RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 C6orf120Q7Z4R8 191 aa3.95□□□□□ -1.78
LIMS1-214ENST00000542845 KLBQ86Z14 1044 aa3.95□□□□□ -1.78
LIMS1-214ENST00000542845 ZNF584Q8IVC4 421 aa3.95□□□□□ -1.78
LIMS1-214ENST00000542845 GALNT4Q8N4A0 578 aa3.95□□□□□ -1.78
LIMS1-214ENST00000542845 OR2Z1Q8NG97 314 aa3.95□□□□□ -1.78
LIMS1-214ENST00000542845 OR4F17Q8NGA8 305 aa3.95□□□□□ -1.78
LIMS1-214ENST00000542845 FAM76AQ8TAV0 307 aa3.95□□□□□ -1.78
LIMS1-214ENST00000542845 ACTRT1Q8TDG2 376 aa3.95□□□□□ -1.78
LIMS1-214ENST00000542845 IPCEF1Q8WWN9 437 aaPredicted RBP3.95□□□□□ -1.78
LIMS1-214ENST00000542845 CFHR4Q92496 578 aa3.95□□□□□ -1.78
LIMS1-214ENST00000542845 NEIL1Q96FI4 390 aaPredicted RBP3.95□□□□□ -1.78
LIMS1-214ENST00000542845 PLEKHA8Q96JA3 519 aa3.95□□□□□ -1.78
LIMS1-214ENST00000542845 OXGR1Q96P68 337 aa3.95□□□□□ -1.78
LIMS1-214ENST00000542845 TMEM237Q96Q45 408 aa3.95□□□□□ -1.78
LIMS1-214ENST00000542845 OR2M2Q96R28 347 aa3.95□□□□□ -1.78
LIMS1-214ENST00000542845 OR4F4Q96R69 305 aa3.95□□□□□ -1.78
LIMS1-214ENST00000542845 ZNF382Q96SR6 550 aa3.95□□□□□ -1.78
LIMS1-214ENST00000542845 ARHGDIGQ99819 225 aa3.95□□□□□ -1.78
LIMS1-214ENST00000542845 MRPL57Q9BQC6 102 aaKnown RBP3.95□□□□□ -1.78
LIMS1-214ENST00000542845 ULBP2Q9BZM5 246 aa3.95□□□□□ -1.78
LIMS1-214ENST00000542845 BCL2L14Q9BZR8 327 aa3.95□□□□□ -1.78
LIMS1-214ENST00000542845 DPY30Q9C005 99 aa3.95□□□□□ -1.78
LIMS1-214ENST00000542845 LRMDAQ9H2I8 198 aa3.95□□□□□ -1.78
LIMS1-214ENST00000542845 MRPL46Q9H2W6 279 aaKnown RBP3.95□□□□□ -1.78
LIMS1-214ENST00000542845 OR51I1Q9H343 314 aa3.95□□□□□ -1.78
LIMS1-214ENST00000542845 ZNF224Q9NZL3 707 aa3.95□□□□□ -1.78
LIMS1-214ENST00000542845 DNAJB11Q9UBS4 358 aa3.95□□□□□ -1.78
LIMS1-214ENST00000542845 MIOXQ9UGB7 285 aa3.95□□□□□ -1.78
LIMS1-214ENST00000542845 PPP1R3CQ9UQK1 317 aa3.95□□□□□ -1.78
LIMS1-214ENST00000542845 WDR45Q9Y484 360 aa3.95□□□□□ -1.78
LIMS1-214ENST00000542845 JRKLQ9Y4A0 524 aa3.95□□□□□ -1.78
LIMS1-214ENST00000542845 DNAH9Q9NYC9 4486 aa3.95□□□□□ -1.78
LIMS1-214ENST00000542845 IGHV1-69DA0A0B4J2H0 117 aa3.94□□□□□ -1.78
LIMS1-214ENST00000542845 CFAP73A6NFT4 308 aa3.94□□□□□ -1.78
LIMS1-214ENST00000542845 ZNF726A6NNF4 738 aa3.94□□□□□ -1.78
LIMS1-214ENST00000542845 P2RY10O00398 339 aa3.94□□□□□ -1.78
LIMS1-214ENST00000542845 TP73O15350 636 aa3.94□□□□□ -1.78
LIMS1-214ENST00000542845 RAD51CO43502 376 aa3.94□□□□□ -1.78
LIMS1-214ENST00000542845 AKAP8O43823 692 aaKnown RBP3.94□□□□□ -1.78
LIMS1-214ENST00000542845 TIMM8AO60220 97 aaPredicted RBP3.94□□□□□ -1.78
LIMS1-214ENST00000542845 AHSA1O95433 338 aa3.94□□□□□ -1.78
LIMS1-214ENST00000542845 CYB5R3P00387 301 aaPredicted RBP3.94□□□□□ -1.78
LIMS1-214ENST00000542845 IGHV1-69P01742 117 aa3.94□□□□□ -1.78
LIMS1-214ENST00000542845 INHBAP08476 426 aa3.94□□□□□ -1.78
LIMS1-214ENST00000542845 SBK3P0C264 359 aa3.94□□□□□ -1.78
LIMS1-214ENST00000542845 LAMP1P11279 417 aa3.94□□□□□ -1.78
LIMS1-214ENST00000542845 HLA-DOBP13765 273 aa3.94□□□□□ -1.78
LIMS1-214ENST00000542845 UQCRBP14927 111 aa3.94□□□□□ -1.78
LIMS1-214ENST00000542845 NQO1P15559 274 aaKnown RBP3.94□□□□□ -1.78
LIMS1-214ENST00000542845 IL7RP16871 459 aa3.94□□□□□ -1.78
LIMS1-214ENST00000542845 SDC1P18827 310 aa3.94□□□□□ -1.78
LIMS1-214ENST00000542845 TNFRSF1AP19438 455 aa3.94□□□□□ -1.78
LIMS1-214ENST00000542845 NCF2P19878 526 aaPredicted RBP3.94□□□□□ -1.78
LIMS1-214ENST00000542845 IMPDH1P20839 514 aa3.94□□□□□ -1.78
LIMS1-214ENST00000542845 LMO1P25800 156 aa3.94□□□□□ -1.78
LIMS1-214ENST00000542845 APLNRP35414 380 aa3.94□□□□□ -1.78
LIMS1-214ENST00000542845 HPCAL1P37235 193 aa3.94□□□□□ -1.78
LIMS1-214ENST00000542845 MAGEA4P43358 317 aa3.94□□□□□ -1.78
LIMS1-214ENST00000542845 CCT5P48643 541 aa3.94□□□□□ -1.78
LIMS1-214ENST00000542845 PITPNBP48739 271 aa3.94□□□□□ -1.78
LIMS1-214ENST00000542845 PKNOX1P55347 436 aa3.94□□□□□ -1.78
LIMS1-214ENST00000542845 ERVFRD-1P60508 538 aa3.94□□□□□ -1.78
LIMS1-214ENST00000542845 COPZ1P61923 177 aa3.94□□□□□ -1.78
LIMS1-214ENST00000542845 ARF6P62330 175 aa3.94□□□□□ -1.78
LIMS1-214ENST00000542845 RPL38P63173 70 aaKnown RBP3.94□□□□□ -1.78
LIMS1-214ENST00000542845 PRB3Q04118 309 aaPredicted RBP3.94□□□□□ -1.78
LIMS1-214ENST00000542845 PLP2Q04941 152 aa3.94□□□□□ -1.78
LIMS1-214ENST00000542845 PMS2P11Q13670 270 aa3.94□□□□□ -1.78
LIMS1-214ENST00000542845 BLMHQ13867 455 aa3.94□□□□□ -1.78
LIMS1-214ENST00000542845 LY6EQ16553 131 aa3.94□□□□□ -1.78
LIMS1-214ENST00000542845 LSM12Q3MHD2 195 aaKnown RBP3.94□□□□□ -1.78
LIMS1-214ENST00000542845 ATAD3BQ5T9A4 648 aa3.94□□□□□ -1.78
LIMS1-214ENST00000542845 LIPMQ5VYY2 423 aa3.94□□□□□ -1.78
LIMS1-214ENST00000542845 TYW3Q6IPR3 259 aaKnown RBP3.94□□□□□ -1.78
LIMS1-214ENST00000542845 TNFAIP8L2Q6P589 184 aaPredicted RBP3.94□□□□□ -1.78
LIMS1-214ENST00000542845 LYPD2Q6UXB3 125 aa3.94□□□□□ -1.78
LIMS1-214ENST00000542845 ZCCHC23Q6ZST2 131 aa3.94□□□□□ -1.78
LIMS1-214ENST00000542845 CYS1Q717R9 158 aa3.94□□□□□ -1.78
LIMS1-214ENST00000542845 SNX32Q86XE0 403 aa3.94□□□□□ -1.78
LIMS1-214ENST00000542845 VRK2Q86Y07 508 aa3.94□□□□□ -1.78
LIMS1-214ENST00000542845 UEVLDQ8IX04 471 aa3.94□□□□□ -1.78
LIMS1-214ENST00000542845 C20orf196Q8IYI0 205 aa3.94□□□□□ -1.78
LIMS1-214ENST00000542845 TMEM123Q8N131 208 aa3.94□□□□□ -1.78
LIMS1-214ENST00000542845 PQLC1Q8N2U9 271 aa3.94□□□□□ -1.78
LIMS1-214ENST00000542845 LRRC18Q8N456 261 aa3.94□□□□□ -1.78
LIMS1-214ENST00000542845 FITM2Q8N6M3 262 aa3.94□□□□□ -1.78
LIMS1-214ENST00000542845 STPG3Q8N7X2 389 aa3.94□□□□□ -1.78
LIMS1-214ENST00000542845 OR8B3Q8NGG8 313 aa3.94□□□□□ -1.78
LIMS1-214ENST00000542845 OR1J2Q8NGS2 313 aa3.94□□□□□ -1.78
LIMS1-214ENST00000542845 OR2T6Q8NHC8 308 aa3.94□□□□□ -1.78
LIMS1-214ENST00000542845 ZNF420Q8TAQ5 688 aaPredicted RBP3.94□□□□□ -1.78
LIMS1-214ENST00000542845 SLC25A40Q8TBP6 338 aa3.94□□□□□ -1.78
LIMS1-214ENST00000542845 PNPT1Q8TCS8 783 aaKnown RBP3.94□□□□□ -1.78
LIMS1-214ENST00000542845 ITLN1Q8WWA0 313 aa3.94□□□□□ -1.78
LIMS1-214ENST00000542845 OR5P2Q8WZ92 322 aa3.94□□□□□ -1.78
LIMS1-214ENST00000542845 ROPN1LQ96C74 230 aa3.94□□□□□ -1.78
LIMS1-214ENST00000542845 TXNDC15Q96J42 360 aa3.94□□□□□ -1.78
LIMS1-214ENST00000542845 SLC35G5Q96KT7 338 aa3.94□□□□□ -1.78
LIMS1-214ENST00000542845 TECTBQ96PL2 329 aa3.94□□□□□ -1.78
LIMS1-214ENST00000542845 OR8B2Q96RD0 313 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms