RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 YIPF5Q969M3 257 aa13.98□□□□□ -0.17
VPS29-207ENST00000549970 ELAC2Q9BQ52 826 aaKnown RBP13.98□□□□□ -0.17
VPS29-207ENST00000549970 NARFLQ9H6Q4 476 aa13.98□□□□□ -0.17
VPS29-207ENST00000549970 GPR160Q9UJ42 338 aa13.98□□□□□ -0.17
VPS29-207ENST00000549970 A0A1W2PPL8 197 aa13.97□□□□□ -0.17
VPS29-207ENST00000549970 H7C1C5 153 aa13.97□□□□□ -0.17
VPS29-207ENST00000549970 NDUFAB1O14561 156 aa13.97□□□□□ -0.17
VPS29-207ENST00000549970 LAP3P28838 519 aa13.97□□□□□ -0.17
VPS29-207ENST00000549970 RPL4P36578 427 aaKnown RBP13.97□□□□□ -0.17
VPS29-207ENST00000549970 PSME3P61289 254 aa13.97□□□□□ -0.17
VPS29-207ENST00000549970 LCN6P62502 163 aa13.97□□□□□ -0.17
VPS29-207ENST00000549970 PSG4Q00888 419 aa13.97□□□□□ -0.17
VPS29-207ENST00000549970 GLO1Q04760 184 aa13.97□□□□□ -0.17
VPS29-207ENST00000549970 FHL1Q13642 323 aa13.97□□□□□ -0.17
VPS29-207ENST00000549970 FAM27BQ5VT28 67 aa13.97□□□□□ -0.17
VPS29-207ENST00000549970 FAM205BPQ63HN1 556 aa13.97□□□□□ -0.17
VPS29-207ENST00000549970 TMEM154Q6P9G4 183 aa13.97□□□□□ -0.17
VPS29-207ENST00000549970 CYP4Z1Q86W10 505 aa13.97□□□□□ -0.17
VPS29-207ENST00000549970 PHC2Q8IXK0 858 aa13.97□□□□□ -0.17
VPS29-207ENST00000549970 RNF113BQ8IZP6 322 aaKnown RBP13.97□□□□□ -0.17
VPS29-207ENST00000549970 LINC01356Q8N9X3 169 aa13.97□□□□□ -0.17
VPS29-207ENST00000549970 FNDC8Q8TC99 324 aa13.97□□□□□ -0.17
VPS29-207ENST00000549970 TMEM158Q8WZ71 300 aa13.97□□□□□ -0.17
VPS29-207ENST00000549970 FAM107BQ9H098 131 aa13.97□□□□□ -0.17
VPS29-207ENST00000549970 HINT3Q9NQE9 182 aaKnown RBP13.97□□□□□ -0.17
VPS29-207ENST00000549970 ZNF275Q9NSD4 429 aaPredicted RBP13.97□□□□□ -0.17
VPS29-207ENST00000549970 SLCO1C1Q9NYB5 712 aa13.97□□□□□ -0.17
VPS29-207ENST00000549970 EGFL7Q9UHF1 273 aa13.97□□□□□ -0.17
VPS29-207ENST00000549970 ENPP4Q9Y6X5 453 aa13.97□□□□□ -0.17
VPS29-207ENST00000549970 C5orf49A4QMS7 147 aa13.96□□□□□ -0.17
VPS29-207ENST00000549970 A6NIZ1 184 aa13.96□□□□□ -0.17
VPS29-207ENST00000549970 C17orf100A8MU93 164 aa13.96□□□□□ -0.17
VPS29-207ENST00000549970 CDC42EP2O14613 210 aa13.96□□□□□ -0.17
VPS29-207ENST00000549970 PPIHO43447 177 aaKnown RBP13.96□□□□□ -0.17
VPS29-207ENST00000549970 DRD4P21917 467 aa13.96□□□□□ -0.17
VPS29-207ENST00000549970 GUCA1AP43080 201 aaPredicted RBP13.96□□□□□ -0.17
VPS29-207ENST00000549970 GDI2P50395 445 aaKnown RBP13.96□□□□□ -0.17
VPS29-207ENST00000549970 CDH15P55291 814 aa13.96□□□□□ -0.17
VPS29-207ENST00000549970 RAP1BP61224 184 aa13.96□□□□□ -0.17
VPS29-207ENST00000549970 RAP1AP62834 184 aa13.96□□□□□ -0.17
VPS29-207ENST00000549970 CCL8P80075 99 aa13.96□□□□□ -0.17
VPS29-207ENST00000549970 ANKDD1AQ495B1 522 aa13.96□□□□□ -0.17
VPS29-207ENST00000549970 SPATA46Q5T0L3 261 aa13.96□□□□□ -0.17
VPS29-207ENST00000549970 RRM2BQ7LG56 351 aa13.96□□□□□ -0.17
VPS29-207ENST00000549970 TSEN54Q7Z6J9 526 aaKnown RBP13.96□□□□□ -0.17
VPS29-207ENST00000549970 ZNF101Q8IZC7 436 aa13.96□□□□□ -0.17
VPS29-207ENST00000549970 GTF3AQ92664 365 aaKnown RBP13.96□□□□□ -0.17
VPS29-207ENST00000549970 CMTM5Q96DZ9 223 aa13.96□□□□□ -0.17
VPS29-207ENST00000549970 POM121L2Q96KW2 1035 aa13.96□□□□□ -0.17
VPS29-207ENST00000549970 OR2H1Q9GZK4 316 aa13.96□□□□□ -0.17
VPS29-207ENST00000549970 WNT5BQ9H1J7 359 aa13.96□□□□□ -0.17
VPS29-207ENST00000549970 MYLK2Q9H1R3 596 aa13.96□□□□□ -0.17
VPS29-207ENST00000549970 NMNAT1Q9HAN9 279 aaPredicted RBP13.96□□□□□ -0.17
VPS29-207ENST00000549970 ABCD2Q9UBJ2 740 aa13.96□□□□□ -0.17
VPS29-207ENST00000549970 EIF3KQ9UBQ5 218 aaKnown RBP13.96□□□□□ -0.17
VPS29-207ENST00000549970 ADAM18Q9Y3Q7 739 aa13.96□□□□□ -0.17
VPS29-207ENST00000549970 LOC100509620A0A075B734 347 aa13.95□□□□□ -0.18
VPS29-207ENST00000549970 CDC14BO60729 498 aa13.95□□□□□ -0.18
VPS29-207ENST00000549970 CST2P09228 141 aa13.95□□□□□ -0.18
VPS29-207ENST00000549970 WNT5AP41221 380 aa13.95□□□□□ -0.18
VPS29-207ENST00000549970 ZBED5Q49AG3 693 aa13.95□□□□□ -0.18
VPS29-207ENST00000549970 GLYATQ6IB77 296 aa13.95□□□□□ -0.18
VPS29-207ENST00000549970 TMPRSS11FQ6ZWK6 438 aa13.95□□□□□ -0.18
VPS29-207ENST00000549970 CLDND2Q8NHS1 167 aa13.95□□□□□ -0.18
VPS29-207ENST00000549970 SLC7A13Q8TCU3 470 aa13.95□□□□□ -0.18
VPS29-207ENST00000549970 FAM46AQ96IP4 442 aaKnown RBP13.95□□□□□ -0.18
VPS29-207ENST00000549970 Q96M85 177 aa13.95□□□□□ -0.18
VPS29-207ENST00000549970 SPAG4Q9NPE6 437 aa13.95□□□□□ -0.18
VPS29-207ENST00000549970 ADA2Q9NZK5 511 aa13.95□□□□□ -0.18
VPS29-207ENST00000549970 GRHPRQ9UBQ7 328 aa13.95□□□□□ -0.18
VPS29-207ENST00000549970 RPS6KA6Q9UK32 745 aa13.95□□□□□ -0.18
VPS29-207ENST00000549970 XKRYO14609 159 aa13.94□□□□□ -0.18
VPS29-207ENST00000549970 WNT9BO14905 357 aa13.94□□□□□ -0.18
VPS29-207ENST00000549970 TPD52L2O43399 206 aaKnown RBP13.94□□□□□ -0.18
VPS29-207ENST00000549970 RP2O75695 350 aa13.94□□□□□ -0.18
VPS29-207ENST00000549970 H1F0P07305 194 aaKnown RBP13.94□□□□□ -0.18
VPS29-207ENST00000549970 CD14P08571 375 aa13.94□□□□□ -0.18
VPS29-207ENST00000549970 ZNF26P17031 533 aaPredicted RBP13.94□□□□□ -0.18
VPS29-207ENST00000549970 MSR1P21757 451 aa13.94□□□□□ -0.18
VPS29-207ENST00000549970 GCH1P30793 250 aa13.94□□□□□ -0.18
VPS29-207ENST00000549970 MPV17P39210 176 aa13.94□□□□□ -0.18
VPS29-207ENST00000549970 TMEM33P57088 247 aa13.94□□□□□ -0.18
VPS29-207ENST00000549970 PCBD1P61457 104 aa13.94□□□□□ -0.18
VPS29-207ENST00000549970 MRPS11P82912 194 aaKnown RBP13.94□□□□□ -0.18
VPS29-207ENST00000549970 PCGF3Q3KNV8 242 aa13.94□□□□□ -0.18
VPS29-207ENST00000549970 MESTQ5EB52 335 aa13.94□□□□□ -0.18
VPS29-207ENST00000549970 FGD3Q5JSP0 725 aa13.94□□□□□ -0.18
VPS29-207ENST00000549970 ZNF774Q6NX45 483 aa13.94□□□□□ -0.18
VPS29-207ENST00000549970 UGT2A3Q6UWM9 527 aa13.94□□□□□ -0.18
VPS29-207ENST00000549970 FOXL2NBQ6ZUU3 175 aa13.94□□□□□ -0.18
VPS29-207ENST00000549970 RFPL4BQ6ZWI9 263 aa13.94□□□□□ -0.18
VPS29-207ENST00000549970 ALDH16A1Q8IZ83 802 aa13.94□□□□□ -0.18
VPS29-207ENST00000549970 RNF148Q8N7C7 305 aa13.94□□□□□ -0.18
VPS29-207ENST00000549970 ABHD4Q8TB40 342 aa13.94□□□□□ -0.18
VPS29-207ENST00000549970 SLC25A40Q8TBP6 338 aa13.94□□□□□ -0.18
VPS29-207ENST00000549970 IPCEF1Q8WWN9 437 aaPredicted RBP13.94□□□□□ -0.18
VPS29-207ENST00000549970 ZNF570Q96NI8 536 aa13.94□□□□□ -0.18
VPS29-207ENST00000549970 REPIN1Q9BWE0 567 aaKnown RBP13.94□□□□□ -0.18
VPS29-207ENST00000549970 ZNF416Q9BWM5 594 aa13.94□□□□□ -0.18
VPS29-207ENST00000549970 ANKRD19PQ9H560 264 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms