RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 PJVKQ0ZLH3 352 aa8.17□□□□□ -1.1
SYNE3-205ENST00000557275 EMC4Q5J8M3 183 aa8.17□□□□□ -1.1
SYNE3-205ENST00000557275 UMODL1-AS1Q8N2C9 162 aa8.17□□□□□ -1.1
SYNE3-205ENST00000557275 OR5A2Q8NGI9 324 aa8.17□□□□□ -1.1
SYNE3-205ENST00000557275 SLC25A43Q8WUT9 341 aaPredicted RBP8.17□□□□□ -1.1
SYNE3-205ENST00000557275 EMID1Q96A84 441 aaPredicted RBP8.17□□□□□ -1.1
SYNE3-205ENST00000557275 B4DEV8 164 aa8.17□□□□□ -1.1
SYNE3-205ENST00000557275 MFAP5Q13361 173 aa8.17□□□□□ -1.1
SYNE3-205ENST00000557275 DEFB132Q7Z7B7 95 aa8.17□□□□□ -1.1
SYNE3-205ENST00000557275 GLIS3Q8NEA6 775 aa8.17□□□□□ -1.1
SYNE3-205ENST00000557275 SLC35A4Q96G79 324 aa8.17□□□□□ -1.1
SYNE3-205ENST00000557275 FAM206AQ9NX38 181 aa8.17□□□□□ -1.1
SYNE3-205ENST00000557275 HHEXQ03014 270 aa8.17□□□□□ -1.1
SYNE3-205ENST00000557275 PIN1Q13526 163 aaPredicted RBP8.17□□□□□ -1.1
SYNE3-205ENST00000557275 C18orf63Q68DL7 685 aa8.17□□□□□ -1.1
SYNE3-205ENST00000557275 ZNF429Q86V71 674 aa8.17□□□□□ -1.1
SYNE3-205ENST00000557275 ANAPC16Q96DE5 110 aa8.17□□□□□ -1.1
SYNE3-205ENST00000557275 INPP5KQ9BT40 448 aa8.17□□□□□ -1.1
SYNE3-205ENST00000557275 FAM103A1Q9BTL3 118 aaKnown RBP8.17□□□□□ -1.1
SYNE3-205ENST00000557275 CSNK1G3Q9Y6M4 447 aa8.17□□□□□ -1.1
SYNE3-205ENST00000557275 TRABD2BA6NFA1 517 aa8.17□□□□□ -1.1
SYNE3-205ENST00000557275 SHHQ15465 462 aa8.17□□□□□ -1.1
SYNE3-205ENST00000557275 DTWD1Q8N5C7 304 aa8.17□□□□□ -1.1
SYNE3-205ENST00000557275 NOX4Q9NPH5 578 aa8.17□□□□□ -1.1
SYNE3-205ENST00000557275 SLC5A10A0PJK1 596 aa8.17□□□□□ -1.1
SYNE3-205ENST00000557275 FZD6O60353 706 aa8.17□□□□□ -1.1
SYNE3-205ENST00000557275 POU3F1Q03052 451 aaPredicted RBP8.17□□□□□ -1.1
SYNE3-205ENST00000557275 GATSQ8NAP1 163 aa8.17□□□□□ -1.1
SYNE3-205ENST00000557275 RSG1Q9BU20 258 aa8.17□□□□□ -1.1
SYNE3-205ENST00000557275 PLIN4Q96Q06 1357 aa8.16□□□□□ -1.1
SYNE3-205ENST00000557275 TCRBV3S1A0A5B6 114 aa8.16□□□□□ -1.1
SYNE3-205ENST00000557275 ARNTLO00327 626 aa8.16□□□□□ -1.1
SYNE3-205ENST00000557275 SLC35E2BP0CK96 405 aa8.16□□□□□ -1.1
SYNE3-205ENST00000557275 OR7A5Q15622 319 aa8.16□□□□□ -1.1
SYNE3-205ENST00000557275 PLAC9Q5JTB6 97 aa8.16□□□□□ -1.1
SYNE3-205ENST00000557275 PSAPL1Q6NUJ1 521 aa8.16□□□□□ -1.1
SYNE3-205ENST00000557275 GRAMD2AQ8IUY3 354 aa8.16□□□□□ -1.1
SYNE3-205ENST00000557275 ANTXRLA6NF34 631 aa8.16□□□□□ -1.1
SYNE3-205ENST00000557275 C17orf105B2RV13 164 aa8.16□□□□□ -1.1
SYNE3-205ENST00000557275 C21orf33P30042 268 aaPredicted RBP8.16□□□□□ -1.1
SYNE3-205ENST00000557275 ID2Q02363 134 aa8.16□□□□□ -1.1
SYNE3-205ENST00000557275 PKIBQ9C010 78 aa8.16□□□□□ -1.1
SYNE3-205ENST00000557275 NXF5Q9H1B4 397 aaKnown RBP8.16□□□□□ -1.1
SYNE3-205ENST00000557275 ZNF443Q9Y2A4 671 aaPredicted RBP8.16□□□□□ -1.1
SYNE3-205ENST00000557275 NBASA2RRP1 2371 aa8.16□□□□□ -1.1
SYNE3-205ENST00000557275 OR2T8A6NH00 312 aa8.16□□□□□ -1.1
SYNE3-205ENST00000557275 GNG4P50150 75 aa8.16□□□□□ -1.1
SYNE3-205ENST00000557275 TUSC5Q8IXB3 177 aa8.16□□□□□ -1.1
SYNE3-205ENST00000557275 GPR150Q8NGU9 434 aa8.16□□□□□ -1.1
SYNE3-205ENST00000557275 CYB5D2Q8WUJ1 264 aa8.16□□□□□ -1.1
SYNE3-205ENST00000557275 SLC35B4Q969S0 331 aa8.16□□□□□ -1.1
SYNE3-205ENST00000557275 A0A1B0GUH1 482 aa8.16□□□□□ -1.1
SYNE3-205ENST00000557275 AP1G1O43747 822 aa8.16□□□□□ -1.1
SYNE3-205ENST00000557275 RPLP1P05386 114 aaKnown RBP8.16□□□□□ -1.1
SYNE3-205ENST00000557275 SNRPGP62308 76 aaKnown RBP8.16□□□□□ -1.1
SYNE3-205ENST00000557275 SHC2P98077 582 aa8.16□□□□□ -1.1
SYNE3-205ENST00000557275 CHST11Q9NPF2 352 aa8.16□□□□□ -1.1
SYNE3-205ENST00000557275 TRAV36DV7A0A075B6V5 113 aa8.16□□□□□ -1.1
SYNE3-205ENST00000557275 A0A0J9YY10 115 aa8.16□□□□□ -1.1
SYNE3-205ENST00000557275 LMX1BO60663 402 aa8.16□□□□□ -1.1
SYNE3-205ENST00000557275 TFAP2BQ92481 460 aa8.16□□□□□ -1.1
SYNE3-205ENST00000557275 GALMQ96C23 342 aa8.16□□□□□ -1.1
SYNE3-205ENST00000557275 RPS26P62854 115 aaKnown RBP8.16□□□□□ -1.1
SYNE3-205ENST00000557275 MMP26Q9NRE1 261 aa8.16□□□□□ -1.1
SYNE3-205ENST00000557275 SYT5O00445 386 aa8.16□□□□□ -1.1
SYNE3-205ENST00000557275 COX7A2P2O60397 106 aa8.16□□□□□ -1.1
SYNE3-205ENST00000557275 NME1P15531 152 aaKnown RBP8.16□□□□□ -1.1
SYNE3-205ENST00000557275 IL24Q13007 206 aa8.16□□□□□ -1.1
SYNE3-205ENST00000557275 DOC2BQ14184 412 aa8.16□□□□□ -1.1
SYNE3-205ENST00000557275 DHRS4L2Q6PKH6 230 aa8.16□□□□□ -1.1
SYNE3-205ENST00000557275 VASH2Q86V25 355 aa8.16□□□□□ -1.1
SYNE3-205ENST00000557275 LRP11Q86VZ4 500 aa8.16□□□□□ -1.1
SYNE3-205ENST00000557275 OR2AK2Q8NG84 335 aa8.16□□□□□ -1.1
SYNE3-205ENST00000557275 SIGLEC10Q96LC7 697 aa8.16□□□□□ -1.1
SYNE3-205ENST00000557275 NTMT1Q9BV86 223 aa8.16□□□□□ -1.1
SYNE3-205ENST00000557275 KCNK12Q9HB15 430 aa8.16□□□□□ -1.1
SYNE3-205ENST00000557275 MANBALQ9NQG1 85 aa8.16□□□□□ -1.1
SYNE3-205ENST00000557275 GM2AP17900 193 aa8.16□□□□□ -1.1
SYNE3-205ENST00000557275 ZNF140P52738 457 aaPredicted RBP8.16□□□□□ -1.1
SYNE3-205ENST00000557275 XYLT2Q9H1B5 865 aa8.16□□□□□ -1.1
SYNE3-205ENST00000557275 CSAG2Q9Y5P2 127 aa8.16□□□□□ -1.1
SYNE3-205ENST00000557275 PIGFQ07326 219 aa8.16□□□□□ -1.1
SYNE3-205ENST00000557275 ETFDHQ16134 617 aa8.16□□□□□ -1.1
SYNE3-205ENST00000557275 SOWAHAQ2M3V2 549 aa8.16□□□□□ -1.1
SYNE3-205ENST00000557275 FUNDC1Q8IVP5 155 aa8.16□□□□□ -1.1
SYNE3-205ENST00000557275 MS4A10Q96PG2 267 aa8.16□□□□□ -1.1
SYNE3-205ENST00000557275 DPH2Q9BQC3 489 aaPredicted RBP8.16□□□□□ -1.1
SYNE3-205ENST00000557275 GOLGA2P5Q9HBQ8 144 aa8.16□□□□□ -1.1
SYNE3-205ENST00000557275 FZD1Q9UP38 647 aa8.16□□□□□ -1.1
SYNE3-205ENST00000557275 SH2D1BO14796 132 aa8.16□□□□□ -1.1
SYNE3-205ENST00000557275 SSSCA1O60232 199 aa8.16□□□□□ -1.1
SYNE3-205ENST00000557275 OR2J3O76001 311 aa8.16□□□□□ -1.1
SYNE3-205ENST00000557275 CST3P01034 146 aaPredicted RBP8.16□□□□□ -1.1
SYNE3-205ENST00000557275 ABOP16442 354 aa8.16□□□□□ -1.1
SYNE3-205ENST00000557275 INHBCP55103 352 aa8.16□□□□□ -1.1
SYNE3-205ENST00000557275 CD226Q15762 336 aa8.16□□□□□ -1.1
SYNE3-205ENST00000557275 CDHR3Q6ZTQ4 885 aa8.16□□□□□ -1.1
SYNE3-205ENST00000557275 RTL8AQ9BWD3 113 aa8.16□□□□□ -1.1
SYNE3-205ENST00000557275 IL37Q9NZH6 218 aa8.16□□□□□ -1.1
SYNE3-205ENST00000557275 CD207Q9UJ71 328 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms