RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 TEX37Q96LM6 180 aa14.19□□□□□ -0.14
CHD4-210ENST00000544040 C10orf90Q96M02 699 aa14.19□□□□□ -0.14
CHD4-210ENST00000544040 ATP13A2Q9NQ11 1180 aa14.19□□□□□ -0.14
CHD4-210ENST00000544040 SLC2A8Q9NY64 477 aa14.19□□□□□ -0.14
CHD4-210ENST00000544040 ADAM29Q9UKF5 820 aa14.19□□□□□ -0.14
CHD4-210ENST00000544040 SPEF2Q9C093 1822 aa14.19□□□□□ -0.14
CHD4-210ENST00000544040 MYH11P35749 1972 aa14.19□□□□□ -0.14
CHD4-210ENST00000544040 PNPP00491 289 aa14.19□□□□□ -0.14
CHD4-210ENST00000544040 RBPJQ06330 500 aa14.19□□□□□ -0.14
CHD4-210ENST00000544040 GGTA1PQ4G0N0 100 aa14.19□□□□□ -0.14
CHD4-210ENST00000544040 PDLIM5Q96HC4 596 aaKnown RBP14.19□□□□□ -0.14
CHD4-210ENST00000544040 BARHL1Q9BZE3 327 aa14.19□□□□□ -0.14
CHD4-210ENST00000544040 NRSN2Q9GZP1 204 aa14.19□□□□□ -0.14
CHD4-210ENST00000544040 MN1Q10571 1320 aaPredicted RBP14.18□□□□□ -0.14
CHD4-210ENST00000544040 H7BYZ3 331 aa14.18□□□□□ -0.14
CHD4-210ENST00000544040 NME1P15531 152 aaKnown RBP14.18□□□□□ -0.14
CHD4-210ENST00000544040 C11orf42Q8N5U0 333 aa14.18□□□□□ -0.14
CHD4-210ENST00000544040 PLA2G12AQ9BZM1 189 aa14.18□□□□□ -0.14
CHD4-210ENST00000544040 BARX1Q9HBU1 254 aaPredicted RBP14.18□□□□□ -0.14
CHD4-210ENST00000544040 C3P01024 1663 aa14.18□□□□□ -0.14
CHD4-210ENST00000544040 TEAD1P28347 426 aa14.18□□□□□ -0.14
CHD4-210ENST00000544040 C17orf67Q0P5P2 114 aa14.18□□□□□ -0.14
CHD4-210ENST00000544040 CLEC9AQ6UXN8 241 aa14.18□□□□□ -0.14
CHD4-210ENST00000544040 ZNF620Q6ZNG0 422 aa14.18□□□□□ -0.14
CHD4-210ENST00000544040 Q6ZNX1 250 aa14.18□□□□□ -0.14
CHD4-210ENST00000544040 NKAIN3Q8N8D7 197 aa14.18□□□□□ -0.14
CHD4-210ENST00000544040 TMEM200CA6NKL6 621 aa14.18□□□□□ -0.14
CHD4-210ENST00000544040 H0YIV9 168 aa14.18□□□□□ -0.14
CHD4-210ENST00000544040 GLCEO94923 617 aa14.18□□□□□ -0.14
CHD4-210ENST00000544040 SLC2A10O95528 541 aa14.18□□□□□ -0.14
CHD4-210ENST00000544040 HOXD9P28356 352 aaPredicted RBP14.18□□□□□ -0.14
CHD4-210ENST00000544040 SUMO1P63165 101 aaKnown RBP14.18□□□□□ -0.14
CHD4-210ENST00000544040 PRSS35Q8N3Z0 413 aa14.18□□□□□ -0.14
CHD4-210ENST00000544040 SLC25A46Q96AG3 418 aa14.18□□□□□ -0.14
CHD4-210ENST00000544040 PINX1Q96BK5 328 aaKnown RBP14.18□□□□□ -0.14
CHD4-210ENST00000544040 SOX7Q9BT81 388 aa14.18□□□□□ -0.14
CHD4-210ENST00000544040 EMC6Q9BV81 110 aa14.18□□□□□ -0.14
CHD4-210ENST00000544040 TWSG1Q9GZX9 223 aa14.18□□□□□ -0.14
CHD4-210ENST00000544040 PADI1Q9ULC6 663 aa14.18□□□□□ -0.14
CHD4-210ENST00000544040 IGKV6D-21A0A0A0MT36 114 aa14.18□□□□□ -0.14
CHD4-210ENST00000544040 ZNF26P17031 533 aaPredicted RBP14.18□□□□□ -0.14
CHD4-210ENST00000544040 DEFB103AP81534 67 aa14.18□□□□□ -0.14
CHD4-210ENST00000544040 TBC1D28Q2M2D7 210 aa14.18□□□□□ -0.14
CHD4-210ENST00000544040 TMEM88Q6PEY1 159 aa14.18□□□□□ -0.14
CHD4-210ENST00000544040 OR6K3Q8NGY3 331 aa14.18□□□□□ -0.14
CHD4-210ENST00000544040 PIGQQ9BRB3 760 aa14.18□□□□□ -0.14
CHD4-210ENST00000544040 FER1L4A9Z1Z3 1794 aa14.18□□□□□ -0.14
CHD4-210ENST00000544040 IGHV3-20A0A0C4DH32 117 aa14.18□□□□□ -0.14
CHD4-210ENST00000544040 FAM221AA4D161 298 aa14.18□□□□□ -0.14
CHD4-210ENST00000544040 TAPBPO15533 448 aa14.18□□□□□ -0.14
CHD4-210ENST00000544040 SOD1P00441 154 aa14.18□□□□□ -0.14
CHD4-210ENST00000544040 GUSBP08236 651 aa14.18□□□□□ -0.14
CHD4-210ENST00000544040 MMP11P24347 488 aa14.18□□□□□ -0.14
CHD4-210ENST00000544040 ECI1P42126 302 aa14.18□□□□□ -0.14
CHD4-210ENST00000544040 PRTGQ2VWP7 1150 aa14.18□□□□□ -0.14
CHD4-210ENST00000544040 ASTLQ6HA08 431 aaPredicted RBP14.18□□□□□ -0.14
CHD4-210ENST00000544040 OR13D1Q8NGV5 346 aa14.18□□□□□ -0.14
CHD4-210ENST00000544040 Q96M85 177 aa14.18□□□□□ -0.14
CHD4-210ENST00000544040 IL3RAP26951 378 aa14.17□□□□□ -0.14
CHD4-210ENST00000544040 DCAF12Q5T6F0 453 aa14.17□□□□□ -0.14
CHD4-210ENST00000544040 Q6ZSR9 355 aa14.17□□□□□ -0.14
CHD4-210ENST00000544040 NANOGP1Q8N7R0 232 aa14.17□□□□□ -0.14
CHD4-210ENST00000544040 LYSMD1Q96S90 227 aa14.17□□□□□ -0.14
CHD4-210ENST00000544040 SLC25A21Q9BQT8 299 aaPredicted RBP14.17□□□□□ -0.14
CHD4-210ENST00000544040 SYT5O00445 386 aa14.17□□□□□ -0.14
CHD4-210ENST00000544040 FPR3P25089 353 aa14.17□□□□□ -0.14
CHD4-210ENST00000544040 MPGP29372 298 aa14.17□□□□□ -0.14
CHD4-210ENST00000544040 RPL13AP40429 203 aaKnown RBP14.17□□□□□ -0.14
CHD4-210ENST00000544040 SNRPNP63162 240 aaKnown RBP14.17□□□□□ -0.14
CHD4-210ENST00000544040 DCDP81605 110 aaKnown RBP14.17□□□□□ -0.14
CHD4-210ENST00000544040 Q1RN00 199 aa14.17□□□□□ -0.14
CHD4-210ENST00000544040 SLCO4C1Q6ZQN7 724 aa14.17□□□□□ -0.14
CHD4-210ENST00000544040 TMEM99Q8N816 258 aa14.17□□□□□ -0.14
CHD4-210ENST00000544040 SEMA6DQ8NFY4 1073 aa14.17□□□□□ -0.14
CHD4-210ENST00000544040 A0A0B4J203 849 aa14.17□□□□□ -0.14
CHD4-210ENST00000544040 GFRA2O00451 464 aa14.17□□□□□ -0.14
CHD4-210ENST00000544040 SDCBPO00560 298 aaPredicted RBP14.17□□□□□ -0.14
CHD4-210ENST00000544040 PI3P19957 117 aa14.17□□□□□ -0.14
CHD4-210ENST00000544040 FCGR2CP31995 323 aa14.17□□□□□ -0.14
CHD4-210ENST00000544040 TMEM268Q5VZI3 342 aa14.17□□□□□ -0.14
CHD4-210ENST00000544040 PAQR6Q6TCH4 344 aa14.17□□□□□ -0.14
CHD4-210ENST00000544040 LFNGQ8NES3 379 aa14.17□□□□□ -0.14
CHD4-210ENST00000544040 OR10G3Q8NGC4 313 aa14.17□□□□□ -0.14
CHD4-210ENST00000544040 ZNF596Q8TC21 504 aa14.17□□□□□ -0.14
CHD4-210ENST00000544040 UBQLN3Q9H347 655 aa14.17□□□□□ -0.14
CHD4-210ENST00000544040 B3GALT5Q9Y2C3 310 aa14.17□□□□□ -0.14
CHD4-210ENST00000544040 TIMP1P01033 207 aa14.17□□□□□ -0.14
CHD4-210ENST00000544040 RFX2P48378 723 aa14.17□□□□□ -0.14
CHD4-210ENST00000544040 MRPL19P49406 292 aaKnown RBP14.17□□□□□ -0.14
CHD4-210ENST00000544040 TEKQ02763 1124 aa14.17□□□□□ -0.14
CHD4-210ENST00000544040 MLF2Q15773 248 aaPredicted RBP14.17□□□□□ -0.14
CHD4-210ENST00000544040 MPPED2Q15777 294 aa14.17□□□□□ -0.14
CHD4-210ENST00000544040 NKAIN4Q8IVV8 208 aa14.17□□□□□ -0.14
CHD4-210ENST00000544040 NGBQ9NPG2 151 aa14.17□□□□□ -0.14
CHD4-210ENST00000544040 B3GAT1Q9P2W7 334 aa14.17□□□□□ -0.14
CHD4-210ENST00000544040 BTBD17A6NE02 478 aa14.17□□□□□ -0.14
CHD4-210ENST00000544040 G3V3Q6 166 aa14.17□□□□□ -0.14
CHD4-210ENST00000544040 PTBP3O95758 552 aaKnown RBP14.17□□□□□ -0.14
CHD4-210ENST00000544040 BCL6P41182 706 aa14.17□□□□□ -0.14
CHD4-210ENST00000544040 KRTDAPP60985 99 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms