RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 ELP5Q8TE02 316 aa13.28□□□□□ -0.28
HOXC11-202ENST00000546378 MRPS24Q96EL2 167 aaKnown RBP13.28□□□□□ -0.28
HOXC11-202ENST00000546378 UBL7Q96S82 380 aaPredicted RBP13.28□□□□□ -0.28
HOXC11-202ENST00000546378 BANF2Q9H503 90 aa13.28□□□□□ -0.28
HOXC11-202ENST00000546378 ADAM29Q9UKF5 820 aa13.28□□□□□ -0.28
HOXC11-202ENST00000546378 ASPMQ8IZT6 3477 aa13.27□□□□□ -0.28
HOXC11-202ENST00000546378 A0A087WV62 115 aa13.27□□□□□ -0.28
HOXC11-202ENST00000546378 A0A0B4J2E0 115 aa13.27□□□□□ -0.28
HOXC11-202ENST00000546378 A0A1B0GX12 115 aa13.27□□□□□ -0.28
HOXC11-202ENST00000546378 OR5K3A6NET4 321 aa13.27□□□□□ -0.28
HOXC11-202ENST00000546378 OR6C76A6NM76 312 aa13.27□□□□□ -0.28
HOXC11-202ENST00000546378 SULT1C2O00338 296 aa13.27□□□□□ -0.28
HOXC11-202ENST00000546378 NDUFB6O95139 128 aa13.27□□□□□ -0.28
HOXC11-202ENST00000546378 ADH1BP00325 375 aa13.27□□□□□ -0.28
HOXC11-202ENST00000546378 JMJD7P0C870 316 aa13.27□□□□□ -0.28
HOXC11-202ENST00000546378 BDKRB2P30411 391 aa13.27□□□□□ -0.28
HOXC11-202ENST00000546378 DIO1P49895 249 aa13.27□□□□□ -0.28
HOXC11-202ENST00000546378 NPY4RP50391 375 aa13.27□□□□□ -0.28
HOXC11-202ENST00000546378 PSG6Q00889 435 aa13.27□□□□□ -0.28
HOXC11-202ENST00000546378 RAB11BQ15907 218 aa13.27□□□□□ -0.28
HOXC11-202ENST00000546378 BHLHE23Q8NDY6 225 aa13.27□□□□□ -0.28
HOXC11-202ENST00000546378 NANPQ8TBE9 248 aa13.27□□□□□ -0.28
HOXC11-202ENST00000546378 ZNF775Q96BV0 537 aaPredicted RBP13.27□□□□□ -0.28
HOXC11-202ENST00000546378 HDAC8Q9BY41 377 aa13.27□□□□□ -0.28
HOXC11-202ENST00000546378 Q9N2J8 555 aa13.27□□□□□ -0.28
HOXC11-202ENST00000546378 DHDHQ9UQ10 334 aa13.27□□□□□ -0.28
HOXC11-202ENST00000546378 TMED7Q9Y3B3 224 aa13.27□□□□□ -0.28
HOXC11-202ENST00000546378 NCOR1O75376 2440 aa13.27□□□□□ -0.29
HOXC11-202ENST00000546378 TRBV23-1A0A0A0MS06 115 aa13.27□□□□□ -0.29
HOXC11-202ENST00000546378 IGHV3-20A0A0C4DH32 117 aa13.27□□□□□ -0.29
HOXC11-202ENST00000546378 CXorf51AA0A1B0GTR3 108 aa13.27□□□□□ -0.29
HOXC11-202ENST00000546378 ZNF736B4DX44 427 aaPredicted RBP13.27□□□□□ -0.29
HOXC11-202ENST00000546378 P2RY10O00398 339 aa13.27□□□□□ -0.29
HOXC11-202ENST00000546378 ZNHIT1O43257 154 aa13.27□□□□□ -0.29
HOXC11-202ENST00000546378 GIPP09681 153 aaPredicted RBP13.27□□□□□ -0.29
HOXC11-202ENST00000546378 NAT2P11245 290 aa13.27□□□□□ -0.29
HOXC11-202ENST00000546378 WDR38Q5JTN6 314 aa13.27□□□□□ -0.29
HOXC11-202ENST00000546378 KRBOX4Q5JUW0 171 aa13.27□□□□□ -0.29
HOXC11-202ENST00000546378 MANEAQ5SRI9 462 aa13.27□□□□□ -0.29
HOXC11-202ENST00000546378 ULK3Q6PHR2 472 aa13.27□□□□□ -0.29
HOXC11-202ENST00000546378 MED25Q71SY5 747 aa13.27□□□□□ -0.29
HOXC11-202ENST00000546378 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.27□□□□□ -0.29
HOXC11-202ENST00000546378 OR2L13Q8N349 312 aa13.27□□□□□ -0.29
HOXC11-202ENST00000546378 GTPBP8Q8N3Z3 284 aaPredicted RBP13.27□□□□□ -0.29
HOXC11-202ENST00000546378 FAM160A2Q8N612 972 aaPredicted RBP13.27□□□□□ -0.29
HOXC11-202ENST00000546378 RAB7BQ96AH8 199 aa13.27□□□□□ -0.29
HOXC11-202ENST00000546378 ZBTB8AQ96BR9 441 aa13.27□□□□□ -0.29
HOXC11-202ENST00000546378 TMEM41AQ96HV5 264 aa13.27□□□□□ -0.29
HOXC11-202ENST00000546378 LINC00615Q96LM1 132 aaPredicted RBP13.27□□□□□ -0.29
HOXC11-202ENST00000546378 DGAT2Q96PD7 388 aa13.27□□□□□ -0.29
HOXC11-202ENST00000546378 UBE2ZQ9H832 354 aaPredicted RBP13.27□□□□□ -0.29
HOXC11-202ENST00000546378 CYP8B1Q9UNU6 501 aa13.27□□□□□ -0.29
HOXC11-202ENST00000546378 C19orf53Q9UNZ5 99 aaPredicted RBP13.27□□□□□ -0.29
HOXC11-202ENST00000546378 LOC101059948A0A1B0GTJ6 334 aa13.26□□□□□ -0.29
HOXC11-202ENST00000546378 ANKRD20A5PA0PJZ0 165 aa13.26□□□□□ -0.29
HOXC11-202ENST00000546378 GGT3PA6NGU5 568 aa13.26□□□□□ -0.29
HOXC11-202ENST00000546378 TACSTD2P09758 323 aa13.26□□□□□ -0.29
HOXC11-202ENST00000546378 AKAIN1P0CW23 69 aa13.26□□□□□ -0.29
HOXC11-202ENST00000546378 GNB3P16520 340 aa13.26□□□□□ -0.29
HOXC11-202ENST00000546378 TACR3P29371 465 aa13.26□□□□□ -0.29
HOXC11-202ENST00000546378 DPTQ07507 201 aa13.26□□□□□ -0.29
HOXC11-202ENST00000546378 PDSS1Q5T2R2 415 aa13.26□□□□□ -0.29
HOXC11-202ENST00000546378 H3F3CQ6NXT2 135 aa13.26□□□□□ -0.29
HOXC11-202ENST00000546378 CDH26Q8IXH8 852 aa13.26□□□□□ -0.29
HOXC11-202ENST00000546378 POMGNT2Q8NAT1 580 aa13.26□□□□□ -0.29
HOXC11-202ENST00000546378 CAMKVQ8NCB2 501 aa13.26□□□□□ -0.29
HOXC11-202ENST00000546378 ISOC2Q96AB3 205 aa13.26□□□□□ -0.29
HOXC11-202ENST00000546378 COX14Q96I36 57 aa13.26□□□□□ -0.29
HOXC11-202ENST00000546378 MRGPRX1Q96LB2 322 aa13.26□□□□□ -0.29
HOXC11-202ENST00000546378 GPER1Q99527 375 aa13.26□□□□□ -0.29
HOXC11-202ENST00000546378 REG4Q9BYZ8 158 aa13.26□□□□□ -0.29
HOXC11-202ENST00000546378 METTL8Q9H825 291 aaKnown RBP13.26□□□□□ -0.29
HOXC11-202ENST00000546378 CHMP1AQ9HD42 196 aaPredicted RBP13.26□□□□□ -0.29
HOXC11-202ENST00000546378 DHCR7Q9UBM7 475 aaKnown RBP13.26□□□□□ -0.29
HOXC11-202ENST00000546378 FANCMQ8IYD8 2048 aa13.26□□□□□ -0.29
HOXC11-202ENST00000546378 TPRP12270 2363 aaKnown RBP13.26□□□□□ -0.29
HOXC11-202ENST00000546378 A0A1W2PQF6 199 aa13.26□□□□□ -0.29
HOXC11-202ENST00000546378 CPED1A4D0V7 1026 aa13.26□□□□□ -0.29
HOXC11-202ENST00000546378 URADA6NGE7 173 aa13.26□□□□□ -0.29
HOXC11-202ENST00000546378 OR2T1O43869 369 aa13.26□□□□□ -0.29
HOXC11-202ENST00000546378 ADAP1O75689 374 aa13.26□□□□□ -0.29
HOXC11-202ENST00000546378 ASCL1P50553 236 aa13.26□□□□□ -0.29
HOXC11-202ENST00000546378 ZP2Q05996 745 aa13.26□□□□□ -0.29
HOXC11-202ENST00000546378 RPL18Q07020 188 aaKnown RBP13.26□□□□□ -0.29
HOXC11-202ENST00000546378 DYRK1AQ13627 763 aa13.26□□□□□ -0.29
HOXC11-202ENST00000546378 ZIC1Q15915 447 aa13.26□□□□□ -0.29
HOXC11-202ENST00000546378 TMEM52BQ4KMG9 183 aa13.26□□□□□ -0.29
HOXC11-202ENST00000546378 OR2G2Q8NGZ5 317 aa13.26□□□□□ -0.29
HOXC11-202ENST00000546378 ADAMTS18Q8TE60 1221 aa13.26□□□□□ -0.29
HOXC11-202ENST00000546378 TTC9Q92623 222 aa13.26□□□□□ -0.29
HOXC11-202ENST00000546378 HGDQ93099 445 aa13.26□□□□□ -0.29
HOXC11-202ENST00000546378 DNAJB12Q9NXW2 375 aaKnown RBP13.26□□□□□ -0.29
HOXC11-202ENST00000546378 FBXL21Q9UKT6 434 aa13.26□□□□□ -0.29
HOXC11-202ENST00000546378 SPTBN2O15020 2390 aa13.26□□□□□ -0.29
HOXC11-202ENST00000546378 J3QRE1 110 aa13.26□□□□□ -0.29
HOXC11-202ENST00000546378 ZNF10P21506 573 aaPredicted RBP13.26□□□□□ -0.29
HOXC11-202ENST00000546378 ARFIP1P53367 373 aa13.26□□□□□ -0.29
HOXC11-202ENST00000546378 RPS15AP62244 130 aaKnown RBP13.26□□□□□ -0.29
HOXC11-202ENST00000546378 RPS21P63220 83 aaKnown RBP13.26□□□□□ -0.29
HOXC11-202ENST00000546378 HNF4GQ14541 408 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms