RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 SCRG1O75711 98 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 ZFAND5O76080 213 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 NAGAP17050 411 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 FCARP24071 287 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 SFTPDP35247 375 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 SLC25A1P53007 311 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.26□□□□□ -1.57
VPS50-220ENST00000544910 HYAL4Q2M3T9 481 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 FAM27D1Q5T7N8 215 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 ZNF585AQ6P3V2 769 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 SPRED2Q7Z698 418 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 TEX19Q8NA77 164 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 DNAAF1Q8NEP3 725 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 OR1M1Q8NGA1 313 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 TSLPQ969D9 159 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 SPIN2AQ99865 258 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 SPIN2BQ9BPZ2 258 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 SEC22CQ9BRL7 303 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 OR52A1Q9UKL2 312 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 EMC9Q9Y3B6 208 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 CELA2BP08218 269 aaPredicted RBP5.26□□□□□ -1.57
VPS50-220ENST00000544910 ANXA7P20073 488 aaKnown RBP5.26□□□□□ -1.57
VPS50-220ENST00000544910 CSNK1EP49674 416 aaKnown RBP5.26□□□□□ -1.57
VPS50-220ENST00000544910 SLC26A5P58743 744 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 GPLD1P80108 840 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 BCL2A1Q16548 175 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 NKAIN3Q8N8D7 197 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 SPTSSAQ969W0 71 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 ZBTB8AQ96BR9 441 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 ZC3HAV1LQ96H79 300 aaKnown RBP5.26□□□□□ -1.57
VPS50-220ENST00000544910 FAM71F1Q96KD3 344 aaPredicted RBP5.26□□□□□ -1.57
VPS50-220ENST00000544910 OR6C1Q96RD1 312 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 NUDT22Q9BRQ3 303 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 SARGQ9BW04 601 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 POFUT1Q9H488 388 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 ZNF576Q9H609 170 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 PLSCR3Q9NRY6 295 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 HAO2Q9NYQ3 351 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 TMEM82A0PJX8 343 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 OR6C6A6NF89 314 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 H3BUI4 141 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 SULT2B1O00204 365 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 P2RY10O00398 339 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 CYR61O00622 381 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 PPP1R2P9O14990 202 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 BPNT1O95861 308 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 DCNP07585 359 aaKnown RBP5.26□□□□□ -1.57
VPS50-220ENST00000544910 ACHEP22303 614 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 APOBEC1P41238 236 aaKnown RBP5.26□□□□□ -1.57
VPS50-220ENST00000544910 POU3F4P49335 361 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 LSM11P83369 360 aaKnown RBP eCLIP5.26□□□□□ -1.57
VPS50-220ENST00000544910 PLGLB1Q02325 96 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 BAMBIQ13145 260 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 CORO6Q6QEF8 472 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 THSD4Q6ZMP0 1018 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 SYT9Q86SS6 491 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 MRPL41Q8IXM3 137 aaKnown RBP5.26□□□□□ -1.57
VPS50-220ENST00000544910 TM4SF19Q96DZ7 209 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 TRMT61AQ96FX7 289 aaKnown RBP5.26□□□□□ -1.57
VPS50-220ENST00000544910 NRSN2Q9GZP1 204 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 RNF32Q9H0A6 362 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 SLC25A32Q9H2D1 315 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 ZNF160Q9HCG1 818 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 TAS2R4Q9NYW5 299 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 FOXJ3Q9UPW0 622 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 COA3Q9Y2R0 106 aaPredicted RBP5.26□□□□□ -1.57
VPS50-220ENST00000544910 PRELID3BQ9Y3B1 194 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 PRSS37A4D1T9 235 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 GPR171O14626 319 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 YKT6O15498 198 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 TGOLN2O43493 480 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 RAD51DO75771 328 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 DCDP81605 110 aaKnown RBP5.26□□□□□ -1.57
VPS50-220ENST00000544910 OC90Q02509 493 aaPredicted RBP5.26□□□□□ -1.57
VPS50-220ENST00000544910 TNK1Q13470 666 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 CDONQ4KMG0 1287 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 ZNF658BQ4V348 819 aaPredicted RBP5.26□□□□□ -1.57
VPS50-220ENST00000544910 HIST2H3PS2Q5TEC6 136 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 KCNIP4Q6PIL6 250 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 TSSK4Q6SA08 328 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 DCXRQ7Z4W1 244 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 LINC00346Q8IVM7 164 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 OR51D1Q8NGF3 324 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 UPRTQ96BW1 309 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 MVB12AQ96EY5 273 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 DCLRE1CQ96SD1 692 aaKnown RBP5.26□□□□□ -1.57
VPS50-220ENST00000544910 WWTR1Q9GZV5 400 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 TSPAN10Q9H1Z9 355 aaPredicted RBP5.26□□□□□ -1.57
VPS50-220ENST00000544910 FLRT3Q9NZU0 649 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 TTLL8A6PVC2 850 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 SEC14L5O43304 696 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 GIPP09681 153 aaPredicted RBP5.26□□□□□ -1.57
VPS50-220ENST00000544910 FOLR3P41439 243 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 RAD52P43351 418 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 CSNK1A1P48729 337 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 GFERP55789 205 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 BIDP55957 195 aa5.26□□□□□ -1.57
VPS50-220ENST00000544910 CSNK2A1P68400 391 aaPredicted RBP5.26□□□□□ -1.57
VPS50-220ENST00000544910 SORDQ00796 357 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms