RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 CPOQ8IVL8 374 aa4.68□□□□□ -1.66
ATXN3-244ENST00000556898 PM20D2Q8IYS1 436 aa4.68□□□□□ -1.66
ATXN3-244ENST00000556898 C8orf59Q8N0T1 100 aaPredicted RBP4.68□□□□□ -1.66
ATXN3-244ENST00000556898 GCNT2Q8N0V5 402 aa4.68□□□□□ -1.66
ATXN3-244ENST00000556898 MARVELD2Q8N4S9 558 aa4.68□□□□□ -1.66
ATXN3-244ENST00000556898 ZNF808Q8N4W9 903 aaPredicted RBP4.68□□□□□ -1.66
ATXN3-244ENST00000556898 SYT14Q8NB59 555 aa4.68□□□□□ -1.66
ATXN3-244ENST00000556898 NAXEQ8NCW5 288 aa4.68□□□□□ -1.66
ATXN3-244ENST00000556898 NPEPL1Q8NDH3 523 aa4.68□□□□□ -1.66
ATXN3-244ENST00000556898 ADPRHL1Q8NDY3 354 aa4.68□□□□□ -1.66
ATXN3-244ENST00000556898 BPIFB6Q8NFQ5 453 aa4.68□□□□□ -1.66
ATXN3-244ENST00000556898 RHOXF1Q8NHV9 184 aa4.68□□□□□ -1.66
ATXN3-244ENST00000556898 FAM57AQ8TBR7 257 aa4.68□□□□□ -1.66
ATXN3-244ENST00000556898 RNF128Q8TEB7 428 aa4.68□□□□□ -1.66
ATXN3-244ENST00000556898 ITLN2Q8WWU7 325 aaPredicted RBP4.68□□□□□ -1.66
ATXN3-244ENST00000556898 PTP4A1Q93096 173 aa4.68□□□□□ -1.66
ATXN3-244ENST00000556898 CPNE4Q96A23 557 aaPredicted RBP4.68□□□□□ -1.66
ATXN3-244ENST00000556898 ZHX1-C8orf76Q96EF9 292 aa4.68□□□□□ -1.66
ATXN3-244ENST00000556898 ANKRD60Q9BZ19 345 aa4.68□□□□□ -1.66
ATXN3-244ENST00000556898 OR51V1Q9H2C8 321 aa4.68□□□□□ -1.66
ATXN3-244ENST00000556898 TXNIPQ9H3M7 391 aa4.68□□□□□ -1.66
ATXN3-244ENST00000556898 RERGLQ9H628 205 aa4.68□□□□□ -1.66
ATXN3-244ENST00000556898 CALHM2Q9HA72 323 aa4.68□□□□□ -1.66
ATXN3-244ENST00000556898 CMC2Q9NRP2 79 aa4.68□□□□□ -1.66
ATXN3-244ENST00000556898 ASB6Q9NWX5 421 aa4.68□□□□□ -1.66
ATXN3-244ENST00000556898 CLCF1Q9UBD9 225 aa4.68□□□□□ -1.66
ATXN3-244ENST00000556898 GRHPRQ9UBQ7 328 aa4.68□□□□□ -1.66
ATXN3-244ENST00000556898 PRSS50Q9UI38 385 aa4.68□□□□□ -1.66
ATXN3-244ENST00000556898 TINAGQ9UJW2 476 aa4.68□□□□□ -1.66
ATXN3-244ENST00000556898 RASD1Q9Y272 281 aa4.68□□□□□ -1.66
ATXN3-244ENST00000556898 B3GALT5Q9Y2C3 310 aa4.68□□□□□ -1.66
ATXN3-244ENST00000556898 FAM215AQ9Y5M1 114 aa4.68□□□□□ -1.66
ATXN3-244ENST00000556898 FLVCR1Q9Y5Y0 555 aa4.68□□□□□ -1.66
ATXN3-244ENST00000556898 POLEQ07864 2286 aa4.68□□□□□ -1.66
ATXN3-244ENST00000556898 CENPEQ02224 2701 aa4.68□□□□□ -1.66
ATXN3-244ENST00000556898 LRBAP50851 2863 aa4.68□□□□□ -1.66
ATXN3-244ENST00000556898 SHANK1Q9Y566 2161 aa4.68□□□□□ -1.66
ATXN3-244ENST00000556898 HIVEP3Q5T1R4 2406 aa4.67□□□□□ -1.66
ATXN3-244ENST00000556898 SLC22A23A1A5C7 686 aa4.67□□□□□ -1.66
ATXN3-244ENST00000556898 SH3D21A4FU49 640 aa4.67□□□□□ -1.66
ATXN3-244ENST00000556898 TVP23AA6NH52 213 aa4.67□□□□□ -1.66
ATXN3-244ENST00000556898 M0R3G1 203 aa4.67□□□□□ -1.66
ATXN3-244ENST00000556898 ARPC3O15145 178 aa4.67□□□□□ -1.66
ATXN3-244ENST00000556898 EIF1BO60739 113 aaKnown RBP4.67□□□□□ -1.66
ATXN3-244ENST00000556898 FAM20BO75063 409 aa4.67□□□□□ -1.66
ATXN3-244ENST00000556898 SEC14L2O76054 403 aa4.67□□□□□ -1.66
ATXN3-244ENST00000556898 MPZL1O95297 269 aa4.67□□□□□ -1.66
ATXN3-244ENST00000556898 TXNDC12O95881 172 aa4.67□□□□□ -1.66
ATXN3-244ENST00000556898 HMGN1P05114 100 aa4.67□□□□□ -1.66
ATXN3-244ENST00000556898 RPSAP08865 295 aaKnown RBP4.67□□□□□ -1.66
ATXN3-244ENST00000556898 MRPL3P09001 348 aaKnown RBP4.67□□□□□ -1.66
ATXN3-244ENST00000556898 PGA4P0DJD7 388 aa4.67□□□□□ -1.66
ATXN3-244ENST00000556898 PGA3P0DJD8 388 aa4.67□□□□□ -1.66
ATXN3-244ENST00000556898 ACADSP16219 412 aa4.67□□□□□ -1.66
ATXN3-244ENST00000556898 CTLA4P16410 223 aa4.67□□□□□ -1.66
ATXN3-244ENST00000556898 ZNF43P17038 809 aa4.67□□□□□ -1.66
ATXN3-244ENST00000556898 ACVR2AP27037 513 aa4.67□□□□□ -1.66
ATXN3-244ENST00000556898 SDHAP31040 664 aa4.67□□□□□ -1.66
ATXN3-244ENST00000556898 RPS27P42677 84 aaKnown RBP4.67□□□□□ -1.66
ATXN3-244ENST00000556898 HSPA13P48723 471 aa4.67□□□□□ -1.66
ATXN3-244ENST00000556898 CENPAP49450 140 aa4.67□□□□□ -1.66
ATXN3-244ENST00000556898 HCCSP53701 268 aa4.67□□□□□ -1.66
ATXN3-244ENST00000556898 CDH15P55291 814 aa4.67□□□□□ -1.66
ATXN3-244ENST00000556898 CDC42P60953 191 aa4.67□□□□□ -1.66
ATXN3-244ENST00000556898 IL18R1Q13478 541 aa4.67□□□□□ -1.66
ATXN3-244ENST00000556898 MED21Q13503 144 aa4.67□□□□□ -1.66
ATXN3-244ENST00000556898 APOFQ13790 326 aa4.67□□□□□ -1.66
ATXN3-244ENST00000556898 ANKDD1AQ495B1 522 aa4.67□□□□□ -1.66
ATXN3-244ENST00000556898 KLHL12Q53G59 568 aa4.67□□□□□ -1.66
ATXN3-244ENST00000556898 KRTCAP3Q53RY4 240 aa4.67□□□□□ -1.66
ATXN3-244ENST00000556898 C6orf141Q5SZD1 244 aa4.67□□□□□ -1.66
ATXN3-244ENST00000556898 C1orf185Q5T7R7 199 aa4.67□□□□□ -1.66
ATXN3-244ENST00000556898 LINC01590Q5TEZ4 76 aa4.67□□□□□ -1.66
ATXN3-244ENST00000556898 TSPO2Q5TGU0 170 aa4.67□□□□□ -1.66
ATXN3-244ENST00000556898 C9orf135Q5VTT2 229 aa4.67□□□□□ -1.66
ATXN3-244ENST00000556898 STEAP3Q658P3 488 aa4.67□□□□□ -1.66
ATXN3-244ENST00000556898 VWA1Q6PCB0 445 aa4.67□□□□□ -1.66
ATXN3-244ENST00000556898 CHMP1BQ7LBR1 199 aa4.67□□□□□ -1.66
ATXN3-244ENST00000556898 CXXC5Q7LFL8 322 aaKnown RBP4.67□□□□□ -1.66
ATXN3-244ENST00000556898 AAED1Q7RTV5 226 aa4.67□□□□□ -1.66
ATXN3-244ENST00000556898 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.67□□□□□ -1.66
ATXN3-244ENST00000556898 TMEM123Q8N131 208 aa4.67□□□□□ -1.66
ATXN3-244ENST00000556898 OR6V1Q8N148 313 aa4.67□□□□□ -1.66
ATXN3-244ENST00000556898 ZNF786Q8N393 782 aa4.67□□□□□ -1.66
ATXN3-244ENST00000556898 ARIH2OSQ8N7S6 290 aa4.67□□□□□ -1.66
ATXN3-244ENST00000556898 TMEM163Q8TC26 289 aa4.67□□□□□ -1.66
ATXN3-244ENST00000556898 NSMAFQ92636 917 aa4.67□□□□□ -1.66
ATXN3-244ENST00000556898 GGHQ92820 318 aa4.67□□□□□ -1.66
ATXN3-244ENST00000556898 INTS12Q96CB8 462 aaKnown RBP4.67□□□□□ -1.66
ATXN3-244ENST00000556898 NMD3Q96D46 503 aaKnown RBP4.67□□□□□ -1.66
ATXN3-244ENST00000556898 ZMYND19Q96E35 227 aaPredicted RBP4.67□□□□□ -1.66
ATXN3-244ENST00000556898 DTNBP1Q96EV8 351 aa4.67□□□□□ -1.66
ATXN3-244ENST00000556898 C14orf79Q96F83 325 aa4.67□□□□□ -1.66
ATXN3-244ENST00000556898 PLEKHA8Q96JA3 519 aa4.67□□□□□ -1.66
ATXN3-244ENST00000556898 LRR1Q96L50 414 aa4.67□□□□□ -1.66
ATXN3-244ENST00000556898 ZNF582Q96NG8 517 aaPredicted RBP4.67□□□□□ -1.66
ATXN3-244ENST00000556898 CLUHP3Q96NS8 147 aa4.67□□□□□ -1.66
ATXN3-244ENST00000556898 SLC38A2Q96QD8 506 aa4.67□□□□□ -1.66
ATXN3-244ENST00000556898 OR2M2Q96R28 347 aa4.67□□□□□ -1.66
ATXN3-244ENST00000556898 APOL4Q9BPW4 351 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms