RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 ATP1B1P05026 303 aa10.27□□□□□ -0.77
CDH4-201ENST00000543233 MMP7P09237 267 aaPredicted RBP10.27□□□□□ -0.77
CDH4-201ENST00000543233 ARAFP10398 606 aa10.27□□□□□ -0.77
CDH4-201ENST00000543233 ATF1P18846 271 aa10.27□□□□□ -0.77
CDH4-201ENST00000543233 RAB6AP20340 208 aa10.27□□□□□ -0.77
CDH4-201ENST00000543233 BUD31P41223 144 aaPredicted RBP10.27□□□□□ -0.77
CDH4-201ENST00000543233 PTH2RP49190 550 aa10.27□□□□□ -0.77
CDH4-201ENST00000543233 TDGF1P3P51864 188 aa10.27□□□□□ -0.77
CDH4-201ENST00000543233 TMEM52BQ4KMG9 183 aa10.27□□□□□ -0.77
CDH4-201ENST00000543233 ELFN2Q5R3F8 820 aa10.27□□□□□ -0.77
CDH4-201ENST00000543233 EXOSC6Q5RKV6 272 aaKnown RBP10.27□□□□□ -0.77
CDH4-201ENST00000543233 SMARCD3Q6STE5 483 aa10.27□□□□□ -0.77
CDH4-201ENST00000543233 IL34Q6ZMJ4 242 aa10.27□□□□□ -0.77
CDH4-201ENST00000543233 CAMKMTQ7Z624 323 aa10.27□□□□□ -0.77
CDH4-201ENST00000543233 ZNF610Q8N9Z0 462 aa10.27□□□□□ -0.77
CDH4-201ENST00000543233 STEAP2Q8NFT2 490 aa10.27□□□□□ -0.77
CDH4-201ENST00000543233 BRIX1Q8TDN6 353 aaKnown RBP10.27□□□□□ -0.77
CDH4-201ENST00000543233 EXTL1Q92935 676 aa10.27□□□□□ -0.77
CDH4-201ENST00000543233 MRGPRX4Q96LA9 322 aa10.27□□□□□ -0.77
CDH4-201ENST00000543233 AK6Q9Y3D8 172 aaKnown RBP10.27□□□□□ -0.77
CDH4-201ENST00000543233 ZNF337Q9Y3M9 751 aa10.27□□□□□ -0.77
CDH4-201ENST00000543233 TMEM272A0A1B0GTI8 110 aa10.26□□□□□ -0.77
CDH4-201ENST00000543233 BCAT2O15382 392 aaPredicted RBP10.26□□□□□ -0.77
CDH4-201ENST00000543233 RPN2P04844 631 aa10.26□□□□□ -0.77
CDH4-201ENST00000543233 CASRP41180 1078 aa10.26□□□□□ -0.77
CDH4-201ENST00000543233 CSNK1G2P78368 415 aa10.26□□□□□ -0.77
CDH4-201ENST00000543233 HGFACQ04756 655 aa10.26□□□□□ -0.77
CDH4-201ENST00000543233 PDE7AQ13946 482 aa10.26□□□□□ -0.77
CDH4-201ENST00000543233 C4orf17Q53FE4 359 aa10.26□□□□□ -0.77
CDH4-201ENST00000543233 MESTQ5EB52 335 aa10.26□□□□□ -0.77
CDH4-201ENST00000543233 EOGTQ5NDL2 527 aa10.26□□□□□ -0.77
CDH4-201ENST00000543233 ZNF793Q6ZN11 406 aa10.26□□□□□ -0.77
CDH4-201ENST00000543233 FAM98AQ8NCA5 519 aaKnown RBP10.26□□□□□ -0.77
CDH4-201ENST00000543233 SRMSQ9H3Y6 488 aa10.26□□□□□ -0.77
CDH4-201ENST00000543233 THAP10Q9P2Z0 257 aaPredicted RBP10.26□□□□□ -0.77
CDH4-201ENST00000543233 YBX2Q9Y2T7 364 aaKnown RBP10.26□□□□□ -0.77
CDH4-201ENST00000543233 MRPS18CQ9Y3D5 142 aaKnown RBP10.26□□□□□ -0.77
CDH4-201ENST00000543233 CACNA1IQ9P0X4 2223 aa10.26□□□□□ -0.77
CDH4-201ENST00000543233 BLOC1S5-TXNDC5H3BN57 136 aa10.26□□□□□ -0.77
CDH4-201ENST00000543233 FFAR1O14842 300 aa10.26□□□□□ -0.77
CDH4-201ENST00000543233 MAGEB4O15481 346 aaPredicted RBP10.26□□□□□ -0.77
CDH4-201ENST00000543233 TMEM127O75204 238 aa10.26□□□□□ -0.77
CDH4-201ENST00000543233 OR2C1O95371 312 aa10.26□□□□□ -0.77
CDH4-201ENST00000543233 ZNF888P0CJ79 500 aaPredicted RBP10.26□□□□□ -0.77
CDH4-201ENST00000543233 PPP2R1BP30154 601 aa10.26□□□□□ -0.77
CDH4-201ENST00000543233 TSPAN31Q12999 210 aa10.26□□□□□ -0.77
CDH4-201ENST00000543233 GGNBP1Q5YKI7 109 aa10.26□□□□□ -0.77
CDH4-201ENST00000543233 ZNF283Q8N7M2 679 aa10.26□□□□□ -0.77
CDH4-201ENST00000543233 POGLUT1Q8NBL1 392 aa10.26□□□□□ -0.77
CDH4-201ENST00000543233 OR4D11Q8NGI4 311 aa10.26□□□□□ -0.77
CDH4-201ENST00000543233 OR51G2Q8NGK0 314 aa10.26□□□□□ -0.77
CDH4-201ENST00000543233 CCL4L1Q8NHW4 92 aa10.26□□□□□ -0.77
CDH4-201ENST00000543233 C16orf58Q96GQ5 468 aa10.26□□□□□ -0.77
CDH4-201ENST00000543233 KIRREL1Q96J84 757 aa10.26□□□□□ -0.77
CDH4-201ENST00000543233 SELENOIQ9C0D9 397 aa10.26□□□□□ -0.77
CDH4-201ENST00000543233 ATG5Q9H1Y0 275 aa10.26□□□□□ -0.77
CDH4-201ENST00000543233 OR51I1Q9H343 314 aa10.26□□□□□ -0.77
CDH4-201ENST00000543233 CAPN10Q9HC96 672 aa10.26□□□□□ -0.77
CDH4-201ENST00000543233 ASB6Q9NWX5 421 aa10.26□□□□□ -0.77
CDH4-201ENST00000543233 IGKV1-8A0A0C4DH67 115 aa10.25□□□□□ -0.77
CDH4-201ENST00000543233 A0A1W2PPV9 198 aa10.25□□□□□ -0.77
CDH4-201ENST00000543233 C4orf51C9J302 202 aa10.25□□□□□ -0.77
CDH4-201ENST00000543233 NXPH2O95156 264 aa10.25□□□□□ -0.77
CDH4-201ENST00000543233 APODP05090 189 aa10.25□□□□□ -0.77
CDH4-201ENST00000543233 LIPCP11150 499 aa10.25□□□□□ -0.77
CDH4-201ENST00000543233 VASPP50552 380 aaPredicted RBP10.25□□□□□ -0.77
CDH4-201ENST00000543233 RBX1P62877 108 aa10.25□□□□□ -0.77
CDH4-201ENST00000543233 RASGEF1BQ0VAM2 473 aa10.25□□□□□ -0.77
CDH4-201ENST00000543233 OR5I1Q13606 314 aa10.25□□□□□ -0.77
CDH4-201ENST00000543233 PRAMEF17Q5VTA0 474 aa10.25□□□□□ -0.77
CDH4-201ENST00000543233 OR2T2Q6IF00 324 aa10.25□□□□□ -0.77
CDH4-201ENST00000543233 ZNF705AQ6ZN79 300 aaPredicted RBP10.25□□□□□ -0.77
CDH4-201ENST00000543233 ACOT7LQ6ZUV0 252 aa10.25□□□□□ -0.77
CDH4-201ENST00000543233 ZNF765Q7L2R6 523 aa10.25□□□□□ -0.77
CDH4-201ENST00000543233 UBE3DQ7Z6J8 389 aa10.25□□□□□ -0.77
CDH4-201ENST00000543233 OR4N5Q8IXE1 308 aa10.25□□□□□ -0.77
CDH4-201ENST00000543233 CMTM4Q8IZR5 234 aa10.25□□□□□ -0.77
CDH4-201ENST00000543233 GPR32P1Q8NGA4 272 aa10.25□□□□□ -0.77
CDH4-201ENST00000543233 OR52E1Q8NGJ3 308 aa10.25□□□□□ -0.77
CDH4-201ENST00000543233 OR13C5Q8NGS8 318 aa10.25□□□□□ -0.77
CDH4-201ENST00000543233 WDR34Q96EX3 536 aa10.25□□□□□ -0.77
CDH4-201ENST00000543233 COX14Q96I36 57 aa10.25□□□□□ -0.77
CDH4-201ENST00000543233 LINC00615Q96LM1 132 aaPredicted RBP10.25□□□□□ -0.77
CDH4-201ENST00000543233 PTCHD1Q96NR3 888 aa10.25□□□□□ -0.77
CDH4-201ENST00000543233 TAAR9Q96RI9 348 aa10.25□□□□□ -0.77
CDH4-201ENST00000543233 MYADMQ96S97 322 aa10.25□□□□□ -0.77
CDH4-201ENST00000543233 PHPT1Q9NRX4 125 aaPredicted RBP10.25□□□□□ -0.77
CDH4-201ENST00000543233 NOP16Q9Y3C1 178 aaKnown RBP10.25□□□□□ -0.77
CDH4-201ENST00000543233 CHTOPQ9Y3Y2 248 aaKnown RBP10.25□□□□□ -0.77
CDH4-201ENST00000543233 KPTNQ9Y664 436 aa10.25□□□□□ -0.77
CDH4-201ENST00000543233 C9JQL5 133 aa10.25□□□□□ -0.77
CDH4-201ENST00000543233 SFTPBP07988 381 aa10.25□□□□□ -0.77
CDH4-201ENST00000543233 FCARP24071 287 aa10.25□□□□□ -0.77
CDH4-201ENST00000543233 BCL6P41182 706 aa10.25□□□□□ -0.77
CDH4-201ENST00000543233 SLC16A1P53985 500 aa10.25□□□□□ -0.77
CDH4-201ENST00000543233 ID2Q02363 134 aa10.25□□□□□ -0.77
CDH4-201ENST00000543233 SLC25A24Q6NUK1 477 aa10.25□□□□□ -0.77
CDH4-201ENST00000543233 TMEFF1Q8IYR6 380 aa10.25□□□□□ -0.77
CDH4-201ENST00000543233 SHISA5Q8N114 240 aa10.25□□□□□ -0.77
CDH4-201ENST00000543233 ZNF433Q8N7K0 673 aaPredicted RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms