RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 OR52R1Q8NGF1 315 aa3.07□□□□□ -1.92
SEC23A-207ENST00000554615 OR6M1Q8NGM8 313 aa3.07□□□□□ -1.92
SEC23A-207ENST00000554615 LGALS14Q8TCE9 139 aa3.07□□□□□ -1.92
SEC23A-207ENST00000554615 GIMAP1Q8WWP7 306 aa3.07□□□□□ -1.92
SEC23A-207ENST00000554615 EXOSC8Q96B26 276 aaKnown RBP3.07□□□□□ -1.92
SEC23A-207ENST00000554615 KTI12Q96EK9 354 aaPredicted RBP3.07□□□□□ -1.92
SEC23A-207ENST00000554615 DIRAS2Q96HU8 199 aa3.07□□□□□ -1.92
SEC23A-207ENST00000554615 TMEM41AQ96HV5 264 aa3.07□□□□□ -1.92
SEC23A-207ENST00000554615 FERD3LQ96RJ6 166 aa3.07□□□□□ -1.92
SEC23A-207ENST00000554615 KLHDC3Q9BQ90 382 aa3.07□□□□□ -1.92
SEC23A-207ENST00000554615 PIGQQ9BRB3 760 aa3.07□□□□□ -1.92
SEC23A-207ENST00000554615 GSX2Q9BZM3 304 aa3.07□□□□□ -1.92
SEC23A-207ENST00000554615 C6orf62Q9GZU0 229 aaPredicted RBP3.07□□□□□ -1.92
SEC23A-207ENST00000554615 PAQR5Q9NXK6 330 aaPredicted RBP3.07□□□□□ -1.92
SEC23A-207ENST00000554615 KLHL28Q9NXS3 571 aa3.07□□□□□ -1.92
SEC23A-207ENST00000554615 PPP4R1LQ9P1A2 415 aa3.07□□□□□ -1.92
SEC23A-207ENST00000554615 ASH2LQ9UBL3 628 aa3.07□□□□□ -1.92
SEC23A-207ENST00000554615 GPR132Q9UNW8 380 aa3.07□□□□□ -1.92
SEC23A-207ENST00000554615 PLCL2Q9UPR0 1127 aa3.07□□□□□ -1.92
SEC23A-207ENST00000554615 HRH3Q9Y5N1 445 aa3.07□□□□□ -1.92
SEC23A-207ENST00000554615 TNRC18O15417 2968 aaPredicted RBP3.07□□□□□ -1.92
SEC23A-207ENST00000554615 MPDZO75970 2070 aa3.06□□□□□ -1.92
SEC23A-207ENST00000554615 DSCAML1Q8TD84 2053 aa3.06□□□□□ -1.92
SEC23A-207ENST00000554615 A0A0D9SG52 128 aa3.06□□□□□ -1.92
SEC23A-207ENST00000554615 A6NIZ1 184 aa3.06□□□□□ -1.92
SEC23A-207ENST00000554615 RHPN2P1A8MT19 583 aa3.06□□□□□ -1.92
SEC23A-207ENST00000554615 DCTN6O00399 190 aa3.06□□□□□ -1.92
SEC23A-207ENST00000554615 SAP18O00422 153 aaKnown RBP3.06□□□□□ -1.92
SEC23A-207ENST00000554615 FLRT2O43155 660 aa3.06□□□□□ -1.92
SEC23A-207ENST00000554615 BCL2L11O43521 198 aa3.06□□□□□ -1.92
SEC23A-207ENST00000554615 ZNF354AO60765 605 aaPredicted RBP3.06□□□□□ -1.92
SEC23A-207ENST00000554615 OR2B3O76000 313 aa3.06□□□□□ -1.92
SEC23A-207ENST00000554615 PNPP00491 289 aa3.06□□□□□ -1.92
SEC23A-207ENST00000554615 PCCBP05166 539 aa3.06□□□□□ -1.92
SEC23A-207ENST00000554615 OR8U8P0C7N1 319 aa3.06□□□□□ -1.92
SEC23A-207ENST00000554615 IDH2P48735 452 aaKnown RBP3.06□□□□□ -1.92
SEC23A-207ENST00000554615 SLC26A5P58743 744 aa3.06□□□□□ -1.92
SEC23A-207ENST00000554615 RAP1BP61224 184 aa3.06□□□□□ -1.92
SEC23A-207ENST00000554615 RAP1AP62834 184 aa3.06□□□□□ -1.92
SEC23A-207ENST00000554615 LRRC32Q14392 662 aa3.06□□□□□ -1.92
SEC23A-207ENST00000554615 CR1LQ2VPA4 569 aa3.06□□□□□ -1.92
SEC23A-207ENST00000554615 LINC00303Q3SY05 128 aa3.06□□□□□ -1.92
SEC23A-207ENST00000554615 RFPL4BQ6ZWI9 263 aa3.06□□□□□ -1.92
SEC23A-207ENST00000554615 SPRED2Q7Z698 418 aa3.06□□□□□ -1.92
SEC23A-207ENST00000554615 ESX1Q8N693 406 aa3.06□□□□□ -1.92
SEC23A-207ENST00000554615 OR2AK2Q8NG84 335 aa3.06□□□□□ -1.92
SEC23A-207ENST00000554615 OR52N5Q8NH56 324 aa3.06□□□□□ -1.92
SEC23A-207ENST00000554615 OR6X1Q8NH79 312 aa3.06□□□□□ -1.92
SEC23A-207ENST00000554615 MYLIPQ8WY64 445 aa3.06□□□□□ -1.92
SEC23A-207ENST00000554615 HTRA1Q92743 480 aa3.06□□□□□ -1.92
SEC23A-207ENST00000554615 SNAPC3Q92966 411 aa3.06□□□□□ -1.92
SEC23A-207ENST00000554615 APOBEC3DQ96AK3 386 aaPredicted RBP3.06□□□□□ -1.92
SEC23A-207ENST00000554615 SAT2Q96F10 170 aaPredicted RBP3.06□□□□□ -1.92
SEC23A-207ENST00000554615 MOGAT1Q96PD6 335 aa3.06□□□□□ -1.92
SEC23A-207ENST00000554615 GSDMCQ9BYG8 508 aa3.06□□□□□ -1.92
SEC23A-207ENST00000554615 LINC00470Q9BZP3 86 aa3.06□□□□□ -1.92
SEC23A-207ENST00000554615 WWTR1Q9GZV5 400 aa3.06□□□□□ -1.92
SEC23A-207ENST00000554615 HDHD2Q9H0R4 259 aa3.06□□□□□ -1.92
SEC23A-207ENST00000554615 POFUT1Q9H488 388 aa3.06□□□□□ -1.92
SEC23A-207ENST00000554615 NOX4Q9NPH5 578 aa3.06□□□□□ -1.92
SEC23A-207ENST00000554615 FBXL4Q9UKA2 621 aa3.06□□□□□ -1.92
SEC23A-207ENST00000554615 STARD10Q9Y365 291 aa3.06□□□□□ -1.92
SEC23A-207ENST00000554615 DUXBA0A1W2PPF3 345 aa3.06□□□□□ -1.92
SEC23A-207ENST00000554615 OR6C6A6NF89 314 aa3.06□□□□□ -1.92
SEC23A-207ENST00000554615 REM1O75628 298 aa3.06□□□□□ -1.92
SEC23A-207ENST00000554615 PTBP3O95758 552 aaKnown RBP3.06□□□□□ -1.92
SEC23A-207ENST00000554615 PDGFAP04085 211 aa3.06□□□□□ -1.92
SEC23A-207ENST00000554615 FCGR3AP08637 254 aa3.06□□□□□ -1.92
SEC23A-207ENST00000554615 CLUP10909 449 aa3.06□□□□□ -1.92
SEC23A-207ENST00000554615 MMP9P14780 707 aa3.06□□□□□ -1.92
SEC23A-207ENST00000554615 CDK2P24941 298 aa3.06□□□□□ -1.92
SEC23A-207ENST00000554615 CCKBRP32239 447 aa3.06□□□□□ -1.92
SEC23A-207ENST00000554615 CEACAM6P40199 344 aa3.06□□□□□ -1.92
SEC23A-207ENST00000554615 VIPR2P41587 438 aa3.06□□□□□ -1.92
SEC23A-207ENST00000554615 ARPP19P56211 112 aa3.06□□□□□ -1.92
SEC23A-207ENST00000554615 RPL18Q07020 188 aaKnown RBP3.06□□□□□ -1.92
SEC23A-207ENST00000554615 SPEM2Q0P670 501 aa3.06□□□□□ -1.92
SEC23A-207ENST00000554615 CBFBQ13951 182 aa3.06□□□□□ -1.92
SEC23A-207ENST00000554615 PLPPR5Q32ZL2 321 aa3.06□□□□□ -1.92
SEC23A-207ENST00000554615 PVRIGQ6DKI7 326 aa3.06□□□□□ -1.92
SEC23A-207ENST00000554615 RHBDD2Q6NTF9 364 aa3.06□□□□□ -1.92
SEC23A-207ENST00000554615 GRINAQ7Z429 371 aa3.06□□□□□ -1.92
SEC23A-207ENST00000554615 DCXRQ7Z4W1 244 aa3.06□□□□□ -1.92
SEC23A-207ENST00000554615 LURAP1LQ8IV03 231 aa3.06□□□□□ -1.92
SEC23A-207ENST00000554615 OR14K1Q8NGZ2 314 aa3.06□□□□□ -1.92
SEC23A-207ENST00000554615 OR52I2Q8NH67 350 aa3.06□□□□□ -1.92
SEC23A-207ENST00000554615 MOSPD2Q8NHP6 518 aa3.06□□□□□ -1.92
SEC23A-207ENST00000554615 ADAMTS17Q8TE56 1095 aa3.06□□□□□ -1.92
SEC23A-207ENST00000554615 ABTB1Q969K4 478 aaPredicted RBP3.06□□□□□ -1.92
SEC23A-207ENST00000554615 INTS12Q96CB8 462 aaKnown RBP3.06□□□□□ -1.92
SEC23A-207ENST00000554615 C5orf34Q96MH7 638 aa3.06□□□□□ -1.92
SEC23A-207ENST00000554615 RTBDNQ9BSG5 229 aaPredicted RBP3.06□□□□□ -1.92
SEC23A-207ENST00000554615 TEX12Q9BXU0 123 aa3.06□□□□□ -1.92
SEC23A-207ENST00000554615 STRADBQ9C0K7 418 aa3.06□□□□□ -1.92
SEC23A-207ENST00000554615 KLHL25Q9H0H3 589 aa3.06□□□□□ -1.92
SEC23A-207ENST00000554615 NCOR1P1Q9H4R4 102 aa3.06□□□□□ -1.92
SEC23A-207ENST00000554615 TIGARQ9NQ88 270 aa3.06□□□□□ -1.92
SEC23A-207ENST00000554615 TRAV1-1A0A0B4J248 108 aa3.06□□□□□ -1.92
SEC23A-207ENST00000554615 MEGF11A6BM72 1044 aa3.06□□□□□ -1.92
SEC23A-207ENST00000554615 RIIAD1A6NNX1 92 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms