RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 PABPC1L2AQ5JQF8 200 aa13.57□□□□□ -0.24
CCDC78-216ENST00000544996 C1orf94Q6P1W5 598 aa13.57□□□□□ -0.24
CCDC78-216ENST00000544996 DNM1P46Q6ZS02 220 aa13.57□□□□□ -0.24
CCDC78-216ENST00000544996 SVOPLQ8N434 492 aa13.57□□□□□ -0.24
CCDC78-216ENST00000544996 MRPL24Q96A35 216 aaKnown RBP13.57□□□□□ -0.24
CCDC78-216ENST00000544996 RASD2Q96D21 266 aa13.57□□□□□ -0.24
CCDC78-216ENST00000544996 ERMAPQ96PL5 475 aaPredicted RBP13.57□□□□□ -0.24
CCDC78-216ENST00000544996 DOK1Q99704 481 aa13.57□□□□□ -0.24
CCDC78-216ENST00000544996 REG4Q9BYZ8 158 aa13.57□□□□□ -0.24
CCDC78-216ENST00000544996 OR52D1Q9H346 318 aa13.57□□□□□ -0.24
CCDC78-216ENST00000544996 DYNLRB1Q9NP97 96 aa13.57□□□□□ -0.24
CCDC78-216ENST00000544996 TIMM10BQ9Y5J6 103 aa13.57□□□□□ -0.24
CCDC78-216ENST00000544996 LYVE1Q9Y5Y7 322 aa13.57□□□□□ -0.24
CCDC78-216ENST00000544996 C12orf71A8MTZ7 269 aa13.56□□□□□ -0.24
CCDC78-216ENST00000544996 IMPA2O14732 288 aa13.56□□□□□ -0.24
CCDC78-216ENST00000544996 GPRIN2O60269 458 aa13.56□□□□□ -0.24
CCDC78-216ENST00000544996 TXNDC12O95881 172 aa13.56□□□□□ -0.24
CCDC78-216ENST00000544996 RAP2AP10114 183 aa13.56□□□□□ -0.24
CCDC78-216ENST00000544996 CCL2P13500 99 aa13.56□□□□□ -0.24
CCDC78-216ENST00000544996 STOMP27105 288 aa13.56□□□□□ -0.24
CCDC78-216ENST00000544996 NOS3P29474 1203 aa13.56□□□□□ -0.24
CCDC78-216ENST00000544996 RAD52P43351 418 aa13.56□□□□□ -0.24
CCDC78-216ENST00000544996 GSSP48637 474 aa13.56□□□□□ -0.24
CCDC78-216ENST00000544996 EVX1P49640 407 aa13.56□□□□□ -0.24
CCDC78-216ENST00000544996 FXYD6P3P58550 94 aa13.56□□□□□ -0.24
CCDC78-216ENST00000544996 SELENOVP59797 346 aa13.56□□□□□ -0.24
CCDC78-216ENST00000544996 TSPAN31Q12999 210 aa13.56□□□□□ -0.24
CCDC78-216ENST00000544996 PGBD2Q6P3X8 592 aa13.56□□□□□ -0.24
CCDC78-216ENST00000544996 FOXL2NBQ6ZUU3 175 aa13.56□□□□□ -0.24
CCDC78-216ENST00000544996 ZNF525Q8N782 197 aa13.56□□□□□ -0.24
CCDC78-216ENST00000544996 FAM168AQ92567 244 aa13.56□□□□□ -0.24
CCDC78-216ENST00000544996 SORCS2Q96PQ0 1159 aa13.56□□□□□ -0.24
CCDC78-216ENST00000544996 WACQ9BTA9 647 aa13.56□□□□□ -0.24
CCDC78-216ENST00000544996 IFT27Q9BW83 186 aa13.56□□□□□ -0.24
CCDC78-216ENST00000544996 SYT4Q9H2B2 425 aa13.56□□□□□ -0.24
CCDC78-216ENST00000544996 RERGLQ9H628 205 aa13.56□□□□□ -0.24
CCDC78-216ENST00000544996 REEP1Q9H902 201 aa13.56□□□□□ -0.24
CCDC78-216ENST00000544996 POLE4Q9NR33 117 aa13.56□□□□□ -0.24
CCDC78-216ENST00000544996 VSX1Q9NZR4 365 aaPredicted RBP13.56□□□□□ -0.24
CCDC78-216ENST00000544996 FLNAP21333 2647 aaKnown RBP13.56□□□□□ -0.24
CCDC78-216ENST00000544996 PLCE1Q9P212 2302 aa13.56□□□□□ -0.24
CCDC78-216ENST00000544996 ACOT8O14734 319 aa13.55□□□□□ -0.24
CCDC78-216ENST00000544996 SLC16A7O60669 478 aa13.55□□□□□ -0.24
CCDC78-216ENST00000544996 KHDRBS3O75525 346 aaKnown RBP13.55□□□□□ -0.24
CCDC78-216ENST00000544996 CCNB2O95067 398 aa13.55□□□□□ -0.24
CCDC78-216ENST00000544996 PPP1R3DO95685 299 aa13.55□□□□□ -0.24
CCDC78-216ENST00000544996 LY6G6DO95868 133 aa13.55□□□□□ -0.24
CCDC78-216ENST00000544996 HEXAP06865 529 aa13.55□□□□□ -0.24
CCDC78-216ENST00000544996 FAM157BP0CG42 384 aa13.55□□□□□ -0.24
CCDC78-216ENST00000544996 CTLA4P16410 223 aa13.55□□□□□ -0.24
CCDC78-216ENST00000544996 HOXB6P17509 224 aaKnown RBP13.55□□□□□ -0.24
CCDC78-216ENST00000544996 CCNOP22674 350 aa13.55□□□□□ -0.24
CCDC78-216ENST00000544996 APEX1P27695 318 aaKnown RBP13.55□□□□□ -0.24
CCDC78-216ENST00000544996 PCSK6P29122 969 aa13.55□□□□□ -0.24
CCDC78-216ENST00000544996 CRABP1P29762 137 aa13.55□□□□□ -0.24
CCDC78-216ENST00000544996 GDI2P50395 445 aaKnown RBP13.55□□□□□ -0.24
CCDC78-216ENST00000544996 PSG4Q00888 419 aa13.55□□□□□ -0.24
CCDC78-216ENST00000544996 OR2T5Q6IEZ7 315 aa13.55□□□□□ -0.24
CCDC78-216ENST00000544996 RGS7BPQ6MZT1 257 aaPredicted RBP13.55□□□□□ -0.24
CCDC78-216ENST00000544996 RPL13AP3Q6NVV1 102 aa13.55□□□□□ -0.24
CCDC78-216ENST00000544996 DNM1P34Q6PK57 102 aa13.55□□□□□ -0.24
CCDC78-216ENST00000544996 UNQ6126/PRO20091Q6UXV3 157 aa13.55□□□□□ -0.24
CCDC78-216ENST00000544996 SYT9Q86SS6 491 aa13.55□□□□□ -0.24
CCDC78-216ENST00000544996 JAZF1Q86VZ6 243 aa13.55□□□□□ -0.24
CCDC78-216ENST00000544996 GLB1L2Q8IW92 636 aa13.55□□□□□ -0.24
CCDC78-216ENST00000544996 CPEB3Q8NE35 698 aaKnown RBP13.55□□□□□ -0.24
CCDC78-216ENST00000544996 OR10H5Q8NGA6 315 aa13.55□□□□□ -0.24
CCDC78-216ENST00000544996 OR2T29Q8NH02 315 aa13.55□□□□□ -0.24
CCDC78-216ENST00000544996 SAMD8Q96LT4 415 aa13.55□□□□□ -0.24
CCDC78-216ENST00000544996 BTBD10Q9BSF8 475 aa13.55□□□□□ -0.24
CCDC78-216ENST00000544996 ZNF416Q9BWM5 594 aa13.55□□□□□ -0.24
CCDC78-216ENST00000544996 MRPL37Q9BZE1 423 aaKnown RBP13.55□□□□□ -0.24
CCDC78-216ENST00000544996 BCL2L14Q9BZR8 327 aa13.55□□□□□ -0.24
CCDC78-216ENST00000544996 OR2H1Q9GZK4 316 aa13.55□□□□□ -0.24
CCDC78-216ENST00000544996 MS4A5Q9H3V2 200 aa13.55□□□□□ -0.24
CCDC78-216ENST00000544996 MYOZ1Q9NP98 299 aaPredicted RBP13.55□□□□□ -0.24
CCDC78-216ENST00000544996 EIF3KQ9UBQ5 218 aaKnown RBP13.55□□□□□ -0.24
CCDC78-216ENST00000544996 SAMHD1Q9Y3Z3 626 aaKnown RBP13.55□□□□□ -0.24
CCDC78-216ENST00000544996 TMEM129A0AVI4 362 aa13.54□□□□□ -0.24
CCDC78-216ENST00000544996 AQP12BA6NM10 295 aa13.54□□□□□ -0.24
CCDC78-216ENST00000544996 ARPC3O15145 178 aa13.54□□□□□ -0.24
CCDC78-216ENST00000544996 SYNGR3O43761 229 aa13.54□□□□□ -0.24
CCDC78-216ENST00000544996 IDH3BO43837 385 aa13.54□□□□□ -0.24
CCDC78-216ENST00000544996 DNAJC8O75937 253 aaPredicted RBP13.54□□□□□ -0.24
CCDC78-216ENST00000544996 LCKP06239 509 aa13.54□□□□□ -0.24
CCDC78-216ENST00000544996 ADRA2AP08913 450 aa13.54□□□□□ -0.24
CCDC78-216ENST00000544996 UCP2P55851 309 aa13.54□□□□□ -0.24
CCDC78-216ENST00000544996 SCRN3Q0VDG4 424 aa13.54□□□□□ -0.24
CCDC78-216ENST00000544996 ZNF620Q6ZNG0 422 aa13.54□□□□□ -0.24
CCDC78-216ENST00000544996 Q71RC1 249 aaPredicted RBP13.54□□□□□ -0.24
CCDC78-216ENST00000544996 AQP12AQ8IXF9 295 aa13.54□□□□□ -0.24
CCDC78-216ENST00000544996 PAQR4Q8N4S7 273 aaPredicted RBP13.54□□□□□ -0.24
CCDC78-216ENST00000544996 OR52L1Q8NGH7 329 aa13.54□□□□□ -0.24
CCDC78-216ENST00000544996 OR4C15Q8NGM1 316 aa13.54□□□□□ -0.24
CCDC78-216ENST00000544996 AKR7LQ8NHP1 331 aa13.54□□□□□ -0.24
CCDC78-216ENST00000544996 NEU4Q8WWR8 484 aaPredicted RBP13.54□□□□□ -0.24
CCDC78-216ENST00000544996 C11orf40Q8WZ69 217 aa13.54□□□□□ -0.24
CCDC78-216ENST00000544996 SYT3Q9BQG1 590 aa13.54□□□□□ -0.24
CCDC78-216ENST00000544996 CHID1Q9BWS9 393 aa13.54□□□□□ -0.24
CCDC78-216ENST00000544996 EMC7Q9NPA0 242 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms