RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 LIM2P55344 173 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 HHEXQ03014 270 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 NCMAPQ5T1S8 102 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 FAM27D1Q5T7N8 215 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 FAM111BQ6SJ93 734 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 GSG1LQ6UXU4 331 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 TMPRSS11FQ6ZWK6 438 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 ABHD13Q7L211 337 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 OR4F15Q8NGB8 312 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 OR5D16Q8NGK9 328 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 OR56B4Q8NH76 319 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 CLDN23Q96B33 292 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 ZNF48Q96MX3 618 aaPredicted RBP7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 INTS14Q96SY0 518 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 OR51I1Q9H343 314 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 HRASLS2Q9NWW9 162 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 TRPC4Q9UBN4 977 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 METTL1Q9UBP6 276 aaKnown RBP7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 MRPS17Q9Y2R5 130 aaKnown RBP7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 ZNF281Q9Y2X9 895 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 OR10H1Q9Y4A9 318 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 TMEM131Q92545 1883 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 EML5Q05BV3 1969 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 OR2W5A6NFC9 320 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 B4DGG1 531 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 H0YGG7 62 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 CCSO14618 274 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 FFAR1O14842 300 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 ARPC1BO15143 372 aaKnown RBP7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 SUSD5O60279 629 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 FZD7O75084 574 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 ADAP00813 363 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 CELA3AP09093 270 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 C8orf89P0DMQ9 161 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 ALPPL2P10696 532 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 CD38P28907 300 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 SHC1P29353 583 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 BLKP51451 505 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 ARF3P61204 181 aaPredicted RBP7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 TGM3Q08188 693 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 TMEM201Q5SNT2 666 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 FAHD2BQ6P2I3 314 aaPredicted RBP7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 SLC16A14Q7RTX9 510 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 PRSS41Q7RTY9 318 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 OAFQ86UD1 273 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 NAA40Q86UY6 237 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 C17orf82Q86X59 251 aaPredicted RBP7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 MAML2Q8IZL2 1156 aaPredicted RBP7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 OR10K1Q8NGX5 313 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 FAHD2AQ96GK7 314 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 SLC35G5Q96KT7 338 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 CSTL1Q9H114 145 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 IL21RQ9HBE5 538 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 GDF2Q9UK05 429 aaPredicted RBP7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 TEX13DA0A0J9YY54 714 aaPredicted RBP7.25□□□□□ -1.25
PDLIM5-221ENST00000542407 KRT33AO76009 404 aa7.25□□□□□ -1.25
PDLIM5-221ENST00000542407 CH25HO95992 272 aa7.25□□□□□ -1.25
PDLIM5-221ENST00000542407 CTSBP07858 339 aa7.25□□□□□ -1.25
PDLIM5-221ENST00000542407 LIMS3P0CW19 117 aa7.25□□□□□ -1.25
PDLIM5-221ENST00000542407 LIMS4P0CW20 117 aa7.25□□□□□ -1.25
PDLIM5-221ENST00000542407 CTSEP14091 401 aa7.25□□□□□ -1.25
PDLIM5-221ENST00000542407 PTNP21246 168 aa7.25□□□□□ -1.25
PDLIM5-221ENST00000542407 RBMS1P29558 406 aaKnown RBP7.25□□□□□ -1.25
PDLIM5-221ENST00000542407 MTNR1AP48039 350 aa7.25□□□□□ -1.25
PDLIM5-221ENST00000542407 FABP9Q0Z7S8 132 aa7.25□□□□□ -1.25
PDLIM5-221ENST00000542407 DUSP8Q13202 625 aa7.25□□□□□ -1.25
PDLIM5-221ENST00000542407 SYPL1Q16563 259 aa7.25□□□□□ -1.25
PDLIM5-221ENST00000542407 PLEKHN1Q494U1 663 aaPredicted RBP7.25□□□□□ -1.25
PDLIM5-221ENST00000542407 DEFB134Q4QY38 66 aa7.25□□□□□ -1.25
PDLIM5-221ENST00000542407 CLEC12AQ5QGZ9 265 aa7.25□□□□□ -1.25
PDLIM5-221ENST00000542407 C12orf73Q69YU5 71 aa7.25□□□□□ -1.25
PDLIM5-221ENST00000542407 ZNF770Q6IQ21 691 aaPredicted RBP7.25□□□□□ -1.25
PDLIM5-221ENST00000542407 BAIAP2L2Q6UXY1 529 aa7.25□□□□□ -1.25
PDLIM5-221ENST00000542407 RBM45Q8IUH3 476 aaKnown RBP7.25□□□□□ -1.25
PDLIM5-221ENST00000542407 CPOQ8IVL8 374 aa7.25□□□□□ -1.25
PDLIM5-221ENST00000542407 SLITRK4Q8IW52 837 aa7.25□□□□□ -1.25
PDLIM5-221ENST00000542407 PXT1Q8NFP0 134 aa7.25□□□□□ -1.25
PDLIM5-221ENST00000542407 OR13C2Q8NGS9 318 aa7.25□□□□□ -1.25
PDLIM5-221ENST00000542407 ZCCHC10Q8TBK6 192 aa7.25□□□□□ -1.25
PDLIM5-221ENST00000542407 CORO2AQ92828 525 aa7.25□□□□□ -1.25
PDLIM5-221ENST00000542407 WFDC6Q9BQY6 131 aa7.25□□□□□ -1.25
PDLIM5-221ENST00000542407 GINS4Q9BRT9 223 aa7.25□□□□□ -1.25
PDLIM5-221ENST00000542407 SPATA5L1Q9BVQ7 753 aa7.25□□□□□ -1.25
PDLIM5-221ENST00000542407 FAM60AQ9NP50 221 aa7.25□□□□□ -1.25
PDLIM5-221ENST00000542407 TESQ9UGI8 421 aaKnown RBP7.25□□□□□ -1.25
PDLIM5-221ENST00000542407 DAPP1Q9UN19 280 aa7.25□□□□□ -1.25
PDLIM5-221ENST00000542407 hCG_1809904A0A1W2PP81 198 aa7.25□□□□□ -1.25
PDLIM5-221ENST00000542407 A0A1W2PPE2 198 aa7.25□□□□□ -1.25
PDLIM5-221ENST00000542407 A0A1W2PR64 198 aa7.25□□□□□ -1.25
PDLIM5-221ENST00000542407 C1orf196B1AJZ1 125 aa7.25□□□□□ -1.25
PDLIM5-221ENST00000542407 K7ESF4 209 aa7.25□□□□□ -1.25
PDLIM5-221ENST00000542407 SLC28A2O43868 658 aa7.25□□□□□ -1.25
PDLIM5-221ENST00000542407 RAD1O60671 282 aa7.25□□□□□ -1.25
PDLIM5-221ENST00000542407 NME6O75414 186 aaPredicted RBP7.25□□□□□ -1.25
PDLIM5-221ENST00000542407 RGS9O75916 674 aaPredicted RBP7.25□□□□□ -1.25
PDLIM5-221ENST00000542407 EPPINO95925 133 aa7.25□□□□□ -1.25
PDLIM5-221ENST00000542407 CSNK2A2P19784 350 aaPredicted RBP7.25□□□□□ -1.25
PDLIM5-221ENST00000542407 MC5RP33032 325 aa7.25□□□□□ -1.25
PDLIM5-221ENST00000542407 FASLGP48023 281 aa7.25□□□□□ -1.25
PDLIM5-221ENST00000542407 HMGA2P52926 109 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms