RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 GSTM3P21266 225 aa5.57□□□□□ -1.52
SCFD1-212ENST00000554486 VHLP40337 213 aa5.57□□□□□ -1.52
SCFD1-212ENST00000554486 AQP4P55087 323 aa5.57□□□□□ -1.52
SCFD1-212ENST00000554486 CSNK2A1P68400 391 aaPredicted RBP5.57□□□□□ -1.52
SCFD1-212ENST00000554486 RPL18Q07020 188 aaKnown RBP5.57□□□□□ -1.52
SCFD1-212ENST00000554486 ZP4Q12836 540 aa5.57□□□□□ -1.52
SCFD1-212ENST00000554486 PMS2P3Q13401 168 aa5.57□□□□□ -1.52
SCFD1-212ENST00000554486 SNCBQ16143 134 aa5.57□□□□□ -1.52
SCFD1-212ENST00000554486 SGCBQ16585 318 aa5.57□□□□□ -1.52
SCFD1-212ENST00000554486 RFX4Q33E94 735 aa5.57□□□□□ -1.52
SCFD1-212ENST00000554486 MS4A18Q3C1V0 323 aa5.57□□□□□ -1.52
SCFD1-212ENST00000554486 PDSS1Q5T2R2 415 aa5.57□□□□□ -1.52
SCFD1-212ENST00000554486 WLSQ5T9L3 541 aa5.57□□□□□ -1.52
SCFD1-212ENST00000554486 MZT2AQ6P582 158 aa5.57□□□□□ -1.52
SCFD1-212ENST00000554486 SMARCD3Q6STE5 483 aa5.57□□□□□ -1.52
SCFD1-212ENST00000554486 GFRALQ6UXV0 394 aa5.57□□□□□ -1.52
SCFD1-212ENST00000554486 Q6ZPB1 254 aaPredicted RBP5.57□□□□□ -1.52
SCFD1-212ENST00000554486 Q6ZWC4 215 aa5.57□□□□□ -1.52
SCFD1-212ENST00000554486 H1FNTQ75WM6 255 aaPredicted RBP5.57□□□□□ -1.52
SCFD1-212ENST00000554486 HIST3H2AQ7L7L0 130 aa5.57□□□□□ -1.52
SCFD1-212ENST00000554486 NANOGNBQ7Z5D8 188 aa5.57□□□□□ -1.52
SCFD1-212ENST00000554486 IGFN1Q86VF2 1251 aa5.57□□□□□ -1.52
SCFD1-212ENST00000554486 PM20D2Q8IYS1 436 aa5.57□□□□□ -1.52
SCFD1-212ENST00000554486 KDM8Q8N371 416 aa5.57□□□□□ -1.52
SCFD1-212ENST00000554486 PACRGLQ8N7B6 248 aa5.57□□□□□ -1.52
SCFD1-212ENST00000554486 SCAIQ8N9R8 606 aa5.57□□□□□ -1.52
SCFD1-212ENST00000554486 MBD3L2Q8NHZ7 208 aaPredicted RBP5.57□□□□□ -1.52
SCFD1-212ENST00000554486 FANK1Q8TC84 345 aa5.57□□□□□ -1.52
SCFD1-212ENST00000554486 ROBO4Q8WZ75 1007 aa5.57□□□□□ -1.52
SCFD1-212ENST00000554486 HIST1H2ACQ93077 130 aa5.57□□□□□ -1.52
SCFD1-212ENST00000554486 SAMD8Q96LT4 415 aa5.57□□□□□ -1.52
SCFD1-212ENST00000554486 NAA11Q9BSU3 229 aaPredicted RBP5.57□□□□□ -1.52
SCFD1-212ENST00000554486 THAP7Q9BT49 309 aaPredicted RBP5.57□□□□□ -1.52
SCFD1-212ENST00000554486 TAPBPLQ9BX59 468 aa5.57□□□□□ -1.52
SCFD1-212ENST00000554486 GABARAPL3Q9BY60 117 aa5.57□□□□□ -1.52
SCFD1-212ENST00000554486 OR52D1Q9H346 318 aa5.57□□□□□ -1.52
SCFD1-212ENST00000554486 C8orf4Q9NR00 106 aa5.57□□□□□ -1.52
SCFD1-212ENST00000554486 PNPLA3Q9NST1 481 aa5.57□□□□□ -1.52
SCFD1-212ENST00000554486 IL20Q9NYY1 176 aa5.57□□□□□ -1.52
SCFD1-212ENST00000554486 B3GAT1Q9P2W7 334 aa5.57□□□□□ -1.52
SCFD1-212ENST00000554486 IL20RAQ9UHF4 553 aa5.57□□□□□ -1.52
SCFD1-212ENST00000554486 B3GALT5Q9Y2C3 310 aa5.57□□□□□ -1.52
SCFD1-212ENST00000554486 LRCH1Q9Y2L9 728 aa5.57□□□□□ -1.52
SCFD1-212ENST00000554486 ZNF835Q9Y2P0 537 aa5.57□□□□□ -1.52
SCFD1-212ENST00000554486 HIVEP3Q5T1R4 2406 aa5.57□□□□□ -1.52
SCFD1-212ENST00000554486 LOC102725191A0A1B0GVB3 256 aa5.56□□□□□ -1.52
SCFD1-212ENST00000554486 A0A1W2PNV4 684 aa5.56□□□□□ -1.52
SCFD1-212ENST00000554486 MCIDASD6RGH6 385 aa5.56□□□□□ -1.52
SCFD1-212ENST00000554486 C11orf98E9PRG8 122 aa5.56□□□□□ -1.52
SCFD1-212ENST00000554486 H0YJX3 145 aa5.56□□□□□ -1.52
SCFD1-212ENST00000554486 TRAF3IP2O43734 574 aaPredicted RBP5.56□□□□□ -1.52
SCFD1-212ENST00000554486 EIF1BO60739 113 aaKnown RBP5.56□□□□□ -1.52
SCFD1-212ENST00000554486 CYTIPO60759 359 aa5.56□□□□□ -1.52
SCFD1-212ENST00000554486 AQP8O94778 261 aa5.56□□□□□ -1.52
SCFD1-212ENST00000554486 NXPH3O95157 252 aa5.56□□□□□ -1.52
SCFD1-212ENST00000554486 NDUFB2O95178 105 aa5.56□□□□□ -1.52
SCFD1-212ENST00000554486 RCBTB2O95199 551 aa5.56□□□□□ -1.52
SCFD1-212ENST00000554486 SYNGR4O95473 234 aa5.56□□□□□ -1.52
SCFD1-212ENST00000554486 TGM6O95932 706 aa5.56□□□□□ -1.52
SCFD1-212ENST00000554486 TPOP07202 933 aa5.56□□□□□ -1.52
SCFD1-212ENST00000554486 ADORA3P0DMS8 318 aa5.56□□□□□ -1.52
SCFD1-212ENST00000554486 HLA-DOBP13765 273 aa5.56□□□□□ -1.52
SCFD1-212ENST00000554486 POU1F1P28069 291 aa5.56□□□□□ -1.52
SCFD1-212ENST00000554486 GTF2E2P29084 291 aaKnown RBP5.56□□□□□ -1.52
SCFD1-212ENST00000554486 CRISP1P54107 249 aa5.56□□□□□ -1.52
SCFD1-212ENST00000554486 RAD23AP54725 363 aa5.56□□□□□ -1.52
SCFD1-212ENST00000554486 NUP107P57740 925 aa5.56□□□□□ -1.52
SCFD1-212ENST00000554486 PRPS1P60891 318 aa5.56□□□□□ -1.52
SCFD1-212ENST00000554486 RPS3AP61247 264 aaKnown RBP5.56□□□□□ -1.52
SCFD1-212ENST00000554486 ESRRGP62508 458 aa5.56□□□□□ -1.52
SCFD1-212ENST00000554486 CDK5Q00535 292 aa5.56□□□□□ -1.52
SCFD1-212ENST00000554486 IL1RL1Q01638 556 aa5.56□□□□□ -1.52
SCFD1-212ENST00000554486 PUDPQ08623 228 aa5.56□□□□□ -1.52
SCFD1-212ENST00000554486 NPRL3Q12980 569 aa5.56□□□□□ -1.52
SCFD1-212ENST00000554486 SLC17A1Q14916 467 aa5.56□□□□□ -1.52
SCFD1-212ENST00000554486 PON3Q15166 354 aa5.56□□□□□ -1.52
SCFD1-212ENST00000554486 PGGHGQ32M88 737 aa5.56□□□□□ -1.52
SCFD1-212ENST00000554486 ANKDD1AQ495B1 522 aa5.56□□□□□ -1.52
SCFD1-212ENST00000554486 SLC36A3Q495N2 470 aa5.56□□□□□ -1.52
SCFD1-212ENST00000554486 ACSF3Q4G176 576 aaPredicted RBP5.56□□□□□ -1.52
SCFD1-212ENST00000554486 TMEM236Q5W0B7 351 aa5.56□□□□□ -1.52
SCFD1-212ENST00000554486 RTL6Q6ICC9 239 aa5.56□□□□□ -1.52
SCFD1-212ENST00000554486 ACSM5Q6NUN0 579 aa5.56□□□□□ -1.52
SCFD1-212ENST00000554486 CLEC9AQ6UXN8 241 aa5.56□□□□□ -1.52
SCFD1-212ENST00000554486 FCRLAQ7L513 359 aa5.56□□□□□ -1.52
SCFD1-212ENST00000554486 FAM122BQ7Z309 247 aa5.56□□□□□ -1.52
SCFD1-212ENST00000554486 DOLPP1Q86YN1 238 aa5.56□□□□□ -1.52
SCFD1-212ENST00000554486 WDFY1Q8IWB7 410 aa5.56□□□□□ -1.52
SCFD1-212ENST00000554486 IQCF1Q8N6M8 205 aa5.56□□□□□ -1.52
SCFD1-212ENST00000554486 ST6GALNAC3Q8NDV1 305 aa5.56□□□□□ -1.52
SCFD1-212ENST00000554486 OR9K2Q8NGE7 335 aa5.56□□□□□ -1.52
SCFD1-212ENST00000554486 OR4Q3Q8NH05 313 aa5.56□□□□□ -1.52
SCFD1-212ENST00000554486 FNDC9Q8TBE3 224 aa5.56□□□□□ -1.52
SCFD1-212ENST00000554486 FAM57AQ8TBR7 257 aa5.56□□□□□ -1.52
SCFD1-212ENST00000554486 ZPLD1Q8TCW7 415 aa5.56□□□□□ -1.52
SCFD1-212ENST00000554486 RNF128Q8TEB7 428 aa5.56□□□□□ -1.52
SCFD1-212ENST00000554486 ABHD3Q8WU67 409 aa5.56□□□□□ -1.52
SCFD1-212ENST00000554486 MUL1Q969V5 352 aa5.56□□□□□ -1.52
SCFD1-212ENST00000554486 CPNE4Q96A23 557 aaPredicted RBP5.56□□□□□ -1.52
SCFD1-212ENST00000554486 ZHX1-C8orf76Q96EF9 292 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms