RNA–Protein interactions for RNA: ENST00000541108.1

CLIP1-215, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 1 (best)

Gene CLIP1, Length 1,658 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-215ENST00000541108 OR10H5Q8NGA6 315 aa15.68■□□□□ 0.1
CLIP1-215ENST00000541108 THEM6Q8WUY1 208 aa15.68■□□□□ 0.1
CLIP1-215ENST00000541108 C11orf40Q8WZ69 217 aa15.68■□□□□ 0.1
CLIP1-215ENST00000541108 UFD1Q92890 307 aa15.68■□□□□ 0.1
CLIP1-215ENST00000541108 TTYH2Q9BSA4 534 aa15.68■□□□□ 0.1
CLIP1-215ENST00000541108 CDADC1Q9BWV3 514 aa15.68■□□□□ 0.1
CLIP1-215ENST00000541108 NAA50Q9GZZ1 169 aaKnown RBP15.68■□□□□ 0.1
CLIP1-215ENST00000541108 SEC61A2Q9H9S3 476 aa15.68■□□□□ 0.1
CLIP1-215ENST00000541108 UGT2A1Q9Y4X1 527 aa15.68■□□□□ 0.1
CLIP1-215ENST00000541108 A0A1W2PPL8 197 aa15.67■□□□□ 0.1
CLIP1-215ENST00000541108 SPARCP09486 303 aa15.67■□□□□ 0.1
CLIP1-215ENST00000541108 ZNF84P51523 738 aa15.67■□□□□ 0.1
CLIP1-215ENST00000541108 LSM6P62312 80 aaKnown RBP15.67■□□□□ 0.1
CLIP1-215ENST00000541108 ROM1Q03395 351 aa15.67■□□□□ 0.1
CLIP1-215ENST00000541108 STK11Q15831 433 aa15.67■□□□□ 0.1
CLIP1-215ENST00000541108 CTF1Q16619 201 aa15.67■□□□□ 0.1
CLIP1-215ENST00000541108 MEP1BQ16820 701 aa15.67■□□□□ 0.1
CLIP1-215ENST00000541108 LIPKQ5VXJ0 399 aa15.67■□□□□ 0.1
CLIP1-215ENST00000541108 KCTD18Q6PI47 426 aaPredicted RBP15.67■□□□□ 0.1
CLIP1-215ENST00000541108 RHOUQ7L0Q8 258 aa15.67■□□□□ 0.1
CLIP1-215ENST00000541108 CPT1CQ8TCG5 803 aa15.67■□□□□ 0.1
CLIP1-215ENST00000541108 C12orf43Q96C57 262 aaKnown RBP15.67■□□□□ 0.1
CLIP1-215ENST00000541108 GMPPAQ96IJ6 420 aaPredicted RBP15.67■□□□□ 0.1
CLIP1-215ENST00000541108 SLCO5A1Q9H2Y9 848 aa15.67■□□□□ 0.1
CLIP1-215ENST00000541108 NELFAQ9H3P2 528 aa15.67■□□□□ 0.1
CLIP1-215ENST00000541108 PRORYQ9H606 182 aa15.67■□□□□ 0.1
CLIP1-215ENST00000541108 CALHM2Q9HA72 323 aa15.67■□□□□ 0.1
CLIP1-215ENST00000541108 LUZP4Q9P127 313 aa15.67■□□□□ 0.1
CLIP1-215ENST00000541108 CYB5R1Q9UHQ9 305 aa15.67■□□□□ 0.1
CLIP1-215ENST00000541108 KLHDC2Q9Y2U9 406 aa15.67■□□□□ 0.1
CLIP1-215ENST00000541108 H3BMQ9 156 aa15.67■□□□□ 0.1
CLIP1-215ENST00000541108 UPK3AO75631 287 aa15.67■□□□□ 0.1
CLIP1-215ENST00000541108 KRT8P05787 483 aa15.67■□□□□ 0.1
CLIP1-215ENST00000541108 CD53P19397 219 aa15.67■□□□□ 0.1
CLIP1-215ENST00000541108 RPS27P42677 84 aaKnown RBP15.67■□□□□ 0.1
CLIP1-215ENST00000541108 GBX2P52951 348 aaPredicted RBP15.67■□□□□ 0.1
CLIP1-215ENST00000541108 MRPS34P82930 218 aaKnown RBP15.67■□□□□ 0.1
CLIP1-215ENST00000541108 TP53I3Q53FA7 332 aa15.67■□□□□ 0.1
CLIP1-215ENST00000541108 PLXDC2Q6UX71 529 aa15.67■□□□□ 0.1
CLIP1-215ENST00000541108 GDPGP1Q6ZNW5 385 aa15.67■□□□□ 0.1
CLIP1-215ENST00000541108 P4HA3Q7Z4N8 544 aa15.67■□□□□ 0.1
CLIP1-215ENST00000541108 ALDH16A1Q8IZ83 802 aa15.67■□□□□ 0.1
CLIP1-215ENST00000541108 WNT2BQ93097 391 aa15.67■□□□□ 0.1
CLIP1-215ENST00000541108 PELI1Q96FA3 418 aa15.67■□□□□ 0.1
CLIP1-215ENST00000541108 RBM24Q9BX46 236 aaKnown RBP15.67■□□□□ 0.1
CLIP1-215ENST00000541108 CRLF2Q9HC73 371 aa15.67■□□□□ 0.1
CLIP1-215ENST00000541108 POLE4Q9NR33 117 aa15.67■□□□□ 0.1
CLIP1-215ENST00000541108 TRIM64BA6NI03 449 aa15.66■□□□□ 0.1
CLIP1-215ENST00000541108 METTL15A6NJ78 407 aa15.66■□□□□ 0.1
CLIP1-215ENST00000541108 PLPP2O43688 288 aa15.66■□□□□ 0.1
CLIP1-215ENST00000541108 AIREO43918 545 aa15.66■□□□□ 0.1
CLIP1-215ENST00000541108 PSKH1P11801 424 aa15.66■□□□□ 0.1
CLIP1-215ENST00000541108 GABRA1P14867 456 aa15.66■□□□□ 0.1
CLIP1-215ENST00000541108 CELP19835 753 aa15.66■□□□□ 0.1
CLIP1-215ENST00000541108 NPR2P20594 1047 aa15.66■□□□□ 0.1
CLIP1-215ENST00000541108 PTGER4P35408 488 aa15.66■□□□□ 0.1
CLIP1-215ENST00000541108 SIRPAP78324 504 aa15.66■□□□□ 0.1
CLIP1-215ENST00000541108 CNPY1Q3B7I2 92 aa15.66■□□□□ 0.1
CLIP1-215ENST00000541108 DEGS2Q6QHC5 323 aa15.66■□□□□ 0.1
CLIP1-215ENST00000541108 FAM220AQ7Z4H9 259 aa15.66■□□□□ 0.1
CLIP1-215ENST00000541108 ZNF679Q8IYX0 411 aa15.66■□□□□ 0.1
CLIP1-215ENST00000541108 TEX19Q8NA77 164 aa15.66■□□□□ 0.1
CLIP1-215ENST00000541108 ABHD6Q9BV23 337 aa15.66■□□□□ 0.1
CLIP1-215ENST00000541108 MROQ9BYG7 248 aa15.66■□□□□ 0.1
CLIP1-215ENST00000541108 GNG8Q9UK08 70 aa15.66■□□□□ 0.1
CLIP1-215ENST00000541108 PHF3Q92576 2039 aaKnown RBP15.65■□□□□ 0.1
CLIP1-215ENST00000541108 ATMQ13315 3056 aa15.65■□□□□ 0.1
CLIP1-215ENST00000541108 CD8B2A6NJW9 211 aa15.65■□□□□ 0.1
CLIP1-215ENST00000541108 RPL36A-HNRNPH2H7BZ11 118 aa15.65■□□□□ 0.1
CLIP1-215ENST00000541108 SS18L1O75177 396 aaPredicted RBP15.65■□□□□ 0.1
CLIP1-215ENST00000541108 MSR1P21757 451 aa15.65■□□□□ 0.1
CLIP1-215ENST00000541108 CDAP32320 146 aa15.65■□□□□ 0.1
CLIP1-215ENST00000541108 TGM4P49221 684 aa15.65■□□□□ 0.1
CLIP1-215ENST00000541108 EIF2B1Q14232 305 aaKnown RBP15.65■□□□□ 0.1
CLIP1-215ENST00000541108 NRN1LQ496H8 165 aa15.65■□□□□ 0.1
CLIP1-215ENST00000541108 FAM27BQ5VT28 67 aa15.65■□□□□ 0.1
CLIP1-215ENST00000541108 RPL22L1Q6P5R6 122 aaKnown RBP15.65■□□□□ 0.1
CLIP1-215ENST00000541108 FGD2Q7Z6J4 655 aa15.65■□□□□ 0.1
CLIP1-215ENST00000541108 OR5M9Q8NGP3 310 aa15.65■□□□□ 0.1
CLIP1-215ENST00000541108 OR52N5Q8NH56 324 aa15.65■□□□□ 0.1
CLIP1-215ENST00000541108 ST7LQ8TDW4 575 aa15.65■□□□□ 0.1
CLIP1-215ENST00000541108 APH1AQ96BI3 265 aa15.65■□□□□ 0.1
CLIP1-215ENST00000541108 OR8B4Q96RC9 309 aa15.65■□□□□ 0.1
CLIP1-215ENST00000541108 TRIB1Q96RU8 372 aa15.65■□□□□ 0.1
CLIP1-215ENST00000541108 MRM2Q9UI43 246 aaKnown RBP15.65■□□□□ 0.1
CLIP1-215ENST00000541108 SF3B6Q9Y3B4 125 aaKnown RBP15.65■□□□□ 0.1
CLIP1-215ENST00000541108 BOD1L1Q8NFC6 3051 aa15.65■□□□□ 0.1
CLIP1-215ENST00000541108 PRR32B1ATL7 298 aa15.64■□□□□ 0.09
CLIP1-215ENST00000541108 SLC22A1O15245 554 aa15.64■□□□□ 0.09
CLIP1-215ENST00000541108 MAGEB4O15481 346 aaPredicted RBP15.64■□□□□ 0.09
CLIP1-215ENST00000541108 OGG1O15527 345 aa15.64■□□□□ 0.09
CLIP1-215ENST00000541108 WDR1O75083 606 aa15.64■□□□□ 0.09
CLIP1-215ENST00000541108 ZNF254O75437 659 aa15.64■□□□□ 0.09
CLIP1-215ENST00000541108 ABHD16AO95870 558 aa15.64■□□□□ 0.09
CLIP1-215ENST00000541108 CD1AP06126 327 aa15.64■□□□□ 0.09
CLIP1-215ENST00000541108 SFTPCP11686 197 aa15.64■□□□□ 0.09
CLIP1-215ENST00000541108 GADD45AP24522 165 aa15.64■□□□□ 0.09
CLIP1-215ENST00000541108 AGTR1P30556 359 aa15.64■□□□□ 0.09
CLIP1-215ENST00000541108 GABRA5P31644 462 aa15.64■□□□□ 0.09
CLIP1-215ENST00000541108 GTF3C1Q12789 2109 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms