RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 TBC1D28Q2M2D7 210 aa10.82□□□□□ -0.68
USP28-212ENST00000544750 TMEM53Q6P2H8 277 aa10.82□□□□□ -0.68
USP28-212ENST00000544750 C9orf139Q6ZV77 190 aa10.82□□□□□ -0.68
USP28-212ENST00000544750 CCDC80Q76M96 950 aa10.82□□□□□ -0.68
USP28-212ENST00000544750 ZNF771Q7L3S4 317 aaPredicted RBP10.82□□□□□ -0.68
USP28-212ENST00000544750 DPPA2Q7Z7J5 298 aa10.82□□□□□ -0.68
USP28-212ENST00000544750 SLC30A8Q8IWU4 369 aa10.82□□□□□ -0.68
USP28-212ENST00000544750 OR4D11Q8NGI4 311 aa10.82□□□□□ -0.68
USP28-212ENST00000544750 OR5J2Q8NH18 312 aa10.82□□□□□ -0.68
USP28-212ENST00000544750 ST7LQ8TDW4 575 aa10.82□□□□□ -0.68
USP28-212ENST00000544750 TMIGD2Q96BF3 282 aa10.82□□□□□ -0.68
USP28-212ENST00000544750 MARS2Q96GW9 593 aaKnown RBP10.82□□□□□ -0.68
USP28-212ENST00000544750 EPYCQ99645 322 aa10.82□□□□□ -0.68
USP28-212ENST00000544750 ARHGDIGQ99819 225 aa10.82□□□□□ -0.68
USP28-212ENST00000544750 TMEM43Q9BTV4 400 aa10.82□□□□□ -0.68
USP28-212ENST00000544750 CMTM6Q9NX76 183 aa10.82□□□□□ -0.68
USP28-212ENST00000544750 DCAF16Q9NXF7 216 aa10.82□□□□□ -0.68
USP28-212ENST00000544750 UBAP1Q9NZ09 502 aa10.82□□□□□ -0.68
USP28-212ENST00000544750 TESQ9UGI8 421 aaKnown RBP10.82□□□□□ -0.68
USP28-212ENST00000544750 KLHL21Q9UJP4 597 aa10.82□□□□□ -0.68
USP28-212ENST00000544750 ISPDA4D126 451 aa10.81□□□□□ -0.68
USP28-212ENST00000544750 PRORSD1PA6NEY8 169 aa10.81□□□□□ -0.68
USP28-212ENST00000544750 ZSCAN5BA6NJL1 495 aa10.81□□□□□ -0.68
USP28-212ENST00000544750 FAM220BPB1ANY3 271 aa10.81□□□□□ -0.68
USP28-212ENST00000544750 M0R3H8 397 aa10.81□□□□□ -0.68
USP28-212ENST00000544750 ENTPD5O75356 428 aa10.81□□□□□ -0.68
USP28-212ENST00000544750 SERPINB7O75635 380 aa10.81□□□□□ -0.68
USP28-212ENST00000544750 SERPINI2O75830 405 aa10.81□□□□□ -0.68
USP28-212ENST00000544750 PTHP01270 115 aa10.81□□□□□ -0.68
USP28-212ENST00000544750 MT-ND5P03915 603 aa10.81□□□□□ -0.68
USP28-212ENST00000544750 CD55P08174 381 aa10.81□□□□□ -0.68
USP28-212ENST00000544750 PGA4P0DJD7 388 aa10.81□□□□□ -0.68
USP28-212ENST00000544750 PGA3P0DJD8 388 aa10.81□□□□□ -0.68
USP28-212ENST00000544750 AHCYP23526 432 aa10.81□□□□□ -0.68
USP28-212ENST00000544750 MPV17P39210 176 aa10.81□□□□□ -0.68
USP28-212ENST00000544750 RGS8P57771 180 aaPredicted RBP10.81□□□□□ -0.68
USP28-212ENST00000544750 SEC61A1P61619 476 aaKnown RBP10.81□□□□□ -0.68
USP28-212ENST00000544750 PAX8Q06710 450 aa10.81□□□□□ -0.68
USP28-212ENST00000544750 OR1Q1Q15612 314 aa10.81□□□□□ -0.68
USP28-212ENST00000544750 HIST3H3Q16695 136 aa10.81□□□□□ -0.68
USP28-212ENST00000544750 NRN1LQ496H8 165 aa10.81□□□□□ -0.68
USP28-212ENST00000544750 LINC00114Q6XXX2 140 aa10.81□□□□□ -0.68
USP28-212ENST00000544750 SLC35D2Q76EJ3 337 aa10.81□□□□□ -0.68
USP28-212ENST00000544750 RHOUQ7L0Q8 258 aa10.81□□□□□ -0.68
USP28-212ENST00000544750 PATL1Q86TB9 770 aaKnown RBP10.81□□□□□ -0.68
USP28-212ENST00000544750 TSPYL5Q86VY4 417 aaPredicted RBP10.81□□□□□ -0.68
USP28-212ENST00000544750 ZNF101Q8IZC7 436 aa10.81□□□□□ -0.68
USP28-212ENST00000544750 PCYOX1LQ8NBM8 494 aa10.81□□□□□ -0.68
USP28-212ENST00000544750 CPEB3Q8NE35 698 aaKnown RBP10.81□□□□□ -0.68
USP28-212ENST00000544750 OR4K5Q8NGD3 323 aa10.81□□□□□ -0.68
USP28-212ENST00000544750 OR1J2Q8NGS2 313 aa10.81□□□□□ -0.68
USP28-212ENST00000544750 OR1J1Q8NGS3 322 aa10.81□□□□□ -0.68
USP28-212ENST00000544750 IPCEF1Q8WWN9 437 aaPredicted RBP10.81□□□□□ -0.68
USP28-212ENST00000544750 WFDC12Q8WWY7 111 aa10.81□□□□□ -0.68
USP28-212ENST00000544750 SLC25A44Q96H78 314 aaPredicted RBP10.81□□□□□ -0.68
USP28-212ENST00000544750 SH3GL1Q99961 368 aa10.81□□□□□ -0.68
USP28-212ENST00000544750 ECSITQ9BQ95 431 aa10.81□□□□□ -0.68
USP28-212ENST00000544750 NSRP1Q9H0G5 558 aaKnown RBP10.81□□□□□ -0.68
USP28-212ENST00000544750 PATZ1Q9HBE1 687 aaKnown RBP10.81□□□□□ -0.68
USP28-212ENST00000544750 GID8Q9NWU2 228 aa10.81□□□□□ -0.68
USP28-212ENST00000544750 FAM53CQ9NYF3 392 aa10.81□□□□□ -0.68
USP28-212ENST00000544750 TAS2R5Q9NYW4 299 aa10.81□□□□□ -0.68
USP28-212ENST00000544750 NPTNQ9Y639 398 aa10.81□□□□□ -0.68
USP28-212ENST00000544750 SOX21Q9Y651 276 aaPredicted RBP10.81□□□□□ -0.68
USP28-212ENST00000544750 C11orf98E9PRG8 122 aa10.8□□□□□ -0.68
USP28-212ENST00000544750 F5H0A9 414 aaPredicted RBP10.8□□□□□ -0.68
USP28-212ENST00000544750 SPRY3O43610 288 aa10.8□□□□□ -0.68
USP28-212ENST00000544750 FARS2O95363 451 aaKnown RBP10.8□□□□□ -0.68
USP28-212ENST00000544750 MT-ATP6P00846 226 aa10.8□□□□□ -0.68
USP28-212ENST00000544750 ADORA3P0DMS8 318 aa10.8□□□□□ -0.68
USP28-212ENST00000544750 OMGP23515 440 aa10.8□□□□□ -0.68
USP28-212ENST00000544750 RBMXP38159 391 aaKnown RBP10.8□□□□□ -0.68
USP28-212ENST00000544750 WNT5AP41221 380 aa10.8□□□□□ -0.68
USP28-212ENST00000544750 SLC6A9P48067 706 aa10.8□□□□□ -0.68
USP28-212ENST00000544750 CDH12P55289 794 aa10.8□□□□□ -0.68
USP28-212ENST00000544750 PAX2Q02962 417 aa10.8□□□□□ -0.68
USP28-212ENST00000544750 SLC36A2Q495M3 483 aa10.8□□□□□ -0.68
USP28-212ENST00000544750 MBNL2Q5VZF2 373 aaKnown RBP10.8□□□□□ -0.68
USP28-212ENST00000544750 C16orf87Q6PH81 154 aa10.8□□□□□ -0.68
USP28-212ENST00000544750 SLC16A14Q7RTX9 510 aa10.8□□□□□ -0.68
USP28-212ENST00000544750 PIGWQ7Z7B1 504 aa10.8□□□□□ -0.68
USP28-212ENST00000544750 CPLX4Q7Z7G2 160 aa10.8□□□□□ -0.68
USP28-212ENST00000544750 RBM45Q8IUH3 476 aaKnown RBP10.8□□□□□ -0.68
USP28-212ENST00000544750 SLC15A3Q8IY34 581 aa10.8□□□□□ -0.68
USP28-212ENST00000544750 ICA1LQ8NDH6 482 aa10.8□□□□□ -0.68
USP28-212ENST00000544750 OR6T1Q8NGN1 323 aa10.8□□□□□ -0.68
USP28-212ENST00000544750 ZNF566Q969W8 418 aa10.8□□□□□ -0.68
USP28-212ENST00000544750 CITED1Q99966 193 aa10.8□□□□□ -0.68
USP28-212ENST00000544750 PRDM13Q9H4Q3 707 aa10.8□□□□□ -0.68
USP28-212ENST00000544750 RNF121Q9H920 327 aa10.8□□□□□ -0.68
USP28-212ENST00000544750 EGFL7Q9UHF1 273 aa10.8□□□□□ -0.68
USP28-212ENST00000544750 A0A1B0GUS0 222 aa10.79□□□□□ -0.68
USP28-212ENST00000544750 IQCMA0A1B0GVH7 501 aa10.79□□□□□ -0.68
USP28-212ENST00000544750 NME4O00746 187 aa10.79□□□□□ -0.68
USP28-212ENST00000544750 LYPD3O95274 346 aa10.79□□□□□ -0.68
USP28-212ENST00000544750 PLATP00750 562 aa10.79□□□□□ -0.68
USP28-212ENST00000544750 THY1P04216 161 aa10.79□□□□□ -0.68
USP28-212ENST00000544750 QDPRP09417 244 aa10.79□□□□□ -0.68
USP28-212ENST00000544750 PPIAL4GP0DN37 164 aa10.79□□□□□ -0.68
USP28-212ENST00000544750 IGHV4-38-2P0DP08 117 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms