RNA–Protein interactions for RNA: ENST00000535897.1

CHFR-211, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-211ENST00000535897 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.78□□□□□ -1.32
CHFR-211ENST00000535897 CGGBP1Q9UFW8 167 aaPredicted RBP6.78□□□□□ -1.32
CHFR-211ENST00000535897 ZNF229Q9UJW7 825 aa6.78□□□□□ -1.32
CHFR-211ENST00000535897 WNK1Q9H4A3 2382 aa6.77□□□□□ -1.32
CHFR-211ENST00000535897 CMYA5Q8N3K9 4069 aa6.77□□□□□ -1.33
CHFR-211ENST00000535897 LOC100509620A0A075B734 347 aa6.77□□□□□ -1.33
CHFR-211ENST00000535897 TRAV40A0A0B4J280 105 aa6.77□□□□□ -1.33
CHFR-211ENST00000535897 MDFIC2A0A1B0GVS7 189 aa6.77□□□□□ -1.33
CHFR-211ENST00000535897 FAM181BA6NEQ2 426 aa6.77□□□□□ -1.33
CHFR-211ENST00000535897 TPST2O60704 377 aa6.77□□□□□ -1.33
CHFR-211ENST00000535897 FMO6PO60774 539 aa6.77□□□□□ -1.33
CHFR-211ENST00000535897 OPN1SWP03999 348 aa6.77□□□□□ -1.33
CHFR-211ENST00000535897 F13BP05160 661 aa6.77□□□□□ -1.33
CHFR-211ENST00000535897 ADH4P08319 380 aa6.77□□□□□ -1.33
CHFR-211ENST00000535897 RPS2P15880 293 aaKnown RBP6.77□□□□□ -1.33
CHFR-211ENST00000535897 TNFRSF1AP19438 455 aa6.77□□□□□ -1.33
CHFR-211ENST00000535897 PPIBP23284 216 aaKnown RBP6.77□□□□□ -1.33
CHFR-211ENST00000535897 RBMXP38159 391 aaKnown RBP6.77□□□□□ -1.33
CHFR-211ENST00000535897 DAP3P51398 398 aaKnown RBP6.77□□□□□ -1.33
CHFR-211ENST00000535897 ARHGDIAP52565 204 aa6.77□□□□□ -1.33
CHFR-211ENST00000535897 RAG2P55895 527 aa6.77□□□□□ -1.33
CHFR-211ENST00000535897 BTG1P62324 171 aa6.77□□□□□ -1.33
CHFR-211ENST00000535897 ERVK-25P63136 954 aa6.77□□□□□ -1.33
CHFR-211ENST00000535897 CD47Q08722 323 aa6.77□□□□□ -1.33
CHFR-211ENST00000535897 MPP2Q14168 576 aa6.77□□□□□ -1.33
CHFR-211ENST00000535897 ZMYND11Q15326 602 aa6.77□□□□□ -1.33
CHFR-211ENST00000535897 TMEM155Q4W5P6 130 aa6.77□□□□□ -1.33
CHFR-211ENST00000535897 MTX3Q5HYI7 312 aa6.77□□□□□ -1.33
CHFR-211ENST00000535897 TMEM255AQ5JRV8 349 aa6.77□□□□□ -1.33
CHFR-211ENST00000535897 ENTPD8Q5MY95 495 aa6.77□□□□□ -1.33
CHFR-211ENST00000535897 MBNL2Q5VZF2 373 aaKnown RBP6.77□□□□□ -1.33
CHFR-211ENST00000535897 C16orf87Q6PH81 154 aa6.77□□□□□ -1.33
CHFR-211ENST00000535897 ARL9Q6T311 187 aa6.77□□□□□ -1.33
CHFR-211ENST00000535897 HDDC2Q7Z4H3 204 aa6.77□□□□□ -1.33
CHFR-211ENST00000535897 ZER1Q7Z7L7 766 aa6.77□□□□□ -1.33
CHFR-211ENST00000535897 ALDH16A1Q8IZ83 802 aa6.77□□□□□ -1.33
CHFR-211ENST00000535897 C10orf111Q8N326 155 aa6.77□□□□□ -1.33
CHFR-211ENST00000535897 OR2Z1Q8NG97 314 aa6.77□□□□□ -1.33
CHFR-211ENST00000535897 OR4F5Q8NH21 305 aa6.77□□□□□ -1.33
CHFR-211ENST00000535897 WFDC12Q8WWY7 111 aa6.77□□□□□ -1.33
CHFR-211ENST00000535897 NSMAFQ92636 917 aa6.77□□□□□ -1.33
CHFR-211ENST00000535897 POM121L2Q96KW2 1035 aa6.77□□□□□ -1.33
CHFR-211ENST00000535897 OR52B2Q96RD2 323 aa6.77□□□□□ -1.33
CHFR-211ENST00000535897 EVA1AQ9H8M9 152 aa6.77□□□□□ -1.33
CHFR-211ENST00000535897 SIAEQ9HAT2 523 aa6.77□□□□□ -1.33
CHFR-211ENST00000535897 SLCO1B3Q9NPD5 702 aa6.77□□□□□ -1.33
CHFR-211ENST00000535897 THAP1Q9NVV9 213 aa6.77□□□□□ -1.33
CHFR-211ENST00000535897 SLC25A37Q9NYZ2 338 aa6.77□□□□□ -1.33
CHFR-211ENST00000535897 PDP1Q9P0J1 537 aaPredicted RBP6.77□□□□□ -1.33
CHFR-211ENST00000535897 SLC7A7Q9UM01 511 aa6.77□□□□□ -1.33
CHFR-211ENST00000535897 ANGPT4Q9Y264 503 aa6.77□□□□□ -1.33
CHFR-211ENST00000535897 SOX21Q9Y651 276 aaPredicted RBP6.77□□□□□ -1.33
CHFR-211ENST00000535897 A0A1B0GUS0 222 aa6.76□□□□□ -1.33
CHFR-211ENST00000535897 EVPLLA8MZ36 301 aa6.76□□□□□ -1.33
CHFR-211ENST00000535897 TIMM23O14925 209 aa6.76□□□□□ -1.33
CHFR-211ENST00000535897 MGRN1O60291 552 aa6.76□□□□□ -1.33
CHFR-211ENST00000535897 NGFP01138 241 aa6.76□□□□□ -1.33
CHFR-211ENST00000535897 CD55P08174 381 aa6.76□□□□□ -1.33
CHFR-211ENST00000535897 ACADSP16219 412 aa6.76□□□□□ -1.33
CHFR-211ENST00000535897 GSTM3P21266 225 aa6.76□□□□□ -1.33
CHFR-211ENST00000535897 CD80P33681 288 aa6.76□□□□□ -1.33
CHFR-211ENST00000535897 MDH2P40926 338 aaKnown RBP6.76□□□□□ -1.33
CHFR-211ENST00000535897 GNB2P62879 340 aa6.76□□□□□ -1.33
CHFR-211ENST00000535897 MRPS34P82930 218 aaKnown RBP6.76□□□□□ -1.33
CHFR-211ENST00000535897 PSG4Q00888 419 aa6.76□□□□□ -1.33
CHFR-211ENST00000535897 FMODQ06828 376 aa6.76□□□□□ -1.33
CHFR-211ENST00000535897 RPL18Q07020 188 aaKnown RBP6.76□□□□□ -1.33
CHFR-211ENST00000535897 HIST3H3Q16695 136 aa6.76□□□□□ -1.33
CHFR-211ENST00000535897 CYP51A1Q16850 503 aa6.76□□□□□ -1.33
CHFR-211ENST00000535897 TUSC1Q2TAM9 212 aa6.76□□□□□ -1.33
CHFR-211ENST00000535897 ZNF362Q5T0B9 420 aaPredicted RBP6.76□□□□□ -1.33
CHFR-211ENST00000535897 FIP1L1Q6UN15 594 aaKnown RBP6.76□□□□□ -1.33
CHFR-211ENST00000535897 LRRN1Q6UXK5 716 aa6.76□□□□□ -1.33
CHFR-211ENST00000535897 LINC00114Q6XXX2 140 aa6.76□□□□□ -1.33
CHFR-211ENST00000535897 BRD3OSQ6XYD6 125 aa6.76□□□□□ -1.33
CHFR-211ENST00000535897 LRRC28Q86X40 367 aaPredicted RBP6.76□□□□□ -1.33
CHFR-211ENST00000535897 MSRB3Q8IXL7 192 aa6.76□□□□□ -1.33
CHFR-211ENST00000535897 C1orf174Q8IYL3 243 aa6.76□□□□□ -1.33
CHFR-211ENST00000535897 MUC20Q8N307 709 aaPredicted RBP6.76□□□□□ -1.33
CHFR-211ENST00000535897 OR6T1Q8NGN1 323 aa6.76□□□□□ -1.33
CHFR-211ENST00000535897 ADAMTS16Q8TE57 1224 aa6.76□□□□□ -1.33
CHFR-211ENST00000535897 AENQ8WTP8 325 aaKnown RBP6.76□□□□□ -1.33
CHFR-211ENST00000535897 ASB10Q8WXI3 467 aa6.76□□□□□ -1.33
CHFR-211ENST00000535897 THOC1Q96FV9 657 aaKnown RBP6.76□□□□□ -1.33
CHFR-211ENST00000535897 MAELQ96JY0 434 aaKnown RBP6.76□□□□□ -1.33
CHFR-211ENST00000535897 TMEM109Q9BVC6 243 aa6.76□□□□□ -1.33
CHFR-211ENST00000535897 SSBP3Q9BWW4 388 aaPredicted RBP6.76□□□□□ -1.33
CHFR-211ENST00000535897 MMP27Q9H306 513 aa6.76□□□□□ -1.33
CHFR-211ENST00000535897 MARCH7Q9H992 704 aa6.76□□□□□ -1.33
CHFR-211ENST00000535897 ELOVL3Q9HB03 270 aa6.76□□□□□ -1.33
CHFR-211ENST00000535897 SLAMF8Q9P0V8 285 aa6.76□□□□□ -1.33
CHFR-211ENST00000535897 STX18Q9P2W9 335 aaKnown RBP6.76□□□□□ -1.33
CHFR-211ENST00000535897 CORO2BQ9UQ03 480 aa6.76□□□□□ -1.33
CHFR-211ENST00000535897 PPP1R3CQ9UQK1 317 aa6.76□□□□□ -1.33
CHFR-211ENST00000535897 LRCH1Q9Y2L9 728 aa6.76□□□□□ -1.33
CHFR-211ENST00000535897 POLR3KQ9Y2Y1 108 aaPredicted RBP6.76□□□□□ -1.33
CHFR-211ENST00000535897 MMP24Q9Y5R2 645 aa6.76□□□□□ -1.33
CHFR-211ENST00000535897 NBEAL2Q6ZNJ1 2754 aa6.76□□□□□ -1.33
CHFR-211ENST00000535897 A0A1W2PPL8 197 aa6.75□□□□□ -1.33
CHFR-211ENST00000535897 TRAPPC13A5PLN9 417 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms