RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 PRSS35Q8N3Z0 413 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 BMPERQ8N8U9 685 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 FADS6Q8N9I5 356 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 ASCC1Q8N9N2 400 aaKnown RBP5.95□□□□□ -1.46
USP28-206ENST00000538224 NOXO1Q8NFA2 376 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 OR2M3Q8NG83 312 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 SYNPRQ8TBG9 265 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 THAP3Q8WTV1 239 aaPredicted RBP5.95□□□□□ -1.46
USP28-206ENST00000538224 HSD17B8Q92506 261 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 MR1Q95460 341 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 PHF21AQ96BD5 680 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 FOXRED1Q96CU9 486 aaPredicted RBP5.95□□□□□ -1.46
USP28-206ENST00000538224 SLC25A38Q96DW6 304 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 RNF31Q96EP0 1072 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 GUCD1Q96NT3 240 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 RASL10BQ96S79 203 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 GFI1Q99684 422 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 KLHDC3Q9BQ90 382 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 ZPBPQ9BS86 351 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 ABHD6Q9BV23 337 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 CACNG6Q9BXT2 260 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 MED28Q9H204 178 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 GALNT9Q9HCQ5 603 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 EMC7Q9NPA0 242 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 MRPL22Q9NWU5 206 aaKnown RBP5.95□□□□□ -1.46
USP28-206ENST00000538224 MED11Q9P086 117 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 KLHL13Q9P2N7 655 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 OR5V1Q9UGF6 321 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 NUFIP1Q9UHK0 495 aaKnown RBP5.95□□□□□ -1.46
USP28-206ENST00000538224 POU2F3Q9UKI9 436 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 FBXO4Q9UKT5 387 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 CLEC4AQ9UMR7 237 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 VDAC3Q9Y277 283 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 COA3Q9Y2R0 106 aaPredicted RBP5.95□□□□□ -1.46
USP28-206ENST00000538224 MRPS7Q9Y2R9 242 aaKnown RBP5.95□□□□□ -1.46
USP28-206ENST00000538224 RBMX2Q9Y388 322 aaKnown RBP5.95□□□□□ -1.46
USP28-206ENST00000538224 LRP12Q9Y561 859 aa5.95□□□□□ -1.46
USP28-206ENST00000538224 EYSQ5T1H1 3165 aa5.94□□□□□ -1.46
USP28-206ENST00000538224 COL27A1Q8IZC6 1860 aaPredicted RBP5.94□□□□□ -1.46
USP28-206ENST00000538224 ASCC3Q8N3C0 2202 aaKnown RBP5.94□□□□□ -1.46
USP28-206ENST00000538224 CABIN1Q9Y6J0 2220 aa5.94□□□□□ -1.46
USP28-206ENST00000538224 IGHV1-45A0A0A0MS14 117 aa5.94□□□□□ -1.46
USP28-206ENST00000538224 LOC100289279A0A1B0GTE1 492 aa5.94□□□□□ -1.46
USP28-206ENST00000538224 ANKRD20A5PA0PJZ0 165 aa5.94□□□□□ -1.46
USP28-206ENST00000538224 GJE1A6NN92 205 aa5.94□□□□□ -1.46
USP28-206ENST00000538224 C17orf51A8MQB3 221 aa5.94□□□□□ -1.46
USP28-206ENST00000538224 ZNF878C9JN71 531 aa5.94□□□□□ -1.46
USP28-206ENST00000538224 SULT1C2O00338 296 aa5.94□□□□□ -1.46
USP28-206ENST00000538224 XRCC3O43542 346 aa5.94□□□□□ -1.46
USP28-206ENST00000538224 DNPH1O43598 174 aa5.94□□□□□ -1.46
USP28-206ENST00000538224 LANCL1O43813 399 aa5.94□□□□□ -1.46
USP28-206ENST00000538224 PEX14O75381 377 aa5.94□□□□□ -1.46
USP28-206ENST00000538224 DKK1O94907 266 aa5.94□□□□□ -1.46
USP28-206ENST00000538224 GLSO94925 669 aaPredicted RBP5.94□□□□□ -1.46
USP28-206ENST00000538224 VAMP5O95183 116 aa5.94□□□□□ -1.46
USP28-206ENST00000538224 PMS2P2O95744 297 aa5.94□□□□□ -1.46
USP28-206ENST00000538224 CSF1P09603 554 aa5.94□□□□□ -1.46
USP28-206ENST00000538224 CD3GP09693 182 aa5.94□□□□□ -1.46
USP28-206ENST00000538224 H2BFMP0C1H6 154 aa5.94□□□□□ -1.46
USP28-206ENST00000538224 ANXA3P12429 323 aa5.94□□□□□ -1.46
USP28-206ENST00000538224 ZNF17P17021 662 aa5.94□□□□□ -1.46
USP28-206ENST00000538224 BTCP35070 178 aa5.94□□□□□ -1.46
USP28-206ENST00000538224 PTGDSP41222 190 aa5.94□□□□□ -1.46
USP28-206ENST00000538224 FOLR3P41439 243 aa5.94□□□□□ -1.46
USP28-206ENST00000538224 DNASE1L1P49184 302 aa5.94□□□□□ -1.46
USP28-206ENST00000538224 MMP16P51512 607 aa5.94□□□□□ -1.46
USP28-206ENST00000538224 SSR4P51571 173 aa5.94□□□□□ -1.46
USP28-206ENST00000538224 TAS2R20P59543 309 aa5.94□□□□□ -1.46
USP28-206ENST00000538224 ACTBP60709 375 aa5.94□□□□□ -1.46
USP28-206ENST00000538224 ACTG1P63261 375 aa5.94□□□□□ -1.46
USP28-206ENST00000538224 SLC35A1P78382 337 aa5.94□□□□□ -1.46
USP28-206ENST00000538224 CD83Q01151 205 aa5.94□□□□□ -1.46
USP28-206ENST00000538224 ZFP36L1Q07352 338 aaKnown RBP5.94□□□□□ -1.46
USP28-206ENST00000538224 DBPQ10586 325 aaPredicted RBP5.94□□□□□ -1.46
USP28-206ENST00000538224 MYBPHQ13203 477 aa5.94□□□□□ -1.46
USP28-206ENST00000538224 EIF3IQ13347 325 aaKnown RBP5.94□□□□□ -1.46
USP28-206ENST00000538224 TRIM61Q5EBN2 209 aa5.94□□□□□ -1.46
USP28-206ENST00000538224 BCL2L15Q5TBC7 163 aa5.94□□□□□ -1.46
USP28-206ENST00000538224 METTL11BQ5VVY1 283 aa5.94□□□□□ -1.46
USP28-206ENST00000538224 OR7E24Q6IFN5 339 aa5.94□□□□□ -1.46
USP28-206ENST00000538224 ANKRD16Q6P6B7 361 aa5.94□□□□□ -1.46
USP28-206ENST00000538224 FAM198BQ6UWH4 519 aa5.94□□□□□ -1.46
USP28-206ENST00000538224 LRRC69Q6ZNQ3 347 aa5.94□□□□□ -1.46
USP28-206ENST00000538224 FCRLAQ7L513 359 aa5.94□□□□□ -1.46
USP28-206ENST00000538224 NDUFAF7Q7L592 441 aa5.94□□□□□ -1.46
USP28-206ENST00000538224 SYT9Q86SS6 491 aa5.94□□□□□ -1.46
USP28-206ENST00000538224 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.94□□□□□ -1.46
USP28-206ENST00000538224 C1orf210Q8IVY1 113 aa5.94□□□□□ -1.46
USP28-206ENST00000538224 GTPBP8Q8N3Z3 284 aaPredicted RBP5.94□□□□□ -1.46
USP28-206ENST00000538224 OR10G3Q8NGC4 313 aa5.94□□□□□ -1.46
USP28-206ENST00000538224 OR6M1Q8NGM8 313 aa5.94□□□□□ -1.46
USP28-206ENST00000538224 OR13C3Q8NGS6 347 aa5.94□□□□□ -1.46
USP28-206ENST00000538224 OR2Y1Q8NGV0 311 aa5.94□□□□□ -1.46
USP28-206ENST00000538224 OR6X1Q8NH79 312 aa5.94□□□□□ -1.46
USP28-206ENST00000538224 MAFAQ8NHW3 353 aaPredicted RBP5.94□□□□□ -1.46
USP28-206ENST00000538224 ZFAND1Q8TCF1 268 aa5.94□□□□□ -1.46
USP28-206ENST00000538224 ST7LQ8TDW4 575 aa5.94□□□□□ -1.46
USP28-206ENST00000538224 RNF133Q8WVZ7 376 aa5.94□□□□□ -1.46
USP28-206ENST00000538224 GIMAP1Q8WWP7 306 aa5.94□□□□□ -1.46
USP28-206ENST00000538224 PMEPA1Q969W9 287 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms