RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 KCTD9Q7L273 389 aa9.34□□□□□ -0.91
CDC42SE1-207ENST00000540998 LINC00346Q8IVM7 164 aa9.34□□□□□ -0.91
CDC42SE1-207ENST00000540998 C12orf45Q8N5I9 185 aaPredicted RBP9.34□□□□□ -0.91
CDC42SE1-207ENST00000540998 OR13H1Q8NG92 308 aa9.34□□□□□ -0.91
CDC42SE1-207ENST00000540998 OR1S2Q8NGQ3 325 aa9.34□□□□□ -0.91
CDC42SE1-207ENST00000540998 ZNF578Q96N58 590 aaPredicted RBP9.34□□□□□ -0.91
CDC42SE1-207ENST00000540998 ZNF768Q9H5H4 540 aaKnown RBP9.34□□□□□ -0.91
CDC42SE1-207ENST00000540998 ASF1BQ9NVP2 202 aa9.34□□□□□ -0.91
CDC42SE1-207ENST00000540998 WDFY4Q6ZS81 3184 aa9.34□□□□□ -0.91
CDC42SE1-207ENST00000540998 CPED1A4D0V7 1026 aa9.34□□□□□ -0.91
CDC42SE1-207ENST00000540998 C2orf72A6NCS6 295 aa9.34□□□□□ -0.91
CDC42SE1-207ENST00000540998 WIPF3A6NGB9 483 aa9.34□□□□□ -0.91
CDC42SE1-207ENST00000540998 HMSDA8MTL9 139 aa9.34□□□□□ -0.91
CDC42SE1-207ENST00000540998 EEF1E1-BLOC1S5C9J1V9 151 aa9.34□□□□□ -0.91
CDC42SE1-207ENST00000540998 PRAMEF2O60811 474 aa9.34□□□□□ -0.91
CDC42SE1-207ENST00000540998 AK1P00568 194 aa9.34□□□□□ -0.91
CDC42SE1-207ENST00000540998 HLA-AP01891 365 aaKnown RBP9.34□□□□□ -0.91
CDC42SE1-207ENST00000540998 IL11P20809 199 aa9.34□□□□□ -0.91
CDC42SE1-207ENST00000540998 C4BPBP20851 252 aa9.34□□□□□ -0.91
CDC42SE1-207ENST00000540998 FAUP35544 74 aaKnown RBP9.34□□□□□ -0.91
CDC42SE1-207ENST00000540998 MNDAP41218 407 aa9.34□□□□□ -0.91
CDC42SE1-207ENST00000540998 STARP49675 285 aa9.34□□□□□ -0.91
CDC42SE1-207ENST00000540998 RAB38P57729 211 aa9.34□□□□□ -0.91
CDC42SE1-207ENST00000540998 UBE2IP63279 158 aaKnown RBP9.34□□□□□ -0.91
CDC42SE1-207ENST00000540998 ZNF141Q15928 474 aa9.34□□□□□ -0.91
CDC42SE1-207ENST00000540998 SLC35D3Q5M8T2 416 aa9.34□□□□□ -0.91
CDC42SE1-207ENST00000540998 ATG4DQ86TL0 474 aaPredicted RBP9.34□□□□□ -0.91
CDC42SE1-207ENST00000540998 NUDCD2Q8WVJ2 157 aa9.34□□□□□ -0.91
CDC42SE1-207ENST00000540998 ELSPBP1Q96BH3 223 aa9.34□□□□□ -0.91
CDC42SE1-207ENST00000540998 INTS14Q96SY0 518 aa9.34□□□□□ -0.91
CDC42SE1-207ENST00000540998 LMF2Q9BU23 707 aaKnown RBP9.34□□□□□ -0.91
CDC42SE1-207ENST00000540998 OR11A1Q9GZK7 315 aa9.34□□□□□ -0.91
CDC42SE1-207ENST00000540998 OR8D2Q9GZM6 311 aa9.34□□□□□ -0.91
CDC42SE1-207ENST00000540998 NXF5Q9H1B4 397 aaKnown RBP9.34□□□□□ -0.91
CDC42SE1-207ENST00000540998 PNO1Q9NRX1 252 aaKnown RBP9.34□□□□□ -0.91
CDC42SE1-207ENST00000540998 MSRAQ9UJ68 235 aa9.34□□□□□ -0.91
CDC42SE1-207ENST00000540998 TMED7Q9Y3B3 224 aa9.34□□□□□ -0.91
CDC42SE1-207ENST00000540998 OR6C76A6NM76 312 aa9.34□□□□□ -0.91
CDC42SE1-207ENST00000540998 B4DGG1 531 aa9.34□□□□□ -0.91
CDC42SE1-207ENST00000540998 SLC16A7O60669 478 aa9.34□□□□□ -0.91
CDC42SE1-207ENST00000540998 CSF1P09603 554 aa9.34□□□□□ -0.91
CDC42SE1-207ENST00000540998 IL32P24001 234 aa9.34□□□□□ -0.91
CDC42SE1-207ENST00000540998 CSF2RBP32927 897 aa9.34□□□□□ -0.91
CDC42SE1-207ENST00000540998 EIF1AXP47813 144 aaKnown RBP9.34□□□□□ -0.91
CDC42SE1-207ENST00000540998 TMEM240Q5SV17 173 aa9.34□□□□□ -0.91
CDC42SE1-207ENST00000540998 Q6ZSR6 202 aa9.34□□□□□ -0.91
CDC42SE1-207ENST00000540998 OR2W3Q7Z3T1 314 aa9.34□□□□□ -0.91
CDC42SE1-207ENST00000540998 SLC22A18ASQ8N1D0 253 aa9.34□□□□□ -0.91
CDC42SE1-207ENST00000540998 ZSCAN1Q8NBB4 408 aa9.34□□□□□ -0.91
CDC42SE1-207ENST00000540998 OR13C8Q8NGS7 320 aa9.34□□□□□ -0.91
CDC42SE1-207ENST00000540998 GPR119Q8TDV5 335 aa9.34□□□□□ -0.91
CDC42SE1-207ENST00000540998 PPP1R1CQ8WVI7 109 aa9.34□□□□□ -0.91
CDC42SE1-207ENST00000540998 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.34□□□□□ -0.91
CDC42SE1-207ENST00000540998 MCHR2Q969V1 340 aa9.34□□□□□ -0.91
CDC42SE1-207ENST00000540998 DGAT2Q96PD7 388 aa9.34□□□□□ -0.91
CDC42SE1-207ENST00000540998 MESP1Q9BRJ9 268 aa9.34□□□□□ -0.91
CDC42SE1-207ENST00000540998 ZNF416Q9BWM5 594 aa9.34□□□□□ -0.91
CDC42SE1-207ENST00000540998 BARX1Q9HBU1 254 aaPredicted RBP9.34□□□□□ -0.91
CDC42SE1-207ENST00000540998 VSIG4Q9Y279 399 aa9.34□□□□□ -0.91
CDC42SE1-207ENST00000540998 HIF3AQ9Y2N7 669 aa9.34□□□□□ -0.91
CDC42SE1-207ENST00000540998 KCNJ13O60928 360 aa9.33□□□□□ -0.92
CDC42SE1-207ENST00000540998 HLA-DOBP13765 273 aa9.33□□□□□ -0.92
CDC42SE1-207ENST00000540998 CTLA4P16410 223 aa9.33□□□□□ -0.92
CDC42SE1-207ENST00000540998 VAMP1P23763 118 aa9.33□□□□□ -0.92
CDC42SE1-207ENST00000540998 GPR3P46089 330 aa9.33□□□□□ -0.92
CDC42SE1-207ENST00000540998 SKP1P63208 163 aa9.33□□□□□ -0.92
CDC42SE1-207ENST00000540998 FMODQ06828 376 aa9.33□□□□□ -0.92
CDC42SE1-207ENST00000540998 EIF2B1Q14232 305 aaKnown RBP9.33□□□□□ -0.92
CDC42SE1-207ENST00000540998 JMJD6Q6NYC1 403 aaPredicted RBP9.33□□□□□ -0.92
CDC42SE1-207ENST00000540998 ZCCHC12Q6PEW1 402 aa9.33□□□□□ -0.92
CDC42SE1-207ENST00000540998 C16orf47Q6ZP98 133 aaPredicted RBP9.33□□□□□ -0.92
CDC42SE1-207ENST00000540998 ZNF595Q8IYB9 648 aa9.33□□□□□ -0.92
CDC42SE1-207ENST00000540998 MMABQ96EY8 250 aaPredicted RBP9.33□□□□□ -0.92
CDC42SE1-207ENST00000540998 SCARF2Q96GP6 870 aaPredicted RBP9.33□□□□□ -0.92
CDC42SE1-207ENST00000540998 ZNF275Q9NSD4 429 aaPredicted RBP9.33□□□□□ -0.92
CDC42SE1-207ENST00000540998 MRPL22Q9NWU5 206 aaKnown RBP9.33□□□□□ -0.92
CDC42SE1-207ENST00000540998 FBXL21Q9UKT6 434 aa9.33□□□□□ -0.92
CDC42SE1-207ENST00000540998 ETV7Q9Y603 341 aa9.33□□□□□ -0.92
CDC42SE1-207ENST00000540998 RNF222A6NCQ9 220 aa9.33□□□□□ -0.92
CDC42SE1-207ENST00000540998 RFPL4AA6NLU0 287 aa9.33□□□□□ -0.92
CDC42SE1-207ENST00000540998 C2orf74A8MZ97 194 aa9.33□□□□□ -0.92
CDC42SE1-207ENST00000540998 RFPL4AL1F8VTS6 287 aa9.33□□□□□ -0.92
CDC42SE1-207ENST00000540998 EIF4E2O60573 245 aaKnown RBP9.33□□□□□ -0.92
CDC42SE1-207ENST00000540998 DCNP07585 359 aaKnown RBP9.33□□□□□ -0.92
CDC42SE1-207ENST00000540998 ADCYAP1P18509 176 aa9.33□□□□□ -0.92
CDC42SE1-207ENST00000540998 PI3P19957 117 aa9.33□□□□□ -0.92
CDC42SE1-207ENST00000540998 BDKRB2P30411 391 aa9.33□□□□□ -0.92
CDC42SE1-207ENST00000540998 MECP2P51608 486 aaKnown RBP9.33□□□□□ -0.92
CDC42SE1-207ENST00000540998 PRPS1P60891 318 aa9.33□□□□□ -0.92
CDC42SE1-207ENST00000540998 BAMBIQ13145 260 aa9.33□□□□□ -0.92
CDC42SE1-207ENST00000540998 KRT77Q7Z794 578 aa9.33□□□□□ -0.92
CDC42SE1-207ENST00000540998 TMEM200AQ86VY9 491 aa9.33□□□□□ -0.92
CDC42SE1-207ENST00000540998 BPIFB2Q8N4F0 458 aa9.33□□□□□ -0.92
CDC42SE1-207ENST00000540998 ADAD2Q8NCV1 583 aaKnown RBP9.33□□□□□ -0.92
CDC42SE1-207ENST00000540998 OR6K3Q8NGY3 331 aa9.33□□□□□ -0.92
CDC42SE1-207ENST00000540998 ZNF417Q8TAU3 575 aa9.33□□□□□ -0.92
CDC42SE1-207ENST00000540998 TSLPQ969D9 159 aa9.33□□□□□ -0.92
CDC42SE1-207ENST00000540998 MRGPRFQ96AM1 343 aa9.33□□□□□ -0.92
CDC42SE1-207ENST00000540998 CPNE2Q96FN4 548 aaPredicted RBP9.33□□□□□ -0.92
CDC42SE1-207ENST00000540998 CMTM3Q96MX0 182 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms