RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 PYCR3Q53H96 274 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 PYDC2Q56P42 97 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 MESTQ5EB52 335 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 NCMAPQ5T1S8 102 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 AKR1C8PQ5T2L2 129 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 TMEM244Q5VVB8 128 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 CAPN13Q6MZZ7 669 aaPredicted RBP2.21□□□□□ -2.06
SKA3-207ENST00000536239 H3F3CQ6NXT2 135 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 GTF2H2CQ6P1K8 395 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 TBPL2Q6SJ96 375 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 LCLAT1Q6UWP7 414 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 ALKAL1Q6UXT8 129 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 SPATA31D1Q6ZQQ2 1576 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 ZCCHC23Q6ZST2 131 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 LANCL3Q6ZV70 420 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 TMEM179Q6ZVK1 233 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 MOB3CQ70IA8 216 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 AHSA2Q719I0 299 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 TMUB2Q71RG4 321 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 PLPPR4Q7Z2D5 763 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 ANKRD33Q7Z3H0 272 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 GRINAQ7Z429 371 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 ADGRA1Q86SQ6 560 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 BIVMQ86UB2 503 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 SLC47A2Q86VL8 602 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 UNC93AQ86WB7 457 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 IFNEQ86WN2 208 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 CBLN2Q8IUK8 224 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 TIAM2Q8IVF5 1701 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 FUNDC1Q8IVP5 155 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 FOXRED2Q8IWF2 684 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 BAP18Q8IXM2 172 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 RIMKLAQ8IXN7 391 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 SLC34A3Q8N130 599 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 DAW1Q8N136 415 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 FAM89BQ8N5H3 189 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 SPICQ8N5J4 248 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 ACBD7Q8N6N7 88 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 MRPL43Q8N983 215 aaKnown RBP2.21□□□□□ -2.06
SKA3-207ENST00000536239 OR8J3Q8NGG0 315 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 OR5L2Q8NGL0 311 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 OR4A15Q8NGL6 344 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 OR13C8Q8NGS7 320 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 OR10K1Q8NGX5 313 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 OR10R2Q8NGX6 335 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 OR2L2Q8NH16 312 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 OR51A7Q8NH64 312 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 OLIG1Q8TAK6 271 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 FGFBP3Q8TAT2 258 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 ZNF564Q8TBZ8 553 aaPredicted RBP2.21□□□□□ -2.06
SKA3-207ENST00000536239 ZNF596Q8TC21 504 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 RNASE8Q8TDE3 154 aaKnown RBP2.21□□□□□ -2.06
SKA3-207ENST00000536239 RNASEH2CQ8TDP1 164 aaKnown RBP2.21□□□□□ -2.06
SKA3-207ENST00000536239 TSEN15Q8WW01 171 aaKnown RBP2.21□□□□□ -2.06
SKA3-207ENST00000536239 PCNPQ8WW12 178 aaKnown RBP2.21□□□□□ -2.06
SKA3-207ENST00000536239 KCNE4Q8WWG9 221 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 ASB13Q8WXK3 278 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 TFGQ92734 400 aaPredicted RBP2.21□□□□□ -2.06
SKA3-207ENST00000536239 TAAR8Q969N4 342 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 UPRTQ96BW1 309 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 ZBED6CLQ96FA7 236 aaPredicted RBP2.21□□□□□ -2.06
SKA3-207ENST00000536239 PHYHIPLQ96FC7 376 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 SMARCD1Q96GM5 515 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 DIRAS2Q96HU8 199 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 SMIM8Q96KF7 97 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 POM121L2Q96KW2 1035 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 FOXN4Q96NZ1 517 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 TAAR6Q96RI8 345 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 SLC22A12Q96S37 553 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 ZNF382Q96SR6 550 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 MBOAT4Q96T53 435 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 PARK7Q99497 189 aaKnown RBP2.21□□□□□ -2.06
SKA3-207ENST00000536239 PHB2Q99623 299 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 NIPSNAP1Q9BPW8 284 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 HSD17B14Q9BPX1 270 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 SOSTQ9BQB4 213 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 C7orf50Q9BRJ6 194 aaKnown RBP2.21□□□□□ -2.06
SKA3-207ENST00000536239 ATG101Q9BSB4 218 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 WRAP53Q9BUR4 548 aaKnown RBP2.21□□□□□ -2.06
SKA3-207ENST00000536239 DDA1Q9BW61 102 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 SUCNR1Q9BXA5 334 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 SNHG12Q9BXW3 62 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 ANGPTL4Q9BY76 406 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 ACTR3CQ9C0K3 210 aaPredicted RBP2.21□□□□□ -2.06
SKA3-207ENST00000536239 ELOVL4Q9GZR5 314 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 WWTR1Q9GZV5 400 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 IL22Q9GZX6 179 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 OR2AG1Q9H205 316 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 OR10A4Q9H209 315 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 OR51J1Q9H342 316 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 FBXO44Q9H4M3 255 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 ACTL8Q9H568 366 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 ANKRA2Q9H9E1 313 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 CHODLQ9H9P2 273 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 PLEKHA2Q9HB19 425 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 MID1IP1Q9NPA3 183 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 MYNNQ9NPC7 610 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.21□□□□□ -2.06
SKA3-207ENST00000536239 SPHK2Q9NRA0 654 aa2.21□□□□□ -2.06
SKA3-207ENST00000536239 CHRAC1Q9NRG0 131 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms