RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 IGFBP1P08833 259 aaPredicted RBP0.75□□□□□ -2.29
HIF1A-204ENST00000539097 SLC35E2BP0CK96 405 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 SLC35E2P0CK97 266 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 NR2C1P13056 603 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 MAS1LP35410 378 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 DSTNP60981 165 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 MRPS22P82650 360 aaKnown RBP0.75□□□□□ -2.29
HIF1A-204ENST00000539097 PAX2Q02962 417 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 RGS1Q08116 209 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 TGM3Q08188 693 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 C2orf54Q08AI8 447 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 SIGLEC14Q08ET2 396 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 ZNF763Q0D2J5 394 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 FCHO2Q0JRZ9 810 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 IL18R1Q13478 541 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 PARP15Q460N3 678 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 C5orf47Q569G3 176 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 SOHLH1Q5JUK2 328 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 PHYHD1Q5SRE7 291 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 OR2A2Q6IF42 318 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 ANKRD26P1Q6NSI1 321 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 ANGPTL8Q6UXH0 198 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 LINC00336Q6ZUF6 198 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 SLC26A11Q86WA9 606 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 LRRC8AQ8IWT6 810 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 SPANXA2-OT1Q8N9U9 137 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 OR1L4Q8NGR5 311 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 OR2Y1Q8NGV0 311 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 RFESDQ8TAC1 157 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 TYMSOSQ8TAI1 123 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 ITLN1Q8WWA0 313 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 MAIP1Q8WWC4 291 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 TBRG4Q969Z0 631 aaKnown RBP eCLIP0.75□□□□□ -2.292e-8■■■■■ 39.2
HIF1A-204ENST00000539097 ZNF689Q96CS4 500 aaPredicted RBP0.75□□□□□ -2.29
HIF1A-204ENST00000539097 MSANTD3Q96H12 275 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 TIMD4Q96H15 378 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 ZNF599Q96NL3 588 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 TECTBQ96PL2 329 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 ATOH8Q96SQ7 321 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 LRRC19Q9H756 370 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 SUDS3Q9H7L9 328 aaPredicted RBP0.75□□□□□ -2.29
HIF1A-204ENST00000539097 EXOSC4Q9NPD3 245 aaKnown RBP0.75□□□□□ -2.29
HIF1A-204ENST00000539097 C20orf96Q9NUD7 363 aaPredicted RBP0.75□□□□□ -2.29
HIF1A-204ENST00000539097 IMP3Q9NV31 184 aaKnown RBP0.75□□□□□ -2.29
HIF1A-204ENST00000539097 CLN6Q9NWW5 311 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 MARCH5Q9NX47 278 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 PAK5Q9P286 719 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 LGALS13Q9UHV8 139 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 AK6Q9Y3D8 172 aaKnown RBP0.75□□□□□ -2.29
HIF1A-204ENST00000539097 CSDC2Q9Y534 153 aaKnown RBP0.75□□□□□ -2.29
HIF1A-204ENST00000539097 FKBP7Q9Y680 259 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 MAGI3Q5TCQ9 1506 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 ATAD5Q96QE3 1844 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 KIF14Q15058 1648 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 SHANK1Q9Y566 2161 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 COL4A4P53420 1690 aaPredicted RBP0.75□□□□□ -2.29
HIF1A-204ENST00000539097 ARHGAP21Q5T5U3 1957 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 RGPD1P0DJD0 1748 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 QSER1Q2KHR3 1735 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 E9PLD3 99 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 G3V3Y1 287 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 SULT2B1O00204 365 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 PES1O00541 588 aaKnown RBP0.75□□□□□ -2.29
HIF1A-204ENST00000539097 POLR3GO15318 223 aaPredicted RBP0.75□□□□□ -2.29
HIF1A-204ENST00000539097 YKT6O15498 198 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 DFNA5O60443 496 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 GALR3O60755 368 aaPredicted RBP0.75□□□□□ -2.29
HIF1A-204ENST00000539097 TOM1O60784 492 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 NDUFS6O75380 124 aaKnown RBP0.75□□□□□ -2.29
HIF1A-204ENST00000539097 GAS8-AS1O95177 125 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 TBX6O95947 436 aaPredicted RBP0.75□□□□□ -2.29
HIF1A-204ENST00000539097 LGI1O95970 557 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 CD160O95971 181 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 IGHG2P01859 326 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 S100A6P06703 90 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 GP1BAP07359 652 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 PGAM2P15259 253 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 RAB5AP20339 215 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 POLR2GP62487 172 aaKnown RBP eCLIP0.75□□□□□ -2.29
HIF1A-204ENST00000539097 KCNJ2P63252 427 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 PRR3P79522 188 aaKnown RBP0.75□□□□□ -2.29
HIF1A-204ENST00000539097 UNC119Q13432 240 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 RUNX3Q13761 415 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 SLC10A1Q14973 349 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 HADHQ16836 314 aaKnown RBP0.75□□□□□ -2.29
HIF1A-204ENST00000539097 KRTAP21-3Q3LHN1 58 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 SLC22A6Q4U2R8 563 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 HIKESHIQ53FT3 197 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 OR4F3Q6IEY1 312 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 CGB2Q6NT52 195 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 DOK6Q6PKX4 331 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 LYPD2Q6UXB3 125 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 APOOLQ6UXV4 268 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 SH2D6Q7Z4S9 175 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 NUDCD3Q8IVD9 361 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 TTC5Q8N0Z6 440 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 UBE2J2Q8N2K1 259 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 CENPSQ8N2Z9 138 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 TMEM156Q8N614 296 aa0.75□□□□□ -2.29
HIF1A-204ENST00000539097 C14orf178Q8N769 122 aaPredicted RBP0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms