RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 IL17FQ96PD4 163 aa5.29□□□□□ -1.56
VPS29-210ENST00000552130 MS4A4EQ96PG1 132 aa5.29□□□□□ -1.56
VPS29-210ENST00000552130 ATF6BQ99941 703 aa5.29□□□□□ -1.56
VPS29-210ENST00000552130 NAT10Q9H0A0 1025 aaKnown RBP5.29□□□□□ -1.56
VPS29-210ENST00000552130 ASB7Q9H672 318 aa5.29□□□□□ -1.56
VPS29-210ENST00000552130 TMEM38AQ9H6F2 299 aa5.29□□□□□ -1.56
VPS29-210ENST00000552130 CWH43Q9H720 699 aa5.29□□□□□ -1.56
VPS29-210ENST00000552130 UBE2ZQ9H832 354 aaPredicted RBP5.29□□□□□ -1.56
VPS29-210ENST00000552130 RDH14Q9HBH5 336 aa5.29□□□□□ -1.56
VPS29-210ENST00000552130 KRCC1Q9NPI7 259 aaPredicted RBP5.29□□□□□ -1.56
VPS29-210ENST00000552130 VNN3Q9NY84 501 aa5.29□□□□□ -1.56
VPS29-210ENST00000552130 WRAP73Q9P2S5 460 aaPredicted RBP5.29□□□□□ -1.56
VPS29-210ENST00000552130 MUTYHQ9UIF7 546 aa5.29□□□□□ -1.56
VPS29-210ENST00000552130 SMARCA2P51531 1590 aa5.29□□□□□ -1.56
VPS29-210ENST00000552130 A0A0B4J2E0 115 aa5.28□□□□□ -1.56
VPS29-210ENST00000552130 A0A1B0GX12 115 aa5.28□□□□□ -1.56
VPS29-210ENST00000552130 A0A1W2PR80 420 aa5.28□□□□□ -1.56
VPS29-210ENST00000552130 GLTPD2A6NH11 291 aa5.28□□□□□ -1.56
VPS29-210ENST00000552130 CCL21O00585 134 aa5.28□□□□□ -1.56
VPS29-210ENST00000552130 SHOX2O60902 331 aaPredicted RBP5.28□□□□□ -1.56
VPS29-210ENST00000552130 SNAP29O95721 258 aa5.28□□□□□ -1.56
VPS29-210ENST00000552130 DHFRP00374 187 aa5.28□□□□□ -1.56
VPS29-210ENST00000552130 MELTFP08582 738 aa5.28□□□□□ -1.56
VPS29-210ENST00000552130 IGHV4-30-4P0DP06 118 aa5.28□□□□□ -1.56
VPS29-210ENST00000552130 THRAP10827 490 aa5.28□□□□□ -1.56
VPS29-210ENST00000552130 C4BPBP20851 252 aa5.28□□□□□ -1.56
VPS29-210ENST00000552130 ATP6V1B2P21281 511 aa5.28□□□□□ -1.56
VPS29-210ENST00000552130 DCTP40126 519 aa5.28□□□□□ -1.56
VPS29-210ENST00000552130 MAGEA12P43365 314 aa5.28□□□□□ -1.56
VPS29-210ENST00000552130 TFPI2P48307 235 aa5.28□□□□□ -1.56
VPS29-210ENST00000552130 CYB561P49447 251 aa5.28□□□□□ -1.56
VPS29-210ENST00000552130 SSR4P51571 173 aa5.28□□□□□ -1.56
VPS29-210ENST00000552130 AP2S1P53680 142 aaPredicted RBP5.28□□□□□ -1.56
VPS29-210ENST00000552130 BRWD1-AS2P59051 145 aa5.28□□□□□ -1.56
VPS29-210ENST00000552130 PAFAH1B2P68402 229 aa5.28□□□□□ -1.56
VPS29-210ENST00000552130 HMGCS1Q01581 520 aa5.28□□□□□ -1.56
VPS29-210ENST00000552130 OR10J3Q5JRS4 329 aa5.28□□□□□ -1.56
VPS29-210ENST00000552130 CPTPQ5TA50 214 aa5.28□□□□□ -1.56
VPS29-210ENST00000552130 PVRIGQ6DKI7 326 aa5.28□□□□□ -1.56
VPS29-210ENST00000552130 FAM45BPQ6NSW5 357 aa5.28□□□□□ -1.56
VPS29-210ENST00000552130 FAM199XQ6PEV8 388 aaPredicted RBP5.28□□□□□ -1.56
VPS29-210ENST00000552130 ZNF782Q6ZMW2 699 aaPredicted RBP5.28□□□□□ -1.56
VPS29-210ENST00000552130 TMEM219Q86XT9 240 aa5.28□□□□□ -1.56
VPS29-210ENST00000552130 PDIK1LQ8N165 341 aa5.28□□□□□ -1.56
VPS29-210ENST00000552130 NANOGP1Q8N7R0 232 aa5.28□□□□□ -1.56
VPS29-210ENST00000552130 WDR31Q8NA23 367 aa5.28□□□□□ -1.56
VPS29-210ENST00000552130 OR2T33Q8NG76 320 aa5.28□□□□□ -1.56
VPS29-210ENST00000552130 OR9A4Q8NGU2 314 aa5.28□□□□□ -1.56
VPS29-210ENST00000552130 OR6F1Q8NGZ6 308 aa5.28□□□□□ -1.56
VPS29-210ENST00000552130 OR2V1Q8NHB1 315 aa5.28□□□□□ -1.56
VPS29-210ENST00000552130 ACTRT1Q8TDG2 376 aa5.28□□□□□ -1.56
VPS29-210ENST00000552130 PYROXD1Q8WU10 500 aa5.28□□□□□ -1.56
VPS29-210ENST00000552130 TFB1MQ8WVM0 346 aaKnown RBP5.28□□□□□ -1.56
VPS29-210ENST00000552130 ADTRPQ96IZ2 230 aa5.28□□□□□ -1.56
VPS29-210ENST00000552130 PDLIM2Q96JY6 352 aa5.28□□□□□ -1.56
VPS29-210ENST00000552130 OR8B4Q96RC9 309 aa5.28□□□□□ -1.56
VPS29-210ENST00000552130 TEAD3Q99594 435 aa5.28□□□□□ -1.56
VPS29-210ENST00000552130 NIPSNAP1Q9BPW8 284 aa5.28□□□□□ -1.56
VPS29-210ENST00000552130 UBXN6Q9BZV1 441 aa5.28□□□□□ -1.56
VPS29-210ENST00000552130 FAM107BQ9H098 131 aa5.28□□□□□ -1.56
VPS29-210ENST00000552130 ARL6Q9H0F7 186 aa5.28□□□□□ -1.56
VPS29-210ENST00000552130 ESM1Q9NQ30 184 aa5.28□□□□□ -1.56
VPS29-210ENST00000552130 FOXJ2Q9P0K8 574 aa5.28□□□□□ -1.56
VPS29-210ENST00000552130 PRODH2Q9UF12 536 aa5.28□□□□□ -1.56
VPS29-210ENST00000552130 ERGIC3Q9Y282 383 aa5.28□□□□□ -1.56
VPS29-210ENST00000552130 ARL2BPQ9Y2Y0 163 aa5.28□□□□□ -1.56
VPS29-210ENST00000552130 EIF3AQ14152 1382 aaKnown RBP5.28□□□□□ -1.56
VPS29-210ENST00000552130 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.27□□□□□ -1.57
VPS29-210ENST00000552130 SMIM28A0A1B0GU29 152 aa5.27□□□□□ -1.57
VPS29-210ENST00000552130 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.27□□□□□ -1.57
VPS29-210ENST00000552130 GJE1A6NN92 205 aa5.27□□□□□ -1.57
VPS29-210ENST00000552130 USP27XA6NNY8 438 aa5.27□□□□□ -1.57
VPS29-210ENST00000552130 NEDD8-MDP1E9PL57 170 aa5.27□□□□□ -1.57
VPS29-210ENST00000552130 F5H5T6 163 aa5.27□□□□□ -1.57
VPS29-210ENST00000552130 GLSO94925 669 aaPredicted RBP5.27□□□□□ -1.57
VPS29-210ENST00000552130 CLDN14O95500 239 aa5.27□□□□□ -1.57
VPS29-210ENST00000552130 ISG15P05161 165 aa5.27□□□□□ -1.57
VPS29-210ENST00000552130 C8orf88P0DMB2 117 aa5.27□□□□□ -1.57
VPS29-210ENST00000552130 OR3A2P47893 321 aa5.27□□□□□ -1.57
VPS29-210ENST00000552130 SERPINB8P50452 374 aa5.27□□□□□ -1.57
VPS29-210ENST00000552130 OR4D2P58180 307 aa5.27□□□□□ -1.57
VPS29-210ENST00000552130 OR10A3P58181 314 aa5.27□□□□□ -1.57
VPS29-210ENST00000552130 HERV-K104P61576 105 aa5.27□□□□□ -1.57
VPS29-210ENST00000552130 FAM3AP98173 230 aa5.27□□□□□ -1.57
VPS29-210ENST00000552130 ZNF155Q12901 538 aaPredicted RBP5.27□□□□□ -1.57
VPS29-210ENST00000552130 DLG1Q12959 904 aa5.27□□□□□ -1.57
VPS29-210ENST00000552130 SLC39A6Q13433 755 aa5.27□□□□□ -1.57
VPS29-210ENST00000552130 TMEM187Q14656 261 aa5.27□□□□□ -1.57
VPS29-210ENST00000552130 CCDC6Q16204 474 aa5.27□□□□□ -1.57
VPS29-210ENST00000552130 ZNF658BQ4V348 819 aaPredicted RBP5.27□□□□□ -1.57
VPS29-210ENST00000552130 PWWP2BQ6NUJ5 590 aa5.27□□□□□ -1.57
VPS29-210ENST00000552130 TMEM207Q6UWW9 146 aa5.27□□□□□ -1.57
VPS29-210ENST00000552130 Q6ZT83 130 aa5.27□□□□□ -1.57
VPS29-210ENST00000552130 FAM92BQ6ZTR7 304 aa5.27□□□□□ -1.57
VPS29-210ENST00000552130 CEACAM19Q7Z692 300 aa5.27□□□□□ -1.57
VPS29-210ENST00000552130 MYPOPQ86VE0 399 aaPredicted RBP5.27□□□□□ -1.57
VPS29-210ENST00000552130 PLA2G4DQ86XP0 818 aa5.27□□□□□ -1.57
VPS29-210ENST00000552130 PUSL1Q8N0Z8 303 aaKnown RBP5.27□□□□□ -1.57
VPS29-210ENST00000552130 FBXL14Q8N1E6 418 aa5.27□□□□□ -1.57
VPS29-210ENST00000552130 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms