RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 ALG12Q9BV10 488 aa9.5□□□□□ -0.89
CLSTN3-206ENST00000535668 TXNIPQ9H3M7 391 aa9.5□□□□□ -0.89
CLSTN3-206ENST00000535668 PRDM13Q9H4Q3 707 aa9.5□□□□□ -0.89
CLSTN3-206ENST00000535668 ESM1Q9NQ30 184 aa9.5□□□□□ -0.89
CLSTN3-206ENST00000535668 TBCCD1Q9NVR7 557 aa9.5□□□□□ -0.89
CLSTN3-206ENST00000535668 HIF3AQ9Y2N7 669 aa9.5□□□□□ -0.89
CLSTN3-206ENST00000535668 NDUFAF1Q9Y375 327 aa9.5□□□□□ -0.89
CLSTN3-206ENST00000535668 A0A1B0GWJ7 208 aa9.49□□□□□ -0.89
CLSTN3-206ENST00000535668 A0A1W2PRG6 482 aa9.49□□□□□ -0.89
CLSTN3-206ENST00000535668 C11orf98E9PRG8 122 aa9.49□□□□□ -0.89
CLSTN3-206ENST00000535668 AHCYL1O43865 530 aa9.49□□□□□ -0.89
CLSTN3-206ENST00000535668 FOXH1O75593 365 aa9.49□□□□□ -0.89
CLSTN3-206ENST00000535668 TRMUO75648 421 aaKnown RBP9.49□□□□□ -0.89
CLSTN3-206ENST00000535668 IGHV2-70P01814 119 aa9.49□□□□□ -0.89
CLSTN3-206ENST00000535668 CST2P09228 141 aa9.49□□□□□ -0.89
CLSTN3-206ENST00000535668 FAM157BP0CG42 384 aa9.49□□□□□ -0.89
CLSTN3-206ENST00000535668 AQP1P29972 269 aa9.49□□□□□ -0.89
CLSTN3-206ENST00000535668 APLNRP35414 380 aa9.49□□□□□ -0.89
CLSTN3-206ENST00000535668 ERVS71-1P61550 626 aa9.49□□□□□ -0.89
CLSTN3-206ENST00000535668 UBA52P62987 128 aaKnown RBP9.49□□□□□ -0.89
CLSTN3-206ENST00000535668 ACTG1P63261 375 aa9.49□□□□□ -0.89
CLSTN3-206ENST00000535668 VMACQ2NL98 169 aa9.49□□□□□ -0.89
CLSTN3-206ENST00000535668 PABPC1L2AQ5JQF8 200 aa9.49□□□□□ -0.89
CLSTN3-206ENST00000535668 DCAF12L2Q5VW00 463 aa9.49□□□□□ -0.89
CLSTN3-206ENST00000535668 FAM205BPQ63HN1 556 aa9.49□□□□□ -0.89
CLSTN3-206ENST00000535668 NANOGNBQ7Z5D8 188 aa9.49□□□□□ -0.89
CLSTN3-206ENST00000535668 ZER1Q7Z7L7 766 aa9.49□□□□□ -0.89
CLSTN3-206ENST00000535668 CALHM3Q86XJ0 350 aa9.49□□□□□ -0.89
CLSTN3-206ENST00000535668 RBM45Q8IUH3 476 aaKnown RBP9.49□□□□□ -0.89
CLSTN3-206ENST00000535668 C10orf53Q8N6V4 93 aa9.49□□□□□ -0.89
CLSTN3-206ENST00000535668 ZNF283Q8N7M2 679 aa9.49□□□□□ -0.89
CLSTN3-206ENST00000535668 DEFB108BQ8NET1 73 aa9.49□□□□□ -0.89
CLSTN3-206ENST00000535668 RNF217Q8TC41 542 aa9.49□□□□□ -0.89
CLSTN3-206ENST00000535668 DACT3Q96B18 629 aaPredicted RBP9.49□□□□□ -0.89
CLSTN3-206ENST00000535668 SAMD8Q96LT4 415 aa9.49□□□□□ -0.89
CLSTN3-206ENST00000535668 ZNF347Q96SE7 839 aa9.49□□□□□ -0.89
CLSTN3-206ENST00000535668 GPA33Q99795 319 aa9.49□□□□□ -0.89
CLSTN3-206ENST00000535668 SIKE1Q9BRV8 207 aa9.49□□□□□ -0.89
CLSTN3-206ENST00000535668 EGLN1Q9GZT9 426 aa9.49□□□□□ -0.89
CLSTN3-206ENST00000535668 NANOGQ9H9S0 305 aa9.49□□□□□ -0.89
CLSTN3-206ENST00000535668 INIPQ9NRY2 104 aa9.49□□□□□ -0.89
CLSTN3-206ENST00000535668 DECR2Q9NUI1 292 aa9.49□□□□□ -0.89
CLSTN3-206ENST00000535668 MRGBPQ9NV56 204 aa9.49□□□□□ -0.89
CLSTN3-206ENST00000535668 SLC7A7Q9UM01 511 aa9.49□□□□□ -0.89
CLSTN3-206ENST00000535668 FZR1Q9UM11 496 aa9.49□□□□□ -0.89
CLSTN3-206ENST00000535668 POM121CA8CG34 1229 aa9.48□□□□□ -0.89
CLSTN3-206ENST00000535668 F5H0A9 414 aaPredicted RBP9.48□□□□□ -0.89
CLSTN3-206ENST00000535668 IFNL4K9M1U5 179 aa9.48□□□□□ -0.89
CLSTN3-206ENST00000535668 OR7A10O76100 309 aa9.48□□□□□ -0.89
CLSTN3-206ENST00000535668 PRSS23O95084 383 aa9.48□□□□□ -0.89
CLSTN3-206ENST00000535668 LCKP06239 509 aa9.48□□□□□ -0.89
CLSTN3-206ENST00000535668 CCL2P13500 99 aa9.48□□□□□ -0.89
CLSTN3-206ENST00000535668 FUT1P19526 365 aa9.48□□□□□ -0.89
CLSTN3-206ENST00000535668 KITLGP21583 273 aa9.48□□□□□ -0.89
CLSTN3-206ENST00000535668 PRTN3P24158 256 aa9.48□□□□□ -0.89
CLSTN3-206ENST00000535668 SLC6A9P48067 706 aa9.48□□□□□ -0.89
CLSTN3-206ENST00000535668 CLRN1P58418 232 aa9.48□□□□□ -0.89
CLSTN3-206ENST00000535668 PCBD1P61457 104 aa9.48□□□□□ -0.89
CLSTN3-206ENST00000535668 PSG4Q00888 419 aa9.48□□□□□ -0.89
CLSTN3-206ENST00000535668 PAX2Q02962 417 aa9.48□□□□□ -0.89
CLSTN3-206ENST00000535668 FHL1Q13642 323 aa9.48□□□□□ -0.89
CLSTN3-206ENST00000535668 AGKQ53H12 422 aa9.48□□□□□ -0.89
CLSTN3-206ENST00000535668 DHDDSQ86SQ9 333 aa9.48□□□□□ -0.89
CLSTN3-206ENST00000535668 LRRC28Q86X40 367 aaPredicted RBP9.48□□□□□ -0.89
CLSTN3-206ENST00000535668 TREML1Q86YW5 311 aa9.48□□□□□ -0.89
CLSTN3-206ENST00000535668 ALDH16A1Q8IZ83 802 aa9.48□□□□□ -0.89
CLSTN3-206ENST00000535668 OR8J3Q8NGG0 315 aa9.48□□□□□ -0.89
CLSTN3-206ENST00000535668 OR1J1Q8NGS3 322 aa9.48□□□□□ -0.89
CLSTN3-206ENST00000535668 LRRC8CQ8TDW0 803 aa9.48□□□□□ -0.89
CLSTN3-206ENST00000535668 SH3GL1Q99961 368 aa9.48□□□□□ -0.89
CLSTN3-206ENST00000535668 SLITRK2Q9H156 845 aa9.48□□□□□ -0.89
CLSTN3-206ENST00000535668 KCNN2Q9H2S1 579 aa9.48□□□□□ -0.89
CLSTN3-206ENST00000535668 C7orf69Q9H7B7 122 aa9.48□□□□□ -0.89
CLSTN3-206ENST00000535668 ELOVL3Q9HB03 270 aa9.48□□□□□ -0.89
CLSTN3-206ENST00000535668 LPAR2Q9HBW0 351 aa9.48□□□□□ -0.89
CLSTN3-206ENST00000535668 PLEK2Q9NYT0 353 aa9.48□□□□□ -0.89
CLSTN3-206ENST00000535668 EIF3KQ9UBQ5 218 aaKnown RBP9.48□□□□□ -0.89
CLSTN3-206ENST00000535668 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.48□□□□□ -0.89
CLSTN3-206ENST00000535668 ATPIF1Q9UII2 106 aa9.48□□□□□ -0.89
CLSTN3-206ENST00000535668 BAG5Q9UL15 447 aa9.48□□□□□ -0.89
CLSTN3-206ENST00000535668 TIMM10BQ9Y5J6 103 aa9.48□□□□□ -0.89
CLSTN3-206ENST00000535668 MMP24Q9Y5R2 645 aa9.48□□□□□ -0.89
CLSTN3-206ENST00000535668 PLSCR5A0PG75 271 aa9.47□□□□□ -0.89
CLSTN3-206ENST00000535668 ZSCAN5BA6NJL1 495 aa9.47□□□□□ -0.89
CLSTN3-206ENST00000535668 CPSF4LA6NMK7 179 aaKnown RBP9.47□□□□□ -0.89
CLSTN3-206ENST00000535668 BLOC1S5-TXNDC5H3BN57 136 aa9.47□□□□□ -0.89
CLSTN3-206ENST00000535668 TMPRSS2O15393 492 aa9.47□□□□□ -0.89
CLSTN3-206ENST00000535668 CDC14BO60729 498 aa9.47□□□□□ -0.89
CLSTN3-206ENST00000535668 RNASE1P07998 156 aaKnown RBP9.47□□□□□ -0.89
CLSTN3-206ENST00000535668 ZNF12P17014 697 aa9.47□□□□□ -0.89
CLSTN3-206ENST00000535668 ZNF32P17041 273 aa9.47□□□□□ -0.89
CLSTN3-206ENST00000535668 DRD4P21917 467 aa9.47□□□□□ -0.89
CLSTN3-206ENST00000535668 ZFP36P26651 326 aaKnown RBP9.47□□□□□ -0.89
CLSTN3-206ENST00000535668 GCH1P30793 250 aa9.47□□□□□ -0.89
CLSTN3-206ENST00000535668 PAX8Q06710 450 aa9.47□□□□□ -0.89
CLSTN3-206ENST00000535668 SELPLGQ14242 412 aa9.47□□□□□ -0.89
CLSTN3-206ENST00000535668 MELKQ14680 651 aa9.47□□□□□ -0.89
CLSTN3-206ENST00000535668 CYP51A1Q16850 503 aa9.47□□□□□ -0.89
CLSTN3-206ENST00000535668 SPICQ8N5J4 248 aa9.47□□□□□ -0.89
CLSTN3-206ENST00000535668 LRRC75AQ8NAA5 344 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms