0.74
PSEN1-221ENST00000557293 GTF2H4Q92759 462 aa10.44□□□□□ -0.74
PSEN1-221ENST00000557293 THOC1Q96FV9 657 aaKnown RBP10.44□□□□□ -0.74
PSEN1-221ENST00000557293 NUDT16L1Q9BRJ7 211 aaKnown RBP10.44□□□□□ -0.74
PSEN1-221ENST00000557293 TMEM246Q9BRR3 403 aa10.44□□□□□ -0.74
PSEN1-221ENST00000557293 SLC19A3Q9BZV2 496 aa10.44□□□□□ -0.74
PSEN1-221ENST00000557293 C16orf95Q9H693 158 aa10.44□□□□□ -0.74
PSEN1-221ENST00000557293 NANOGQ9H9S0 305 aa10.44□□□□□ -0.74
PSEN1-221ENST00000557293 CACYBPQ9HB71 228 aaKnown RBP10.44□□□□□ -0.74
PSEN1-221ENST00000557293 GCM1Q9NP62 436 aa10.44□□□□□ -0.74
PSEN1-221ENST00000557293 IL19Q9UHD0 177 aa10.44□□□□□ -0.74
PSEN1-221ENST00000557293 CENPVL3A0A0U1RRI6 287 aa10.43□□□□□ -0.74
PSEN1-221ENST00000557293 SLC22A3O75751 556 aa10.43□□□□□ -0.74
PSEN1-221ENST00000557293 OR6A2O95222 327 aa10.43□□□□□ -0.74
PSEN1-221ENST00000557293 SLC2A10O95528 541 aa10.43□□□□□ -0.74
PSEN1-221ENST00000557293 ANP32DO95626 131 aa10.43□□□□□ -0.74
PSEN1-221ENST00000557293 IGHV4-59P01825 116 aa10.43□□□□□ -0.74
PSEN1-221ENST00000557293 IGHG1P01857 330 aa10.43□□□□□ -0.74
PSEN1-221ENST00000557293 KITLGP21583 273 aa10.43□□□□□ -0.74
PSEN1-221ENST00000557293 EPHA3P29320 983 aa10.43□□□□□ -0.74
PSEN1-221ENST00000557293 ZNF84P51523 738 aa10.43□□□□□ -0.74
PSEN1-221ENST00000557293 UGT2B15P54855 530 aa10.43□□□□□ -0.74
PSEN1-221ENST00000557293 GNB2P62879 340 aa10.43□□□□□ -0.74
PSEN1-221ENST00000557293 ERVK-25P63136 954 aa10.43□□□□□ -0.74
PSEN1-221ENST00000557293 SWT1Q5T5J6 900 aaKnown RBP10.43□□□□□ -0.74
PSEN1-221ENST00000557293 FAM27BQ5VT28 67 aa10.43□□□□□ -0.74
PSEN1-221ENST00000557293 HHATQ5VTY9 493 aa10.43□□□□□ -0.74
PSEN1-221ENST00000557293 LYPD2Q6UXB3 125 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms