RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 CHCHD10Q8WYQ3 142 aaPredicted RBP2.39□□□□□ -2.03
SNHG1-224ENST00000545688 RAB7BQ96AH8 199 aa2.39□□□□□ -2.03
SNHG1-224ENST00000545688 DNAJC19Q96DA6 116 aa2.39□□□□□ -2.03
SNHG1-224ENST00000545688 SDSLQ96GA7 329 aa2.39□□□□□ -2.03
SNHG1-224ENST00000545688 ANKRD36BP1Q96IX9 119 aa2.39□□□□□ -2.03
SNHG1-224ENST00000545688 MS4A14Q96JA4 679 aa2.39□□□□□ -2.03
SNHG1-224ENST00000545688 CALN1Q9BXU9 219 aa2.39□□□□□ -2.03
SNHG1-224ENST00000545688 DUSP16Q9BY84 665 aa2.39□□□□□ -2.03
SNHG1-224ENST00000545688 SMYD3Q9H7B4 428 aa2.39□□□□□ -2.03
SNHG1-224ENST00000545688 SPASTQ9UBP0 616 aa2.39□□□□□ -2.03
SNHG1-224ENST00000545688 ZNF835Q9Y2P0 537 aa2.39□□□□□ -2.03
SNHG1-224ENST00000545688 MN1Q10571 1320 aaPredicted RBP2.39□□□□□ -2.03
SNHG1-224ENST00000545688 TCHHQ07283 1943 aa2.38□□□□□ -2.03
SNHG1-224ENST00000545688 PIKFYVEQ9Y2I7 2098 aa2.38□□□□□ -2.03
SNHG1-224ENST00000545688 GOLGA6L7A0A1B0GV03 622 aa2.38□□□□□ -2.03
SNHG1-224ENST00000545688 A0A1B0GWB2 263 aa2.38□□□□□ -2.03
SNHG1-224ENST00000545688 GOLGA8IPA6NC78 632 aa2.38□□□□□ -2.03
SNHG1-224ENST00000545688 ZNF233A6NK53 670 aa2.38□□□□□ -2.03
SNHG1-224ENST00000545688 GOLGA8JA6NMD2 632 aa2.38□□□□□ -2.03
SNHG1-224ENST00000545688 WASHC1A8K0Z3 465 aa2.38□□□□□ -2.03
SNHG1-224ENST00000545688 C11orf94C9JXX5 98 aa2.38□□□□□ -2.03
SNHG1-224ENST00000545688 MKRN2OSH3BPM6 223 aa2.38□□□□□ -2.03
SNHG1-224ENST00000545688 THRAP10827 490 aa2.38□□□□□ -2.03
SNHG1-224ENST00000545688 ANXA3P12429 323 aa2.38□□□□□ -2.03
SNHG1-224ENST00000545688 CD1CP29017 333 aa2.38□□□□□ -2.03
SNHG1-224ENST00000545688 OTX2P32243 289 aa2.38□□□□□ -2.03
SNHG1-224ENST00000545688 TFPI2P48307 235 aa2.38□□□□□ -2.03
SNHG1-224ENST00000545688 YWHAGP61981 247 aaKnown RBP eCLIP2.38□□□□□ -2.03
SNHG1-224ENST00000545688 RPS24P62847 133 aaKnown RBP2.38□□□□□ -2.03
SNHG1-224ENST00000545688 RPS21P63220 83 aaKnown RBP2.38□□□□□ -2.03
SNHG1-224ENST00000545688 KCTD16Q68DU8 428 aa2.38□□□□□ -2.03
SNHG1-224ENST00000545688 ACOT1Q86TX2 421 aa2.38□□□□□ -2.03
SNHG1-224ENST00000545688 ARHGAP18Q8N392 663 aa2.38□□□□□ -2.03
SNHG1-224ENST00000545688 OR4D9Q8NGE8 314 aa2.38□□□□□ -2.03
SNHG1-224ENST00000545688 OR52K2Q8NGK3 314 aa2.38□□□□□ -2.03
SNHG1-224ENST00000545688 M1APQ8TC57 530 aa2.38□□□□□ -2.03
SNHG1-224ENST00000545688 STARD8Q92502 1023 aa2.38□□□□□ -2.03
SNHG1-224ENST00000545688 KLK6Q92876 244 aa2.38□□□□□ -2.03
SNHG1-224ENST00000545688 C19orf60Q96EN9 201 aa2.38□□□□□ -2.03
SNHG1-224ENST00000545688 C14orf79Q96F83 325 aa2.38□□□□□ -2.03
SNHG1-224ENST00000545688 CELF6Q96J87 481 aaKnown RBP2.38□□□□□ -2.03
SNHG1-224ENST00000545688 NRIP2Q9BQI9 281 aa2.38□□□□□ -2.03
SNHG1-224ENST00000545688 RAB34Q9BZG1 259 aa2.38□□□□□ -2.03
SNHG1-224ENST00000545688 SLC25A22Q9H936 323 aa2.38□□□□□ -2.03
SNHG1-224ENST00000545688 FBXO8Q9NRD0 319 aa2.38□□□□□ -2.03
SNHG1-224ENST00000545688 IL20RAQ9UHF4 553 aa2.38□□□□□ -2.03
SNHG1-224ENST00000545688 NUFIP1Q9UHK0 495 aaKnown RBP2.38□□□□□ -2.03
SNHG1-224ENST00000545688 DNPEPQ9ULA0 475 aa2.38□□□□□ -2.03
SNHG1-224ENST00000545688 HS3ST2Q9Y278 367 aa2.38□□□□□ -2.03
SNHG1-224ENST00000545688 FADS3Q9Y5Q0 445 aa2.38□□□□□ -2.03
SNHG1-224ENST00000545688 ATP8B3O60423 1300 aa2.38□□□□□ -2.03
SNHG1-224ENST00000545688 AKAP6Q13023 2319 aa2.37□□□□□ -2.03
SNHG1-224ENST00000545688 CNTRLQ7Z7A1 2325 aa2.37□□□□□ -2.03
SNHG1-224ENST00000545688 TRPM6Q9BX84 2022 aa2.37□□□□□ -2.03
SNHG1-224ENST00000545688 ZNF106Q9H2Y7 1883 aaKnown RBP2.37□□□□□ -2.03
SNHG1-224ENST00000545688 NUP214P35658 2090 aaPredicted RBP2.37□□□□□ -2.03
SNHG1-224ENST00000545688 A0A0G2JRQ6 117 aa2.37□□□□□ -2.03
SNHG1-224ENST00000545688 KIAA0754O94854 1291 aa2.37□□□□□ -2.03
SNHG1-224ENST00000545688 MOSP00540 346 aa2.37□□□□□ -2.03
SNHG1-224ENST00000545688 ASS1P00966 412 aaKnown RBP2.37□□□□□ -2.03
SNHG1-224ENST00000545688 IGLV3-25P01717 112 aa2.37□□□□□ -2.03
SNHG1-224ENST00000545688 TNNC2P02585 160 aa2.37□□□□□ -2.03
SNHG1-224ENST00000545688 GAP43P17677 238 aa2.37□□□□□ -2.03
SNHG1-224ENST00000545688 TCN2P20062 427 aa2.37□□□□□ -2.03
SNHG1-224ENST00000545688 SNRPFP62306 86 aaKnown RBP2.37□□□□□ -2.03
SNHG1-224ENST00000545688 TNNC1P63316 161 aa2.37□□□□□ -2.03
SNHG1-224ENST00000545688 ARF5P84085 180 aa2.37□□□□□ -2.03
SNHG1-224ENST00000545688 CYP24A1Q07973 514 aa2.37□□□□□ -2.03
SNHG1-224ENST00000545688 RGS1Q08116 209 aa2.37□□□□□ -2.03
SNHG1-224ENST00000545688 FUT7Q11130 342 aa2.37□□□□□ -2.03
SNHG1-224ENST00000545688 SNX1Q13596 522 aa2.37□□□□□ -2.03
SNHG1-224ENST00000545688 ZNF235Q14590 738 aa2.37□□□□□ -2.03
SNHG1-224ENST00000545688 ELOCQ15369 112 aa2.37□□□□□ -2.03
SNHG1-224ENST00000545688 SNRNP35Q16560 246 aaKnown RBP2.37□□□□□ -2.03
SNHG1-224ENST00000545688 C1orf220Q5T0J3 134 aa2.37□□□□□ -2.03
SNHG1-224ENST00000545688 KPRPQ5T749 579 aaPredicted RBP2.37□□□□□ -2.03
SNHG1-224ENST00000545688 LIPNQ5VXI9 398 aa2.37□□□□□ -2.03
SNHG1-224ENST00000545688 LANCL3Q6ZV70 420 aa2.37□□□□□ -2.03
SNHG1-224ENST00000545688 CCDC91Q7Z6B0 441 aa2.37□□□□□ -2.03
SNHG1-224ENST00000545688 TMEM135Q86UB9 458 aa2.37□□□□□ -2.03
SNHG1-224ENST00000545688 C12orf56Q8IXR9 622 aa2.37□□□□□ -2.03
SNHG1-224ENST00000545688 PNKDQ8N490 385 aa2.37□□□□□ -2.03
SNHG1-224ENST00000545688 NECAB1Q8N987 351 aa2.37□□□□□ -2.03
SNHG1-224ENST00000545688 CCNYQ8ND76 341 aa2.37□□□□□ -2.03
SNHG1-224ENST00000545688 ITLN2Q8WWU7 325 aaPredicted RBP2.37□□□□□ -2.03
SNHG1-224ENST00000545688 OR8D1Q8WZ84 308 aa2.37□□□□□ -2.03
SNHG1-224ENST00000545688 NDRG1Q92597 394 aaKnown RBP2.37□□□□□ -2.03
SNHG1-224ENST00000545688 SYAP1Q96A49 352 aaPredicted RBP2.37□□□□□ -2.03
SNHG1-224ENST00000545688 PLIN2Q99541 437 aa2.37□□□□□ -2.03
SNHG1-224ENST00000545688 CITED1Q99966 193 aa2.37□□□□□ -2.03
SNHG1-224ENST00000545688 ING2Q9H160 280 aa2.37□□□□□ -2.03
SNHG1-224ENST00000545688 TPK1Q9H3S4 243 aa2.37□□□□□ -2.03
SNHG1-224ENST00000545688 RDH14Q9HBH5 336 aa2.37□□□□□ -2.03
SNHG1-224ENST00000545688 EML4Q9HC35 981 aaKnown RBP2.37□□□□□ -2.03
SNHG1-224ENST00000545688 MRPL40Q9NQ50 206 aaKnown RBP2.37□□□□□ -2.03
SNHG1-224ENST00000545688 FAM49BQ9NUQ9 324 aa2.37□□□□□ -2.03
SNHG1-224ENST00000545688 ASF1BQ9NVP2 202 aa2.37□□□□□ -2.03
SNHG1-224ENST00000545688 B3GNT2Q9NY97 397 aa2.37□□□□□ -2.03
SNHG1-224ENST00000545688 MRPS18BQ9Y676 258 aaKnown RBP2.37□□□□□ -2.03
SNHG1-224ENST00000545688 SEC16AO15027 2179 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms